RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 RPUSD2Q8IZ73 545 aaKnown RBP13.96□□□□□ -0.17
UBR1-206ENST00000566493 ANKS1AQ92625 1134 aa13.96□□□□□ -0.17
UBR1-206ENST00000566493 PHF12Q96QT6 1004 aa13.96□□□□□ -0.17
UBR1-206ENST00000566493 MTG1Q9BT17 334 aaPredicted RBP13.96□□□□□ -0.17
UBR1-206ENST00000566493 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.17
UBR1-206ENST00000566493 ABCB11O95342 1321 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 KPNA6O60684 536 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 PARP1P09874 1014 aaKnown RBP13.95□□□□□ -0.18
UBR1-206ENST00000566493 SUPT20HL2P0C7V6 817 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 CCL23P55773 120 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 TTLL4Q14679 1199 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 CDC37Q16543 378 aaPredicted RBP13.95□□□□□ -0.18
UBR1-206ENST00000566493 HERVK_113Q902F9 699 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 UBAC1Q9BSL1 405 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 NOC4LQ9BVI4 516 aaKnown RBP13.95□□□□□ -0.18
UBR1-206ENST00000566493 MAF1Q9H063 256 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 ALDH8A1Q9H2A2 487 aaPredicted RBP13.95□□□□□ -0.18
UBR1-206ENST00000566493 TSPYL2Q9H2G4 693 aaPredicted RBP13.95□□□□□ -0.18
UBR1-206ENST00000566493 CPVLQ9H3G5 476 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 ZNF576Q9H609 170 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 ZSWIM5Q9P217 1185 aa13.95□□□□□ -0.18
UBR1-206ENST00000566493 GRXCR1A8MXD5 290 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 TXNP10599 105 aaKnown RBP13.94□□□□□ -0.18
UBR1-206ENST00000566493 EDNRBP24530 442 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 PURAQ00577 322 aaKnown RBP13.94□□□□□ -0.18
UBR1-206ENST00000566493 GRIN2CQ14957 1233 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 RAB30Q15771 203 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 FAM47CQ5HY64 1035 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 RASIP1Q5U651 963 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 MCF2L2Q86YR7 1114 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 ENAHQ8N8S7 591 aaPredicted RBP13.94□□□□□ -0.18
UBR1-206ENST00000566493 VAT1LQ9HCJ6 419 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 MSRAQ9UJ68 235 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 MRPL11Q9Y3B7 192 aaKnown RBP13.94□□□□□ -0.18
UBR1-206ENST00000566493 MYH6P13533 1939 aa13.94□□□□□ -0.18
UBR1-206ENST00000566493 TNKSO95271 1327 aa13.93□□□□□ -0.18
UBR1-206ENST00000566493 UMODL1Q5DID0 1318 aa13.93□□□□□ -0.18
UBR1-206ENST00000566493 A0A0C4DFX4 3053 aa13.93□□□□□ -0.18
UBR1-206ENST00000566493 PBX2P40425 430 aa13.93□□□□□ -0.18
UBR1-206ENST00000566493 IFIT1BQ5T764 474 aaKnown RBP13.93□□□□□ -0.18
UBR1-206ENST00000566493 OTOP2Q7RTS6 562 aa13.93□□□□□ -0.18
UBR1-206ENST00000566493 FBXO11Q86XK2 927 aa13.93□□□□□ -0.18
UBR1-206ENST00000566493 NSUN6Q8TEA1 469 aaKnown RBP13.93□□□□□ -0.18
UBR1-206ENST00000566493 PBX4Q9BYU1 374 aa13.93□□□□□ -0.18
UBR1-206ENST00000566493 TRMT13Q9NUP7 481 aaKnown RBP13.93□□□□□ -0.18
UBR1-206ENST00000566493 A6NJR5 290 aa13.92□□□□□ -0.18
UBR1-206ENST00000566493 TRDNQ13061 729 aa13.92□□□□□ -0.18
UBR1-206ENST00000566493 QRICH1Q2TAL8 776 aa13.92□□□□□ -0.18
UBR1-206ENST00000566493 NBPF20Q3BBV1 942 aa13.92□□□□□ -0.18
UBR1-206ENST00000566493 SEPT14Q6ZU15 432 aa13.92□□□□□ -0.18
UBR1-206ENST00000566493 SYTL5Q8TDW5 730 aaPredicted RBP13.92□□□□□ -0.18
UBR1-206ENST00000566493 RUFY2Q8WXA3 655 aa13.92□□□□□ -0.18
UBR1-206ENST00000566493 COPS5Q92905 334 aa13.92□□□□□ -0.18
UBR1-206ENST00000566493 IWS1Q96ST2 819 aa13.92□□□□□ -0.18
UBR1-206ENST00000566493 GAS2L1Q99501 681 aaPredicted RBP13.92□□□□□ -0.18
UBR1-206ENST00000566493 COL25A1Q9BXS0 654 aaPredicted RBP13.92□□□□□ -0.18
UBR1-206ENST00000566493 WNT8AQ9H1J5 351 aa13.92□□□□□ -0.18
UBR1-206ENST00000566493 UNC80Q8N2C7 3258 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 PFKMP08237 780 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 CYP2C9P11712 490 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 CHMP4BP1P59074 171 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 PTPN11Q06124 597 aaPredicted RBP13.91□□□□□ -0.18
UBR1-206ENST00000566493 STXBP2Q15833 593 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 ARHGEF16Q5VV41 709 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 NFRKBQ6P4R8 1299 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 RETREG2Q8NC44 543 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 TBC1D5Q92609 795 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 SCLYQ96I15 445 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 TAAR1Q96RJ0 339 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 RMDN3Q96TC7 470 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 AMNQ9BXJ7 453 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 JMJD4Q9H9V9 463 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 CXXC1Q9P0U4 656 aaPredicted RBP13.91□□□□□ -0.18
UBR1-206ENST00000566493 NOD1Q9Y239 953 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 SLC4A7Q9Y6M7 1214 aa13.91□□□□□ -0.18
UBR1-206ENST00000566493 ZBBXA8MT70 800 aa13.9□□□□□ -0.18
UBR1-206ENST00000566493 GH1P01241 217 aa13.9□□□□□ -0.18
UBR1-206ENST00000566493 TTC22Q5TAA0 569 aa13.9□□□□□ -0.18
UBR1-206ENST00000566493 SLC28A3Q9HAS3 691 aa13.9□□□□□ -0.18
UBR1-206ENST00000566493 SUPT16HQ9Y5B9 1047 aaKnown RBP13.9□□□□□ -0.18
UBR1-206ENST00000566493 EYSQ5T1H1 3165 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 ERICH2A1L162 156 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 KLRF2D3W0D1 207 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
UBR1-206ENST00000566493 ARIH2O95376 493 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 CFBP00751 764 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 ACTN1P12814 892 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 RFC2P35250 354 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 TRAF1Q13077 416 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 BFSP2Q13515 415 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 CCDC62Q6P9F0 684 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 CHST3Q7LGC8 479 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 DEFB128Q7Z7B8 93 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 AFG1LQ8WV93 481 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 NKX2-4Q9H2Z4 354 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 PRDM12Q9H4Q4 367 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 COL20A1Q9P218 1284 aa13.89□□□□□ -0.19
UBR1-206ENST00000566493 KIAA1217Q5T5P2 1943 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms