RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 RBPJLQ9UBG7 517 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 FBXO40Q9UH90 709 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 TESPA1A2RU30 521 aaPredicted RBP21.28■■□□□ 1
COMMD4-213ENST00000565834 LIG1P18858 919 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 CMA1P23946 247 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 MOXD1Q6UVY6 613 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 SLC30A10Q6XR72 485 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 CCDC73Q6ZRK6 1079 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 CCDC102AQ96A19 550 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 PTPN18Q99952 460 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 TMEM60Q9H2L4 133 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 TXNRD2Q9NNW7 524 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 COL20A1Q9P218 1284 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 DDX25Q9UHL0 483 aaKnown RBP21.28■■□□□ 1
COMMD4-213ENST00000565834 OR52Z1P0C646 297 aa21.27■■□□□ 1
COMMD4-213ENST00000565834 COPB2P35606 906 aa21.27■■□□□ 1
COMMD4-213ENST00000565834 CAVIN1Q6NZI2 390 aaKnown RBP21.27■■□□□ 1
COMMD4-213ENST00000565834 POTEDQ86YR6 584 aa21.27■■□□□ 1
COMMD4-213ENST00000565834 ZNF579Q8NAF0 562 aaKnown RBP21.27■■□□□ 1
COMMD4-213ENST00000565834 HHIPL1Q96JK4 782 aa21.27■■□□□ 1
COMMD4-213ENST00000565834 CYP3A7-CYP3A51PA0A087WV96 503 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 VWA3AA6NCI4 1184 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 SLC37A4O43826 429 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 SLC25A27O95847 323 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 CYP3A4P08684 503 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 CYP3A7P24462 503 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 PRPHP41219 470 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 GRIN1Q05586 938 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 BAATQ14032 418 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-213ENST00000565834 SHC4Q6S5L8 630 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 NCAPG2Q86XI2 1143 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 SYAP1Q96A49 352 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-213ENST00000565834 PARK7Q99497 189 aaKnown RBP21.26■□□□□ 0.99
COMMD4-213ENST00000565834 MOV10L1Q9BXT6 1211 aaKnown RBP21.26■□□□□ 0.99
COMMD4-213ENST00000565834 GOLPH3LQ9H4A5 285 aa21.26■□□□□ 0.99
COMMD4-213ENST00000565834 A1CFQ9NQ94 594 aaKnown RBP21.26■□□□□ 0.99
COMMD4-213ENST00000565834 CALCRLQ16602 461 aa21.25■□□□□ 0.99
COMMD4-213ENST00000565834 RESP18Q5W5W9 173 aa21.25■□□□□ 0.99
COMMD4-213ENST00000565834 CSRNP2Q9H175 543 aa21.25■□□□□ 0.99
COMMD4-213ENST00000565834 RPTORQ8N122 1335 aa21.25■□□□□ 0.99
COMMD4-213ENST00000565834 A0A1B0GVL5 298 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 CIITAP33076 1130 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 ZNF76P36508 570 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 GCLCP48506 637 aaPredicted RBP21.24■□□□□ 0.99
COMMD4-213ENST00000565834 ERVK-9P63128 1117 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 ERVK-24P63145 666 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 DTHD1Q6ZMT9 781 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 MBOAT7Q96N66 472 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 CYP39A1Q9NYL5 469 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 FAM155AB1AL88 458 aaPredicted RBP21.24■□□□□ 0.99
COMMD4-213ENST00000565834 ERCC3P19447 782 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 UBXN2AP68543 259 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 FAM160A1Q05DH4 1040 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 TAAR1Q96RJ0 339 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 DACT1Q9NYF0 836 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 LCTP09848 1927 aa21.24■□□□□ 0.99
COMMD4-213ENST00000565834 PFASO15067 1338 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 FRMPD4Q14CM0 1322 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 NR1I2O75469 434 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 PFKFB1P16118 471 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 INHBEP58166 350 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 IL17AQ16552 155 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 Q3C1V9 767 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 SPECC1Q5M775 1068 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 ANKRD35Q8N283 1001 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 GPRC5AQ8NFJ5 357 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 MTMR9Q96QG7 549 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 RMDN3Q96TC7 470 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 GZF1Q9H116 711 aaPredicted RBP21.23■□□□□ 0.99
COMMD4-213ENST00000565834 ZCCHC17Q9NP64 241 aaKnown RBP21.23■□□□□ 0.99
COMMD4-213ENST00000565834 FAM13BQ9NYF5 915 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 TMEM63CQ9P1W3 806 aa21.23■□□□□ 0.99
COMMD4-213ENST00000565834 LONP1P36776 959 aaKnown RBP21.22■□□□□ 0.99
COMMD4-213ENST00000565834 NDUFA8P51970 172 aa21.22■□□□□ 0.99
COMMD4-213ENST00000565834 Q4G0T1 1027 aa21.22■□□□□ 0.99
COMMD4-213ENST00000565834 PRR16Q569H4 304 aa21.22■□□□□ 0.99
COMMD4-213ENST00000565834 PAXIP1Q6ZW49 1069 aaPredicted RBP21.22■□□□□ 0.99
COMMD4-213ENST00000565834 PXMP2Q9NR77 195 aa21.22■□□□□ 0.99
COMMD4-213ENST00000565834 DDX19AQ9NUU7 478 aaKnown RBP21.22■□□□□ 0.99
COMMD4-213ENST00000565834 FAM237AA0A1B0GTK4 181 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 FAM86B1E9PN63 330 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 IGF2BP3O00425 579 aaKnown RBP eCLIP21.21■□□□□ 0.99
COMMD4-213ENST00000565834 MARCH6O60337 910 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 FAM86B2P0C5J1 330 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 EIF2AK2P19525 551 aaKnown RBP21.21■□□□□ 0.99
COMMD4-213ENST00000565834 CCNA1P78396 465 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 ARHGEF16Q5VV41 709 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 ANKRD13CQ8N6S4 541 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 SHCBP1Q8NEM2 672 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 ENGASEQ8NFI3 743 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 MROH8Q9H579 483 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 MORF4L1Q9UBU8 362 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 TXKP42681 527 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 SREBF2Q12772 1141 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 SNW1Q13573 536 aaKnown RBP21.21■□□□□ 0.99
COMMD4-213ENST00000565834 CCDC183Q5T5S1 534 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 PCNX4Q63HM2 1172 aa21.21■□□□□ 0.99
COMMD4-213ENST00000565834 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.21■□□□□ 0.99
COMMD4-213ENST00000565834 FMR1NBQ8N0W7 255 aaPredicted RBP21.21■□□□□ 0.99
COMMD4-213ENST00000565834 HPSEQ9Y251 543 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms