RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 BAZ2AQ9UIF9 1905 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 KIF1AQ12756 1690 aa22.69■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PALMO75781 387 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 ODF2Q5BJF6 829 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 KLHDC7AQ5VTJ3 777 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 GBP6Q6ZN66 633 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 DYNLL2Q96FJ2 89 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 NDST4Q9H3R1 872 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CHADLQ6NUI6 762 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CASKIN2Q8WXE0 1202 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 RIOK1Q9BRS2 568 aaKnown RBP22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 TRIM9Q9C026 710 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PHRF1Q9P1Y6 1649 aaKnown RBP22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 TULP1O00294 542 aaPredicted RBP22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 SPRED3Q2MJR0 410 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 EMBQ6PCB8 327 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 KIAA0895Q8NCT3 520 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 STX8Q9UNK0 236 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PLAGL2Q9UPG8 496 aa22.68■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CHD4Q14839 1912 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 NID2Q14112 1375 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 USP17L3A6NCW0 530 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 USP17L4A6NCW7 530 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 TCP1P17987 556 aaKnown RBP22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 B4GALNT4Q76KP1 1039 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 USP17L1Q7RTZ2 530 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 ZNF384Q8TF68 577 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PACSIN1Q9BY11 444 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 TSGA10Q9BZW7 698 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PLAAQ9Y263 795 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 TXKP42681 527 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 E2F5Q15329 346 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 IFT20Q8IY31 132 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 KBTBD4Q9NVX7 518 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 TFCP2L1Q9NZI6 479 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 GLI3P10071 1580 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 LRP6O75581 1613 aa22.67■■□□□ 1.22
MAP1LC3B-206ENST00000564844 GJA10Q969M2 543 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 SCLT1Q96NL6 688 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 TCP11L1Q9NUJ3 509 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 NUP188Q5SRE5 1749 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 USP17L8P0C7I0 530 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 FNTAP49354 379 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 NLRP14Q86W24 1093 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 AP1M1Q9BXS5 423 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 BCL9LQ86UU0 1499 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CFAP221Q4G0U5 840 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 ALS2CLQ60I27 953 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PRPF38AQ8NAV1 312 aaKnown RBP22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PCDHA6Q9UN73 950 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PCDHA8Q9Y5H6 950 aa22.66■■□□□ 1.22
MAP1LC3B-206ENST00000564844 KCPQ6ZWJ8 1503 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PPP1R37O75864 691 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 KLRK1P26718 216 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 TFAP4Q01664 338 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 VWA3BQ502W6 1294 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CNPY4Q8N129 248 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 NOC3LQ8WTT2 800 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 DHTKD1Q96HY7 919 aaPredicted RBP22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 NOX5Q96PH1 765 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PCDHA4Q9UN74 947 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PDHBP11177 359 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 RDXP35241 583 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PPP2R5BQ15173 497 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 SWT1Q5T5J6 900 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 MYCBPAPQ8TBZ2 947 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PIK3R5Q8WYR1 880 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CCDC114Q96M63 670 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 EPN3Q9H201 632 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 MCM9Q9NXL9 1143 aa22.65■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CALM1P0DP23 149 aa22.64■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CALM2P0DP24 149 aa22.64■■□□□ 1.22
MAP1LC3B-206ENST00000564844 CALM3P0DP25 149 aa22.64■■□□□ 1.22
MAP1LC3B-206ENST00000564844 KLRC1P26715 233 aa22.64■■□□□ 1.22
MAP1LC3B-206ENST00000564844 PTGISQ16647 500 aa22.64■■□□□ 1.22
MAP1LC3B-206ENST00000564844 ARL6IP4Q66PJ3 421 aaKnown RBP22.64■■□□□ 1.22
MAP1LC3B-206ENST00000564844 IQCKQ8N0W5 287 aa22.64■■□□□ 1.22
MAP1LC3B-206ENST00000564844 SLC44A5Q8NCS7 719 aa22.64■■□□□ 1.22
MAP1LC3B-206ENST00000564844 NIP7Q9Y221 180 aaKnown RBP eCLIP22.64■■□□□ 1.22
MAP1LC3B-206ENST00000564844 RAD51CO43502 376 aa22.64■■□□□ 1.21
MAP1LC3B-206ENST00000564844 ATP6V1AP38606 617 aa22.64■■□□□ 1.21
MAP1LC3B-206ENST00000564844 USP8P40818 1118 aa22.64■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CCDC47Q96A33 483 aaKnown RBP22.64■■□□□ 1.21
MAP1LC3B-206ENST00000564844 PYM1Q9BRP8 204 aaKnown RBP22.64■■□□□ 1.21
MAP1LC3B-206ENST00000564844 ADAMTS1Q9UHI8 967 aa22.64■■□□□ 1.21
MAP1LC3B-206ENST00000564844 TRAPPC10P48553 1259 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 KCNB1Q14721 858 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CCDC13Q8IYE1 715 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 TBC1D5Q92609 795 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 TRIM31Q9BZY9 425 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 BICDL2A1A5D9 508 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CYP19A1P11511 503 aaPredicted RBP22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 SKOR1P84550 965 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CACNB1Q02641 598 aaPredicted RBP22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 SLC51AQ86UW1 340 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 PNMA1Q8ND90 353 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 BTG4Q9NY30 223 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 POLR2FP61218 127 aaKnown RBP22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 QPCTQ16769 361 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms