RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 OGFOD1Q8N543 542 aa6.8□□□□□ -1.32
CLK3-212ENST00000563418 MEIS3Q99687 375 aa6.8□□□□□ -1.32
CLK3-212ENST00000563418 CRNKL1Q9BZJ0 848 aaKnown RBP6.8□□□□□ -1.32
CLK3-212ENST00000563418 CALM1P0DP23 149 aa6.8□□□□□ -1.32
CLK3-212ENST00000563418 CALM2P0DP24 149 aa6.8□□□□□ -1.32
CLK3-212ENST00000563418 CALM3P0DP25 149 aa6.8□□□□□ -1.32
CLK3-212ENST00000563418 RPL13P26373 211 aaKnown RBP6.8□□□□□ -1.32
CLK3-212ENST00000563418 GJC2Q5T442 439 aaPredicted RBP6.8□□□□□ -1.32
CLK3-212ENST00000563418 KCNV2Q8TDN2 545 aa6.8□□□□□ -1.32
CLK3-212ENST00000563418 ZNF274Q96GC6 653 aaPredicted RBP6.8□□□□□ -1.32
CLK3-212ENST00000563418 COQ7Q99807 217 aa6.8□□□□□ -1.32
CLK3-212ENST00000563418 SPC25Q9HBM1 224 aa6.8□□□□□ -1.32
CLK3-212ENST00000563418 APOA1P02647 267 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 KCNA2P16389 499 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 MAGOHP61326 146 aaKnown RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 STX3Q13277 289 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 TSHZ1Q6ZSZ6 1077 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 HORMAD1Q86X24 394 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 RBBP8NLQ8NC74 664 aaPredicted RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 MAGOHBQ96A72 148 aaKnown RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 CD209Q9NNX6 404 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 EHD2Q9NZN4 543 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 ZDHHC9Q9Y397 364 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 PCNX4Q63HM2 1172 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 SMCR8Q8TEV9 937 aaPredicted RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 SDCCAG3Q96C92 435 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 THAP11Q96EK4 314 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 ZWILCHQ9H900 591 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 AP4S1Q9Y587 144 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 ADGRG1Q9Y653 693 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 GOLGA8CPA6NN73 597 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 GOLGA8TH3BQL2 631 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 TBC1D12O60347 775 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 GOLGA8HP0CJ92 632 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 NUP107P57740 925 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 FKBP4Q02790 459 aaKnown RBP eCLIP6.79□□□□□ -1.32
CLK3-212ENST00000563418 TYW1BQ6NUM6 668 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 CCNI2Q6ZMN8 369 aaPredicted RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 UBE3BQ7Z3V4 1068 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 SYT2Q8N9I0 419 aaPredicted RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 TRIM31Q9BZY9 425 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 PSMD14O00487 310 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 KRT7P08729 469 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 SERPINB1P30740 379 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 KRT6CP48668 564 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 PSMD6Q15008 389 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 RTN1Q16799 776 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 GRAMD1BQ3KR37 738 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 RFWD2Q8NHY2 731 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 TAB2Q9NYJ8 693 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 RPL26L1Q9UNX3 145 aaKnown RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 A0A1B0GW55 424 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 E9PMD0 336 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 XPOTO43592 962 aaKnown RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 DAB1O75553 588 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 ZMYND10O75800 440 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 DUX4L2P0CJ85 424 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 DUX4L3P0CJ86 424 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 DUX4L4P0CJ87 422 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 DUX4L5P0CJ88 424 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 DUX4L6P0CJ89 424 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 DUX4L7P0CJ90 424 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 MX2P20592 715 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 SKOR1P84550 965 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 ARHGAP4P98171 946 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 TFAP4Q01664 338 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 RIPK1Q13546 671 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 THOC7Q6I9Y2 204 aaKnown RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 CENPUQ71F23 418 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 RASGRP2Q7LDG7 609 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 TTLL11Q8NHH1 800 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 FAM129AQ9BZQ8 928 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 DUX4Q9UBX2 424 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 SAP30BPQ9UHR5 308 aaKnown RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 PITPNM2Q9BZ72 1349 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 MLECQ14165 292 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 SPARCL1Q14515 664 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 TRIM16LQ309B1 348 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 CEP55Q53EZ4 464 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 SKA1Q96BD8 255 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 DNAJC17Q9NVM6 304 aaKnown RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 ANKIB1Q9P2G1 1089 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 ATP8A1Q9Y2Q0 1164 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 TMED5Q9Y3A6 229 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 PODXLO00592 558 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 ENC1O14682 589 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 COPB1P53618 953 aaKnown RBP6.79□□□□□ -1.32
CLK3-212ENST00000563418 TNIP2Q8NFZ5 429 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 TXNDC16Q9P2K2 825 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 BIRC5O15392 142 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 ASAP2O43150 1006 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 VAMP4O75379 141 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 TSPAN9O75954 239 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 PDHBP11177 359 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 TRPC1P48995 793 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 LONRF3Q496Y0 759 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 GALNT15Q8N3T1 639 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 MAB21L3Q8N8X9 362 aa6.79□□□□□ -1.32
CLK3-212ENST00000563418 CEP126Q9P2H0 1117 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms