RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 TMOD4Q9NZQ9 345 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 LRWD1Q9UFC0 647 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 MYH7BA7E2Y1 1941 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 HMGCS2P54868 508 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 VGLL4Q14135 290 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 Q4G0T1 1027 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 ISM2Q6H9L7 571 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 DHX40Q8IX18 779 aaKnown RBP22.07■■□□□ 1.12
CLN6-205ENST00000564846 SLFN12Q8IYM2 578 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 GSDMAQ96QA5 445 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 CTDP1Q9Y5B0 961 aaPredicted RBP22.07■■□□□ 1.12
CLN6-205ENST00000564846 CSADQ9Y600 493 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 SNCAIPQ9Y6H5 919 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 TBX3O15119 743 aa22.06■■□□□ 1.12
CLN6-205ENST00000564846 ADCY5O95622 1261 aa22.06■■□□□ 1.12
CLN6-205ENST00000564846 IREB2P48200 963 aaKnown RBP22.06■■□□□ 1.12
CLN6-205ENST00000564846 FCHSD1Q86WN1 690 aa22.06■■□□□ 1.12
CLN6-205ENST00000564846 KCNMB3Q9NPA1 279 aa22.06■■□□□ 1.12
CLN6-205ENST00000564846 GTPBP6O43824 516 aaPredicted RBP22.05■■□□□ 1.12
CLN6-205ENST00000564846 MYL1P05976 194 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 PLCB2Q00722 1185 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 MORC3Q14149 939 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 NAALADL2Q58DX5 795 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 SH3D19Q5HYK7 790 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 DLK2Q6UY11 383 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 MCF2L2Q86YR7 1114 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 SAMD3Q8N6K7 520 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 MLKLQ8NB16 471 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 TBC1D5Q92609 795 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 TRIM44Q96DX7 344 aaPredicted RBP22.05■■□□□ 1.12
CLN6-205ENST00000564846 CALML4Q96GE6 196 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 TAF1DQ9H5J8 278 aaPredicted RBP22.05■■□□□ 1.12
CLN6-205ENST00000564846 DACH1Q9UI36 760 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 PCDHA12Q9UN75 941 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 PHIPQ8WWQ0 1821 aa22.05■■□□□ 1.12
CLN6-205ENST00000564846 SMTNL1A8MU46 457 aa22.04■■□□□ 1.12
CLN6-205ENST00000564846 GHRHRQ02643 423 aa22.04■■□□□ 1.12
CLN6-205ENST00000564846 AOPEPQ8N6M6 819 aa22.04■■□□□ 1.12
CLN6-205ENST00000564846 CDCA5Q96FF9 252 aa22.04■■□□□ 1.12
CLN6-205ENST00000564846 MMTAG2Q9BU76 263 aaKnown RBP22.04■■□□□ 1.12
CLN6-205ENST00000564846 MAP3K20Q9NYL2 800 aaKnown RBP22.04■■□□□ 1.12
CLN6-205ENST00000564846 VWA5AO00534 786 aa22.04■■□□□ 1.12
CLN6-205ENST00000564846 HSD17B4P51659 736 aa22.04■■□□□ 1.12
CLN6-205ENST00000564846 PNMA8AQ86V59 439 aaPredicted RBP22.04■■□□□ 1.12
CLN6-205ENST00000564846 CPXCR1Q8N123 301 aa22.04■■□□□ 1.12
CLN6-205ENST00000564846 MTRQ99707 1265 aa22.04■■□□□ 1.12
CLN6-205ENST00000564846 RAVER2Q9HCJ3 691 aaKnown RBP22.04■■□□□ 1.12
CLN6-205ENST00000564846 IKBKBO14920 756 aa22.03■■□□□ 1.12
CLN6-205ENST00000564846 PLCG1P19174 1290 aa22.03■■□□□ 1.12
CLN6-205ENST00000564846 BMP6P22004 513 aa22.03■■□□□ 1.12
CLN6-205ENST00000564846 COG2Q14746 738 aa22.03■■□□□ 1.12
CLN6-205ENST00000564846 PRR16Q569H4 304 aa22.03■■□□□ 1.12
CLN6-205ENST00000564846 KRT79Q5XKE5 535 aa22.03■■□□□ 1.12
CLN6-205ENST00000564846 CLEC4DQ8WXI8 215 aa22.03■■□□□ 1.12
CLN6-205ENST00000564846 KBTBD4Q9NVX7 518 aa22.03■■□□□ 1.12
CLN6-205ENST00000564846 RABGAP1Q9Y3P9 1069 aa22.03■■□□□ 1.12
CLN6-205ENST00000564846 SCN4AP35499 1836 aa22.03■■□□□ 1.12
CLN6-205ENST00000564846 FAM86B1E9PN63 330 aa22.02■■□□□ 1.12
CLN6-205ENST00000564846 AP5Z1O43299 807 aa22.02■■□□□ 1.12
CLN6-205ENST00000564846 FAM86B2P0C5J1 330 aa22.02■■□□□ 1.12
CLN6-205ENST00000564846 DSG3P32926 999 aa22.02■■□□□ 1.12
CLN6-205ENST00000564846 ZNF76P36508 570 aa22.02■■□□□ 1.12
CLN6-205ENST00000564846 OAZ1P54368 228 aa22.02■■□□□ 1.12
CLN6-205ENST00000564846 TPM4P67936 248 aa22.02■■□□□ 1.12
CLN6-205ENST00000564846 FAM20AQ96MK3 541 aa22.02■■□□□ 1.12
CLN6-205ENST00000564846 POTEMA6NI47 508 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 SLC26A4O43511 780 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 ALAS1P13196 640 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 CT47A1Q5JQC4 288 aaPredicted RBP22.02■■□□□ 1.11
CLN6-205ENST00000564846 CATSPERGQ6ZRH7 1159 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 ANKRD13AQ8IZ07 590 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 ETNPPLQ8TBG4 499 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 STAMQ92783 540 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 LENG9Q96B70 501 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 ATG4CQ96DT6 458 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 RMND1Q9NWS8 449 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 ADAMTS5Q9UNA0 930 aa22.02■■□□□ 1.11
CLN6-205ENST00000564846 MYPNQ86TC9 1320 aa22.01■■□□□ 1.11
CLN6-205ENST00000564846 PAPPA2Q9BXP8 1791 aa22.01■■□□□ 1.11
CLN6-205ENST00000564846 EAPPQ56P03 285 aaPredicted RBP22.01■■□□□ 1.11
CLN6-205ENST00000564846 SARM1Q6SZW1 724 aa22.01■■□□□ 1.11
CLN6-205ENST00000564846 STK17AQ9UEE5 414 aa22.01■■□□□ 1.11
CLN6-205ENST00000564846 SRCAPQ6ZRS2 3230 aa22.01■■□□□ 1.11
CLN6-205ENST00000564846 SMCHD1A6NHR9 2005 aa22.01■■□□□ 1.11
CLN6-205ENST00000564846 NFIBO00712 420 aa22■■□□□ 1.11
CLN6-205ENST00000564846 CASP1P29466 404 aa22■■□□□ 1.11
CLN6-205ENST00000564846 PPATQ06203 517 aa22■■□□□ 1.11
CLN6-205ENST00000564846 SEMA3FQ13275 785 aa22■■□□□ 1.11
CLN6-205ENST00000564846 CUL4BQ13620 913 aa22■■□□□ 1.11
CLN6-205ENST00000564846 SNX29Q8TEQ0 813 aa22■■□□□ 1.11
CLN6-205ENST00000564846 CDK5RAP3Q96JB5 506 aa22■■□□□ 1.11
CLN6-205ENST00000564846 PLIN2Q99541 437 aa22■■□□□ 1.11
CLN6-205ENST00000564846 BLZF1Q9H2G9 400 aa22■■□□□ 1.11
CLN6-205ENST00000564846 HOXC10Q9NYD6 342 aa22■■□□□ 1.11
CLN6-205ENST00000564846 POTECB2RU33 542 aa21.99■■□□□ 1.11
CLN6-205ENST00000564846 MYL5Q02045 173 aa21.99■■□□□ 1.11
CLN6-205ENST00000564846 GRB10Q13322 594 aa21.99■■□□□ 1.11
CLN6-205ENST00000564846 HS1BP3Q53T59 392 aa21.99■■□□□ 1.11
CLN6-205ENST00000564846 REPS2Q8NFH8 660 aa21.99■■□□□ 1.11
CLN6-205ENST00000564846 STK24Q9Y6E0 443 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms