RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 EPC1Q9H2F5 836 aa13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 DOCK8Q8NF50 2099 aa13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 DOPEY2Q9Y3R5 2298 aa13.28□□□□□ -0.28
HDGFL3-204ENST00000563790 ASGR2P07307 311 aa13.27□□□□□ -0.29
HDGFL3-204ENST00000563790 LINC00271P0C7V0 271 aa13.27□□□□□ -0.29
HDGFL3-204ENST00000563790 SELPP16109 830 aa13.27□□□□□ -0.29
HDGFL3-204ENST00000563790 PPP2R1AP30153 589 aa13.27□□□□□ -0.29
HDGFL3-204ENST00000563790 BMPR1AP36894 532 aa13.27□□□□□ -0.29
HDGFL3-204ENST00000563790 PUM3Q15397 648 aaKnown RBP13.27□□□□□ -0.29
HDGFL3-204ENST00000563790 NOL8Q76FK4 1167 aaKnown RBP13.27□□□□□ -0.29
HDGFL3-204ENST00000563790 CCDC155Q8N6L0 562 aa13.27□□□□□ -0.29
HDGFL3-204ENST00000563790 LINS1Q8NG48 757 aa13.27□□□□□ -0.29
HDGFL3-204ENST00000563790 COL6A6A6NMZ7 2263 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 C2CD4DB7Z1M9 353 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 TMPOP42166 694 aaKnown RBP13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 MCAMP43121 646 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 NRIP1P48552 1158 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 C19orf57Q0VDD7 668 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 ZNF528Q3MIS6 628 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 NFRKBQ6P4R8 1299 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 LRRC8DQ7L1W4 858 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 TSHZ2Q9NRE2 1034 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 RWDD3Q9Y3V2 267 aa13.26□□□□□ -0.29
HDGFL3-204ENST00000563790 DYNC1LI2O43237 492 aaPredicted RBP13.25□□□□□ -0.29
HDGFL3-204ENST00000563790 HOXD8P13378 290 aaPredicted RBP13.25□□□□□ -0.29
HDGFL3-204ENST00000563790 COPB2P35606 906 aa13.25□□□□□ -0.29
HDGFL3-204ENST00000563790 LRRC24Q50LG9 513 aa13.25□□□□□ -0.29
HDGFL3-204ENST00000563790 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
HDGFL3-204ENST00000563790 ARMCX2Q7L311 632 aa13.25□□□□□ -0.29
HDGFL3-204ENST00000563790 SIX5Q8N196 739 aa13.25□□□□□ -0.29
HDGFL3-204ENST00000563790 ATP8B4Q8TF62 1192 aa13.25□□□□□ -0.29
HDGFL3-204ENST00000563790 S1PR5Q9H228 398 aa13.25□□□□□ -0.29
HDGFL3-204ENST00000563790 PCDHGA2Q9Y5H1 932 aa13.25□□□□□ -0.29
HDGFL3-204ENST00000563790 ARHGAP6O43182 974 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 CSPG5O95196 566 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 PLA2G2AP14555 144 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 PURAQ00577 322 aaKnown RBP13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 RBL2Q08999 1139 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 FAM47CQ5HY64 1035 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 MAML2Q8IZL2 1156 aaPredicted RBP13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 MAP4K1Q92918 833 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 FGD4Q96M96 766 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 RXFP3Q9NSD7 469 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 DLGAP2Q9P1A6 1054 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 GMEB2Q9UKD1 530 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 DENND2AQ9ULE3 1009 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 WASF3Q9UPY6 502 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 Q9Y3F1 56 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 GPSM3Q9Y4H4 160 aa13.24□□□□□ -0.29
HDGFL3-204ENST00000563790 TTC3P53804 2025 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 ELL2O00472 640 aaPredicted RBP13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 SEMA3EO15041 775 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 LRP3O75074 770 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 LGR5O75473 907 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 FLOT1O75955 427 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 PTGS1P23219 599 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 STAT3P40763 770 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 PTPN11Q06124 597 aaPredicted RBP13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 SPEM2Q0P670 501 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 RAB3GAP1Q15042 981 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 ZNF384Q8TF68 577 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 TOP1MTQ969P6 601 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 DDX11Q96FC9 970 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 NEK1Q96PY6 1258 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 CHMP4AQ9BY43 222 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 POLR3EQ9NVU0 708 aa13.23□□□□□ -0.29
HDGFL3-204ENST00000563790 TM4SF5O14894 197 aa13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 IL31Q6EBC2 164 aa13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 TEX11Q8IYF3 940 aa13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 ZDHHC14Q8IZN3 488 aa13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 FIBCD1Q8N539 461 aa13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 CLP1Q92989 425 aaKnown RBP13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 GNL3LQ9NVN8 582 aaKnown RBP13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 FBXL21Q9UKT6 434 aa13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 PLAGL2Q9UPG8 496 aa13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 NOD1Q9Y239 953 aa13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 PTPRQQ9UMZ3 2332 aa13.22□□□□□ -0.29
HDGFL3-204ENST00000563790 TBC1D4O60343 1298 aa13.21□□□□□ -0.29
HDGFL3-204ENST00000563790 MECOMQ03112 1051 aa13.21□□□□□ -0.29
HDGFL3-204ENST00000563790 TATDN1Q6P1N9 297 aa13.21□□□□□ -0.29
HDGFL3-204ENST00000563790 RBM23Q86U06 439 aaKnown RBP13.21□□□□□ -0.29
HDGFL3-204ENST00000563790 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.29
HDGFL3-204ENST00000563790 ZBTB44Q8NCP5 570 aa13.21□□□□□ -0.29
HDGFL3-204ENST00000563790 VN1R2Q8NFZ6 395 aa13.21□□□□□ -0.29
HDGFL3-204ENST00000563790 ATRIPQ8WXE1 791 aa13.21□□□□□ -0.29
HDGFL3-204ENST00000563790 ZNF214Q9UL59 606 aaPredicted RBP13.21□□□□□ -0.29
HDGFL3-204ENST00000563790 FLNCQ14315 2725 aa13.2□□□□□ -0.3
HDGFL3-204ENST00000563790 FSD2A1L4K1 749 aa13.2□□□□□ -0.3
HDGFL3-204ENST00000563790 GDF9O60383 454 aa13.2□□□□□ -0.3
HDGFL3-204ENST00000563790 LILRB5O75023 590 aa13.2□□□□□ -0.3
HDGFL3-204ENST00000563790 DNAJB1P25685 340 aa13.2□□□□□ -0.3
HDGFL3-204ENST00000563790 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
HDGFL3-204ENST00000563790 SRSF1Q07955 248 aaKnown RBP eCLIP13.2□□□□□ -0.3
HDGFL3-204ENST00000563790 SPTY2D1Q68D10 685 aaPredicted RBP13.2□□□□□ -0.3
HDGFL3-204ENST00000563790 LPIN2Q92539 896 aa13.2□□□□□ -0.3
HDGFL3-204ENST00000563790 CTAGE1Q96RT6 745 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms