RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 DNAJC25-GNG10A0A024R161 153 aa19.23■□□□□ 0.67
CLN6-208ENST00000567060 ESYT2A0FGR8 921 aa19.23■□□□□ 0.67
CLN6-208ENST00000567060 LARGE1O95461 756 aa19.23■□□□□ 0.67
CLN6-208ENST00000567060 XBP1P17861 261 aa19.23■□□□□ 0.67
CLN6-208ENST00000567060 SLC4A3P48751 1232 aa19.23■□□□□ 0.67
CLN6-208ENST00000567060 MCTP2Q6DN12 878 aa19.23■□□□□ 0.67
CLN6-208ENST00000567060 ZNF467Q7Z7K2 595 aaPredicted RBP19.23■□□□□ 0.67
CLN6-208ENST00000567060 A1CFQ9NQ94 594 aaKnown RBP19.23■□□□□ 0.67
CLN6-208ENST00000567060 HOMER2Q9NSB8 354 aa19.23■□□□□ 0.67
CLN6-208ENST00000567060 KIF3AQ9Y496 699 aa19.23■□□□□ 0.67
CLN6-208ENST00000567060 CDH23Q9H251 3354 aa19.23■□□□□ 0.67
CLN6-208ENST00000567060 PIK3CDO00329 1044 aa19.22■□□□□ 0.67
CLN6-208ENST00000567060 PKN1Q16512 942 aa19.22■□□□□ 0.67
CLN6-208ENST00000567060 MUM1L1Q5H9M0 696 aa19.22■□□□□ 0.67
CLN6-208ENST00000567060 RNF207Q6ZRF8 634 aa19.22■□□□□ 0.67
CLN6-208ENST00000567060 HEATR3Q7Z4Q2 680 aa19.22■□□□□ 0.67
CLN6-208ENST00000567060 DPP9Q86TI2 863 aa19.22■□□□□ 0.67
CLN6-208ENST00000567060 NSUN7Q8NE18 718 aaKnown RBP19.22■□□□□ 0.67
CLN6-208ENST00000567060 PHKBQ93100 1093 aa19.22■□□□□ 0.67
CLN6-208ENST00000567060 GUCD1Q96NT3 240 aa19.22■□□□□ 0.67
CLN6-208ENST00000567060 MPHOSPH6Q99547 160 aaKnown RBP19.22■□□□□ 0.67
CLN6-208ENST00000567060 CYP39A1Q9NYL5 469 aa19.22■□□□□ 0.67
CLN6-208ENST00000567060 ADD3Q9UEY8 706 aaKnown RBP19.22■□□□□ 0.67
CLN6-208ENST00000567060 B4DLN1 442 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 NFIBO00712 420 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 CTDNEP1O95476 244 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 HSD17B4P51659 736 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 MRPL12P52815 198 aaKnown RBP19.21■□□□□ 0.67
CLN6-208ENST00000567060 OLFML2BQ68BL8 750 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 WWC2Q6AWC2 1192 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 GALNT17Q6IS24 598 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 NSMFQ6X4W1 530 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 NECAB1Q8N987 351 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 DNERQ8NFT8 737 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 SMARCC2Q8TAQ2 1214 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 CUL5Q93034 780 aa19.21■□□□□ 0.67
CLN6-208ENST00000567060 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.21■□□□□ 0.67
CLN6-208ENST00000567060 PTPDC1A2A3K4 754 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 GCOM1H8Y6P7 765 aaPredicted RBP19.2■□□□□ 0.66
CLN6-208ENST00000567060 K7ELQ4 463 aaPredicted RBP19.2■□□□□ 0.66
CLN6-208ENST00000567060 STXBP3O00186 592 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 CD2BP2O95400 341 aaKnown RBP19.2■□□□□ 0.66
CLN6-208ENST00000567060 POLR2MP0CAP2 368 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 GNA11P29992 359 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 NAPAP54920 295 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 RPS6P62753 249 aaKnown RBP19.2■□□□□ 0.66
CLN6-208ENST00000567060 ZNF792Q3KQV3 632 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 FAM109BQ6ICB4 259 aaPredicted RBP19.2■□□□□ 0.66
CLN6-208ENST00000567060 CCDC83Q8IWF9 413 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 HSCBQ8IWL3 235 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 FAM133AQ8N9E0 248 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 BICD2Q8TD16 824 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 PIBF1Q8WXW3 757 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 PSTPIP2Q9H939 334 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 FLRT1Q9NZU1 646 aa19.2■□□□□ 0.66
CLN6-208ENST00000567060 ORC3Q9UBD5 711 aaPredicted RBP19.2■□□□□ 0.66
CLN6-208ENST00000567060 ST3GAL1Q11201 340 aa19.19■□□□□ 0.66
CLN6-208ENST00000567060 CUL4AQ13619 759 aa19.19■□□□□ 0.66
CLN6-208ENST00000567060 BAATQ14032 418 aaPredicted RBP19.19■□□□□ 0.66
CLN6-208ENST00000567060 INTS4Q96HW7 963 aaKnown RBP19.19■□□□□ 0.66
CLN6-208ENST00000567060 ZMYND12Q9H0C1 365 aa19.19■□□□□ 0.66
CLN6-208ENST00000567060 C6orf50Q9HD87 102 aa19.19■□□□□ 0.66
CLN6-208ENST00000567060 RIC8AQ9NPQ8 531 aa19.19■□□□□ 0.66
CLN6-208ENST00000567060 NRBP1Q9UHY1 535 aa19.19■□□□□ 0.66
CLN6-208ENST00000567060 PLXNA1Q9UIW2 1896 aa19.18■□□□□ 0.66
CLN6-208ENST00000567060 hCG_1642624A0A1W2PR95 340 aa19.18■□□□□ 0.66
CLN6-208ENST00000567060 ASB14A6NK59 587 aa19.18■□□□□ 0.66
CLN6-208ENST00000567060 OPLAHO14841 1288 aa19.18■□□□□ 0.66
CLN6-208ENST00000567060 COBLO75128 1261 aa19.18■□□□□ 0.66
CLN6-208ENST00000567060 CALML3P27482 149 aa19.18■□□□□ 0.66
CLN6-208ENST00000567060 MAMDC4Q6UXC1 1216 aa19.18■□□□□ 0.66
CLN6-208ENST00000567060 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.18■□□□□ 0.66
CLN6-208ENST00000567060 GPKOWQ92917 476 aaPredicted RBP eCLIP19.18■□□□□ 0.66
CLN6-208ENST00000567060 SENP6Q9GZR1 1112 aaPredicted RBP19.18■□□□□ 0.66
CLN6-208ENST00000567060 CFBP00751 764 aa19.17■□□□□ 0.66
CLN6-208ENST00000567060 FOSP01100 380 aaPredicted RBP19.17■□□□□ 0.66
CLN6-208ENST00000567060 ADCY7P51828 1080 aa19.17■□□□□ 0.66
CLN6-208ENST00000567060 AP3B2Q13367 1082 aa19.17■□□□□ 0.66
CLN6-208ENST00000567060 SYTL5Q8TDW5 730 aaPredicted RBP19.17■□□□□ 0.66
CLN6-208ENST00000567060 MAML3Q96JK9 1138 aa19.17■□□□□ 0.66
CLN6-208ENST00000567060 FAM161BQ96MY7 647 aa19.17■□□□□ 0.66
CLN6-208ENST00000567060 IWS1Q96ST2 819 aa19.17■□□□□ 0.66
CLN6-208ENST00000567060 SYNGAP1Q96PV0 1343 aa19.17■□□□□ 0.66
CLN6-208ENST00000567060 SMCO2A6NFE2 343 aa19.16■□□□□ 0.66
CLN6-208ENST00000567060 IGHA2P01877 340 aa19.16■□□□□ 0.66
CLN6-208ENST00000567060 MFSD14CQ5VZR4 134 aa19.16■□□□□ 0.66
CLN6-208ENST00000567060 DAGLBQ8NCG7 672 aa19.16■□□□□ 0.66
CLN6-208ENST00000567060 NSUN6Q8TEA1 469 aaKnown RBP19.16■□□□□ 0.66
CLN6-208ENST00000567060 EHMT1Q9H9B1 1298 aa19.16■□□□□ 0.66
CLN6-208ENST00000567060 MEIS2O14770 477 aa19.15■□□□□ 0.66
CLN6-208ENST00000567060 PGK2P07205 417 aa19.15■□□□□ 0.66
CLN6-208ENST00000567060 FDPSP14324 419 aaKnown RBP19.15■□□□□ 0.66
CLN6-208ENST00000567060 TYW1BQ6NUM6 668 aa19.15■□□□□ 0.66
CLN6-208ENST00000567060 SLC30A10Q6XR72 485 aa19.15■□□□□ 0.66
CLN6-208ENST00000567060 FAM184AQ8NB25 1140 aa19.15■□□□□ 0.66
CLN6-208ENST00000567060 NPLOC4Q8TAT6 608 aa19.15■□□□□ 0.66
CLN6-208ENST00000567060 MORC4Q8TE76 937 aa19.15■□□□□ 0.66
CLN6-208ENST00000567060 ALG1Q9BT22 464 aa19.15■□□□□ 0.66
CLN6-208ENST00000567060 SPDYE3A6NKU9 549 aa19.14■□□□□ 0.65
CLN6-208ENST00000567060 TAL1P17542 331 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms