RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ARHGAP4P98171 946 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 ORC2Q13416 577 aaPredicted RBP11.55□□□□□ -0.56
SMG1-208ENST00000563448 PPP4R3AQ6IN85 833 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 NSMFQ6X4W1 530 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 CCAR1Q8IX12 1150 aaKnown RBP11.55□□□□□ -0.56
SMG1-208ENST00000563448 KRI1Q8N9T8 703 aaKnown RBP11.55□□□□□ -0.56
SMG1-208ENST00000563448 CHST13Q8NET6 341 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 SYTL5Q8TDW5 730 aaPredicted RBP11.55□□□□□ -0.56
SMG1-208ENST00000563448 MOV10L1Q9BXT6 1211 aaKnown RBP11.55□□□□□ -0.56
SMG1-208ENST00000563448 GOLPH3LQ9H4A5 285 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 ACAD9Q9H845 621 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 RPTORQ8N122 1335 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 MANSC4A6NHS7 340 aaPredicted RBP11.55□□□□□ -0.56
SMG1-208ENST00000563448 SLC37A4O43826 429 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 CYP3A4P08684 503 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 BAATQ14032 418 aaPredicted RBP11.55□□□□□ -0.56
SMG1-208ENST00000563448 IL17AQ16552 155 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 POTEDQ86YR6 584 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 HHIPL1Q96JK4 782 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 MBOAT7Q96N66 472 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 TAAR1Q96RJ0 339 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 R3HDMLQ9H3Y0 253 aa11.55□□□□□ -0.56
SMG1-208ENST00000563448 CYP3A7-CYP3A51PA0A087WV96 503 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 IGF2BP3O00425 579 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMG1-208ENST00000563448 NEMFO60524 1076 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 CYP3A7P24462 503 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 ERVK-9P63128 1117 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 ERVK-24P63145 666 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 UBXN2AP68543 259 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 ARL6IP4Q66PJ3 421 aaKnown RBP11.54□□□□□ -0.56
SMG1-208ENST00000563448 SHC4Q6S5L8 630 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 MOXD1Q6UVY6 613 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 FSIP1Q8NA03 581 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 GTF3C2Q8WUA4 911 aaPredicted RBP11.54□□□□□ -0.56
SMG1-208ENST00000563448 CCDC102AQ96A19 550 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 FERMT2Q96AC1 680 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 PURBQ96QR8 312 aaKnown RBP11.54□□□□□ -0.56
SMG1-208ENST00000563448 MAF1Q9H063 256 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 CSRNP2Q9H175 543 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 A1CFQ9NQ94 594 aaKnown RBP11.54□□□□□ -0.56
SMG1-208ENST00000563448 FRMPD4Q14CM0 1322 aa11.54□□□□□ -0.56
SMG1-208ENST00000563448 A0A1B0GVL5 298 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 LAD1O00515 517 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 GCFC2P16383 781 aaKnown RBP11.53□□□□□ -0.56
SMG1-208ENST00000563448 CMA1P23946 247 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 CIITAP33076 1130 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 SPECC1Q5M775 1068 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 RESP18Q5W5W9 173 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 NCAPG2Q86XI2 1143 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 ZNF579Q8NAF0 562 aaKnown RBP11.53□□□□□ -0.56
SMG1-208ENST00000563448 SMCR8Q8TEV9 937 aaPredicted RBP11.53□□□□□ -0.56
SMG1-208ENST00000563448 MRPS27Q92552 414 aaKnown RBP11.53□□□□□ -0.56
SMG1-208ENST00000563448 MTMR9Q96QG7 549 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 NAP1L4Q99733 375 aaKnown RBP11.53□□□□□ -0.56
SMG1-208ENST00000563448 EHMT1Q9H9B1 1298 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 CYP39A1Q9NYL5 469 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 DDX25Q9UHL0 483 aaKnown RBP11.53□□□□□ -0.56
SMG1-208ENST00000563448 VWA3AA6NCI4 1184 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 FAM86B1E9PN63 330 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 SLC25A27O95847 323 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 FAM86B2P0C5J1 330 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 OR52Z1P0C646 297 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 ERCC3P19447 782 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 PRPHP41219 470 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 CAVIN1Q6NZI2 390 aaKnown RBP11.53□□□□□ -0.56
SMG1-208ENST00000563448 ENGASEQ8NFI3 743 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 TMEM63CQ9P1W3 806 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 FBXO40Q9UH90 709 aa11.53□□□□□ -0.56
SMG1-208ENST00000563448 NR1I2O75469 434 aa11.52□□□□□ -0.56
SMG1-208ENST00000563448 GCLCP48506 637 aaPredicted RBP11.52□□□□□ -0.56
SMG1-208ENST00000563448 SNW1Q13573 536 aaKnown RBP11.52□□□□□ -0.56
SMG1-208ENST00000563448 CALCRLQ16602 461 aa11.52□□□□□ -0.56
SMG1-208ENST00000563448 Q4G0T1 1027 aa11.52□□□□□ -0.56
SMG1-208ENST00000563448 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.56
SMG1-208ENST00000563448 ANKRD13CQ8N6S4 541 aa11.52□□□□□ -0.56
SMG1-208ENST00000563448 HAS1Q92839 578 aa11.52□□□□□ -0.56
SMG1-208ENST00000563448 LENG9Q96B70 501 aa11.52□□□□□ -0.56
SMG1-208ENST00000563448 ZIC5Q96T25 663 aa11.52□□□□□ -0.56
SMG1-208ENST00000563448 PARK7Q99497 189 aaKnown RBP11.52□□□□□ -0.56
SMG1-208ENST00000563448 MORF4L1Q9UBU8 362 aa11.52□□□□□ -0.56
SMG1-208ENST00000563448 HPSEQ9Y251 543 aa11.52□□□□□ -0.56
SMG1-208ENST00000563448 ADGRA2Q96PE1 1338 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 IGLV3-22A0A075B6J6 115 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 FAM237AA0A1B0GTK4 181 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 PFKFB1P16118 471 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 COPB2P35606 906 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 NDUFA8P51970 172 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 INHBEP58166 350 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 PGM5Q15124 567 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 DTHD1Q6ZMT9 781 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 USP49Q70CQ1 688 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMG1-208ENST00000563448 IFNL1Q8IU54 200 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 ANKRD35Q8N283 1001 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 GPRC5AQ8NFJ5 357 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 IL31RAQ8NI17 732 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 CYP2W1Q8TAV3 490 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 ZFP91Q96JP5 570 aaPredicted RBP11.52□□□□□ -0.57
SMG1-208ENST00000563448 RMDN3Q96TC7 470 aa11.52□□□□□ -0.57
SMG1-208ENST00000563448 ZCCHC17Q9NP64 241 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms