RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PPP1R12CQ9BZL4 782 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 ALDH8A1Q9H2A2 487 aaPredicted RBP17.47■□□□□ 0.39
SPG7-210ENST00000564409 IL23AQ9NPF7 189 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 COL6A3P12111 3177 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 PALM3A6NDB9 673 aaPredicted RBP17.46■□□□□ 0.39
SPG7-210ENST00000564409 PTPN11Q06124 597 aaPredicted RBP17.46■□□□□ 0.39
SPG7-210ENST00000564409 TMEM63BQ5T3F8 832 aa17.46■□□□□ 0.39
SPG7-210ENST00000564409 NFRKBQ6P4R8 1299 aa17.46■□□□□ 0.39
SPG7-210ENST00000564409 C16orf59Q7L2K0 433 aa17.46■□□□□ 0.39
SPG7-210ENST00000564409 RPUSD2Q8IZ73 545 aaKnown RBP17.46■□□□□ 0.39
SPG7-210ENST00000564409 MTMR8Q96EF0 704 aa17.46■□□□□ 0.39
SPG7-210ENST00000564409 RMDN3Q96TC7 470 aa17.46■□□□□ 0.39
SPG7-210ENST00000564409 CDX2Q99626 313 aaPredicted RBP17.46■□□□□ 0.39
SPG7-210ENST00000564409 NOC4LQ9BVI4 516 aaKnown RBP17.46■□□□□ 0.39
SPG7-210ENST00000564409 LAMA2P24043 3122 aaKnown RBP17.46■□□□□ 0.39
SPG7-210ENST00000564409 IFIT3O14879 490 aaKnown RBP17.45■□□□□ 0.38
SPG7-210ENST00000564409 ZBTB5O15062 677 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 B4GALT4O60513 344 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 MYL3P08590 195 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 CYP2C18P33260 490 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 PSMC6P62333 389 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 PTH1RQ03431 593 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 CCDC62Q6P9F0 684 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 CYB5R4Q7L1T6 521 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 STAG2Q8N3U4 1231 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 HERVK_113Q902F9 699 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 FAM161BQ96MY7 647 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 TRPV6Q9H1D0 765 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 VAT1LQ9HCJ6 419 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 MAD2L2Q9UI95 211 aa17.45■□□□□ 0.38
SPG7-210ENST00000564409 EIF3JO75822 258 aaKnown RBP17.44■□□□□ 0.38
SPG7-210ENST00000564409 GH1P01241 217 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 FGBP02675 491 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 PFKMP08237 780 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 PTGS1P23219 599 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 DNAJB2P25686 324 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 HSD17B4P51659 736 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 GRM4Q14833 912 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 ZNF365Q70YC5 407 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 TBC1D5Q92609 795 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 MAP4K1Q92918 833 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 TAAR1Q96RJ0 339 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 MTA3Q9BTC8 594 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 TTYH1Q9H313 450 aaPredicted RBP17.44■□□□□ 0.38
SPG7-210ENST00000564409 PCDHA1Q9Y5I3 950 aa17.44■□□□□ 0.38
SPG7-210ENST00000564409 BAZ2BQ9UIF8 2168 aaKnown RBP17.44■□□□□ 0.38
SPG7-210ENST00000564409 MYO9BQ13459 2157 aa17.43■□□□□ 0.38
SPG7-210ENST00000564409 MYH7BA7E2Y1 1941 aa17.43■□□□□ 0.38
SPG7-210ENST00000564409 E7EWF7 191 aa17.43■□□□□ 0.38
SPG7-210ENST00000564409 WTAPQ15007 396 aa17.43■□□□□ 0.38
SPG7-210ENST00000564409 ARHGEF16Q5VV41 709 aa17.43■□□□□ 0.38
SPG7-210ENST00000564409 KCNV1Q6PIU1 500 aa17.43■□□□□ 0.38
SPG7-210ENST00000564409 MAP3K14Q99558 947 aa17.43■□□□□ 0.38
SPG7-210ENST00000564409 RIOX1Q9H6W3 641 aa17.43■□□□□ 0.38
SPG7-210ENST00000564409 CFBP00751 764 aa17.42■□□□□ 0.38
SPG7-210ENST00000564409 NR3C2P08235 984 aa17.42■□□□□ 0.38
SPG7-210ENST00000564409 RAB30Q15771 203 aa17.42■□□□□ 0.38
SPG7-210ENST00000564409 NBPF20Q3BBV1 942 aa17.42■□□□□ 0.38
SPG7-210ENST00000564409 STOX1Q6ZVD7 989 aa17.42■□□□□ 0.38
SPG7-210ENST00000564409 CATIPQ7Z7H3 387 aa17.42■□□□□ 0.38
SPG7-210ENST00000564409 EMID1Q96A84 441 aaPredicted RBP17.42■□□□□ 0.38
SPG7-210ENST00000564409 PXMP2Q9NR77 195 aa17.42■□□□□ 0.38
SPG7-210ENST00000564409 COL20A1Q9P218 1284 aa17.42■□□□□ 0.38
SPG7-210ENST00000564409 PNMA6FA0A0J9YX94 578 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 PITPNM1O00562 1244 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 ACRP10323 421 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 CASTP20810 708 aaKnown RBP17.41■□□□□ 0.38
SPG7-210ENST00000564409 RFC2P35250 354 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 IRX6P78412 446 aaPredicted RBP17.41■□□□□ 0.38
SPG7-210ENST00000564409 ARHGAP1Q07960 439 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 TROAPQ12815 778 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 SEPT14Q6ZU15 432 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 TMTC2Q8N394 836 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 COPS5Q92905 334 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 TIFAQ96CG3 184 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 ZNF576Q9H609 170 aa17.41■□□□□ 0.38
SPG7-210ENST00000564409 DLL1O00548 723 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 OPLAHO14841 1288 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 ARIH2O95376 493 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 TGFB3P10600 412 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 SMARCA1P28370 1054 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 CCL23P55773 120 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 LAMC2Q13753 1193 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 DGKDQ16760 1214 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 FAM47CQ5HY64 1035 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 TMEM67Q5HYA8 995 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 SESTD1Q86VW0 696 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 WNT8AQ9H1J5 351 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 TRMT13Q9NUP7 481 aaKnown RBP17.4■□□□□ 0.38
SPG7-210ENST00000564409 MSRAQ9UJ68 235 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
SPG7-210ENST00000564409 RBM8AQ9Y5S9 174 aaKnown RBP17.4■□□□□ 0.38
SPG7-210ENST00000564409 UMODL1Q5DID0 1318 aa17.4■□□□□ 0.38
SPG7-210ENST00000564409 TRIP12Q14669 1992 aaPredicted RBP17.39■□□□□ 0.37
SPG7-210ENST00000564409 PPP1R11O60927 126 aaPredicted RBP17.39■□□□□ 0.37
SPG7-210ENST00000564409 MMP3P08254 477 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 FOSL2P15408 326 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 EIF2AK2P19525 551 aaKnown RBP17.39■□□□□ 0.37
SPG7-210ENST00000564409 KIF5BP33176 963 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 BFSP2Q13515 415 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms