RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 TYW1BQ6NUM6 668 aa19.41■□□□□ 0.7
CMTM3-208ENST00000564247 MCF2L2Q86YR7 1114 aa19.41■□□□□ 0.7
CMTM3-208ENST00000564247 TEX2Q8IWB9 1127 aa19.41■□□□□ 0.7
CMTM3-208ENST00000564247 DIS3L2Q8IYB7 885 aaKnown RBP19.41■□□□□ 0.7
CMTM3-208ENST00000564247 BLIDQ8IZY5 108 aa19.41■□□□□ 0.7
CMTM3-208ENST00000564247 CRISPLD2Q9H0B8 497 aa19.41■□□□□ 0.7
CMTM3-208ENST00000564247 FOXP1Q9H334 677 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-208ENST00000564247 RIC8AQ9NPQ8 531 aa19.41■□□□□ 0.7
CMTM3-208ENST00000564247 ATP6V1DQ9Y5K8 247 aa19.41■□□□□ 0.7
CMTM3-208ENST00000564247 PKP1Q13835 747 aa19.4■□□□□ 0.7
CMTM3-208ENST00000564247 MCTP2Q6DN12 878 aa19.4■□□□□ 0.7
CMTM3-208ENST00000564247 UBE2Q1Q7Z7E8 422 aa19.4■□□□□ 0.7
CMTM3-208ENST00000564247 DPP9Q86TI2 863 aa19.4■□□□□ 0.7
CMTM3-208ENST00000564247 DAGLBQ8NCG7 672 aa19.4■□□□□ 0.7
CMTM3-208ENST00000564247 NPLOC4Q8TAT6 608 aa19.4■□□□□ 0.7
CMTM3-208ENST00000564247 TRERF1Q96PN7 1200 aa19.4■□□□□ 0.7
CMTM3-208ENST00000564247 FLRT1Q9NZU1 646 aa19.4■□□□□ 0.7
CMTM3-208ENST00000564247 BTBD18B2RXH4 712 aa19.39■□□□□ 0.69
CMTM3-208ENST00000564247 F13A1P00488 732 aa19.39■□□□□ 0.69
CMTM3-208ENST00000564247 FCER1AP12319 257 aa19.39■□□□□ 0.69
CMTM3-208ENST00000564247 CACNB2Q08289 660 aaPredicted RBP19.39■□□□□ 0.69
CMTM3-208ENST00000564247 MFSD14CQ5VZR4 134 aa19.39■□□□□ 0.69
CMTM3-208ENST00000564247 FERMT3Q86UX7 667 aa19.39■□□□□ 0.69
CMTM3-208ENST00000564247 SLC5A4Q9NY91 659 aa19.39■□□□□ 0.69
CMTM3-208ENST00000564247 ZDHHC9Q9Y397 364 aa19.39■□□□□ 0.69
CMTM3-208ENST00000564247 SMCHD1A6NHR9 2005 aa19.38■□□□□ 0.69
CMTM3-208ENST00000564247 IGHA2P01877 340 aa19.38■□□□□ 0.69
CMTM3-208ENST00000564247 TFRCP02786 760 aaKnown RBP19.38■□□□□ 0.69
CMTM3-208ENST00000564247 OLFML2BQ68BL8 750 aa19.38■□□□□ 0.69
CMTM3-208ENST00000564247 BRAPQ7Z569 592 aa19.38■□□□□ 0.69
CMTM3-208ENST00000564247 REXO1Q8N1G1 1221 aaKnown RBP19.38■□□□□ 0.69
CMTM3-208ENST00000564247 SAMD3Q8N6K7 520 aa19.38■□□□□ 0.69
CMTM3-208ENST00000564247 CHST13Q8NET6 341 aa19.38■□□□□ 0.69
CMTM3-208ENST00000564247 MAF1Q9H063 256 aa19.38■□□□□ 0.69
CMTM3-208ENST00000564247 HOMER2Q9NSB8 354 aa19.38■□□□□ 0.69
CMTM3-208ENST00000564247 RNF146Q9NTX7 359 aa19.38■□□□□ 0.69
CMTM3-208ENST00000564247 MAP3K20Q9NYL2 800 aaKnown RBP19.38■□□□□ 0.69
CMTM3-208ENST00000564247 FBXO40Q9UH90 709 aa19.38■□□□□ 0.69
CMTM3-208ENST00000564247 PLXNA1Q9UIW2 1896 aa19.37■□□□□ 0.69
CMTM3-208ENST00000564247 GCOM1H8Y6P7 765 aaPredicted RBP19.37■□□□□ 0.69
CMTM3-208ENST00000564247 COBLO75128 1261 aa19.37■□□□□ 0.69
CMTM3-208ENST00000564247 CFBP00751 764 aa19.37■□□□□ 0.69
CMTM3-208ENST00000564247 POLR2MP0CAP2 368 aa19.37■□□□□ 0.69
CMTM3-208ENST00000564247 U2AF2P26368 475 aaKnown RBP eCLIP19.37■□□□□ 0.69
CMTM3-208ENST00000564247 MMP19Q99542 508 aa19.37■□□□□ 0.69
CMTM3-208ENST00000564247 CCDC194A0A1B0GVG4 234 aa19.36■□□□□ 0.69
CMTM3-208ENST00000564247 FARP2O94887 1054 aaPredicted RBP19.36■□□□□ 0.69
CMTM3-208ENST00000564247 FOSP01100 380 aaPredicted RBP19.36■□□□□ 0.69
CMTM3-208ENST00000564247 RESTQ13127 1097 aa19.36■□□□□ 0.69
CMTM3-208ENST00000564247 KCTD2Q14681 263 aa19.36■□□□□ 0.69
CMTM3-208ENST00000564247 NOSTRINQ8IVI9 506 aa19.36■□□□□ 0.69
CMTM3-208ENST00000564247 ANKLE1Q8NAG6 615 aa19.36■□□□□ 0.69
CMTM3-208ENST00000564247 OXER1Q8TDS5 423 aa19.36■□□□□ 0.69
CMTM3-208ENST00000564247 ACAD9Q9H845 621 aa19.36■□□□□ 0.69
CMTM3-208ENST00000564247 PCDHA6Q9UN73 950 aa19.36■□□□□ 0.69
CMTM3-208ENST00000564247 RIPK3Q9Y572 518 aa19.36■□□□□ 0.69
CMTM3-208ENST00000564247 PCDHA8Q9Y5H6 950 aa19.36■□□□□ 0.69
CMTM3-208ENST00000564247 PIK3CDO00329 1044 aa19.35■□□□□ 0.69
CMTM3-208ENST00000564247 TAL1P17542 331 aaPredicted RBP19.35■□□□□ 0.69
CMTM3-208ENST00000564247 CCND3P30281 292 aaPredicted RBP19.35■□□□□ 0.69
CMTM3-208ENST00000564247 NR5A1Q13285 461 aa19.35■□□□□ 0.69
CMTM3-208ENST00000564247 NPY5RQ15761 445 aa19.35■□□□□ 0.69
CMTM3-208ENST00000564247 PRPF38BQ5VTL8 546 aaKnown RBP19.35■□□□□ 0.69
CMTM3-208ENST00000564247 JAKMIP3Q5VZ66 844 aa19.35■□□□□ 0.69
CMTM3-208ENST00000564247 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.35■□□□□ 0.69
CMTM3-208ENST00000564247 KRT25Q7Z3Z0 450 aa19.35■□□□□ 0.69
CMTM3-208ENST00000564247 CLEC4DQ8WXI8 215 aa19.35■□□□□ 0.69
CMTM3-208ENST00000564247 OGDHLQ9ULD0 1010 aa19.35■□□□□ 0.69
CMTM3-208ENST00000564247 SPDYE3A6NKU9 549 aa19.34■□□□□ 0.69
CMTM3-208ENST00000564247 KIF28PB7ZC32 967 aa19.34■□□□□ 0.69
CMTM3-208ENST00000564247 CYP2C19P33261 490 aa19.34■□□□□ 0.69
CMTM3-208ENST00000564247 AP3B2Q13367 1082 aa19.34■□□□□ 0.69
CMTM3-208ENST00000564247 MUM1L1Q5H9M0 696 aa19.34■□□□□ 0.69
CMTM3-208ENST00000564247 USP17L6PQ6QN14 398 aa19.34■□□□□ 0.69
CMTM3-208ENST00000564247 RNF207Q6ZRF8 634 aa19.34■□□□□ 0.69
CMTM3-208ENST00000564247 MAML3Q96JK9 1138 aa19.34■□□□□ 0.69
CMTM3-208ENST00000564247 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
CMTM3-208ENST00000564247 EHMT1Q9H9B1 1298 aa19.34■□□□□ 0.69
CMTM3-208ENST00000564247 NOL7Q9UMY1 257 aaKnown RBP19.34■□□□□ 0.69
CMTM3-208ENST00000564247 DIS3Q9Y2L1 958 aaKnown RBP19.34■□□□□ 0.69
CMTM3-208ENST00000564247 FRMPD3Q5JV73 1810 aa19.34■□□□□ 0.69
CMTM3-208ENST00000564247 M0R2N6 131 aa19.33■□□□□ 0.68
CMTM3-208ENST00000564247 NFIBO00712 420 aa19.33■□□□□ 0.68
CMTM3-208ENST00000564247 MEIS2O14770 477 aa19.33■□□□□ 0.68
CMTM3-208ENST00000564247 OPLAHO14841 1288 aa19.33■□□□□ 0.68
CMTM3-208ENST00000564247 UBE2SQ16763 222 aa19.33■□□□□ 0.68
CMTM3-208ENST00000564247 ZNF792Q3KQV3 632 aa19.33■□□□□ 0.68
CMTM3-208ENST00000564247 NSMFQ6X4W1 530 aa19.33■□□□□ 0.68
CMTM3-208ENST00000564247 PIK3AP1Q6ZUJ8 805 aa19.33■□□□□ 0.68
CMTM3-208ENST00000564247 RASGRP4Q8TDF6 673 aa19.33■□□□□ 0.68
CMTM3-208ENST00000564247 TBC1D5Q92609 795 aa19.33■□□□□ 0.68
CMTM3-208ENST00000564247 TNPO1Q92973 898 aaKnown RBP19.33■□□□□ 0.68
CMTM3-208ENST00000564247 PGK2P07205 417 aa19.32■□□□□ 0.68
CMTM3-208ENST00000564247 CYBAP13498 195 aa19.32■□□□□ 0.68
CMTM3-208ENST00000564247 HOXA13P31271 388 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-208ENST00000564247 CLK2P49760 499 aaKnown RBP19.32■□□□□ 0.68
CMTM3-208ENST00000564247 HSD17B4P51659 736 aa19.32■□□□□ 0.68
CMTM3-208ENST00000564247 NONOQ15233 471 aaKnown RBP eCLIP19.32■□□□□ 0.68
CMTM3-208ENST00000564247 RILPL1Q5EBL4 403 aa19.32■□□□□ 0.68
CMTM3-208ENST00000564247 LHX8Q68G74 356 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms