RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 KDM4AO75164 1064 aa19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 TXNP10599 105 aaKnown RBP19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 DEFB128Q7Z7B8 93 aa19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 CHD1LQ86WJ1 897 aa19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 PNMA1Q8ND90 353 aa19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 RGS22Q8NE09 1264 aa19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 SYMPKQ92797 1274 aaKnown RBP19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 SLC28A3Q9HAS3 691 aa19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 GPHNQ9NQX3 736 aaPredicted RBP19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 COL20A1Q9P218 1284 aa19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 SCN5AQ14524 2016 aa19.69■□□□□ 0.74
HDGFL3-203ENST00000563404 LAMA4Q16363 1823 aa19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 ZBBXA8MT70 800 aa19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 IGFBP4P22692 258 aa19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 MFAP1P55081 439 aaKnown RBP19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 CCDC85BQ15834 202 aaPredicted RBP19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 CDC37Q16543 378 aaPredicted RBP19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 FAM47CQ5HY64 1035 aa19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 NFRKBQ6P4R8 1299 aa19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 CCDC62Q6P9F0 684 aa19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 CWC27Q6UX04 472 aaKnown RBP19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 ADGRF4Q8IZF3 695 aa19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 ANKS1AQ92625 1134 aa19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 TAAR1Q96RJ0 339 aa19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 PCDHA11Q9Y5I1 949 aa19.68■□□□□ 0.74
HDGFL3-203ENST00000563404 B4E1Z4 1266 aa19.67■□□□□ 0.74
HDGFL3-203ENST00000563404 ATP2A2P16615 1042 aaKnown RBP19.67■□□□□ 0.74
HDGFL3-203ENST00000563404 NUCB1Q02818 461 aa19.67■□□□□ 0.74
HDGFL3-203ENST00000563404 SYTL5Q8TDW5 730 aaPredicted RBP19.67■□□□□ 0.74
HDGFL3-203ENST00000563404 MPHOSPH6Q99547 160 aaKnown RBP19.67■□□□□ 0.74
HDGFL3-203ENST00000563404 RWDD1Q9H446 243 aaPredicted RBP19.67■□□□□ 0.74
HDGFL3-203ENST00000563404 KPNA6O60684 536 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 PFKMP08237 780 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 IQCF3P0C7M6 154 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 LY6KQ17RY6 165 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 QRICH1Q2TAL8 776 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 BRDTQ58F21 947 aaPredicted RBP19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 PPP2R2DQ66LE6 453 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 ENAHQ8N8S7 591 aaPredicted RBP19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 CTAGE1Q96RT6 745 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 ZSCAN10Q96SZ4 725 aaPredicted RBP19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 ZSWIM5Q9P217 1185 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 XIRP2A4UGR9 3374 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 ABCB11O95342 1321 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 RAD50Q92878 1312 aa19.66■□□□□ 0.74
HDGFL3-203ENST00000563404 PTPN11Q06124 597 aaPredicted RBP19.65■□□□□ 0.74
HDGFL3-203ENST00000563404 IQCA1Q86XH1 822 aa19.65■□□□□ 0.74
HDGFL3-203ENST00000563404 AFG1LQ8WV93 481 aa19.65■□□□□ 0.74
HDGFL3-203ENST00000563404 IL25Q9H293 177 aa19.65■□□□□ 0.74
HDGFL3-203ENST00000563404 KAT14Q9H8E8 782 aa19.65■□□□□ 0.74
HDGFL3-203ENST00000563404 TRANK1O15050 2925 aa19.65■□□□□ 0.74
HDGFL3-203ENST00000563404 B4DLN1 442 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 RBAK-RBAKDNI3L0D1 243 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 PITPNM1O00562 1244 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 MMP3P08254 477 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 MRPL12P52815 198 aaKnown RBP19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 ARHGAP1Q07960 439 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 AAMPQ13685 434 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 ASPRV1Q53RT3 343 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 CCDC178Q5BJE1 867 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 SEPT14Q6ZU15 432 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 ATXN2LQ8WWM7 1075 aaKnown RBP19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 KAT2BQ92831 832 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 ASB2Q96Q27 587 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 DSCC1Q9BVC3 393 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 JMJD4Q9H9V9 463 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 DIAPH3Q9NSV4 1193 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 THEGQ9P2T0 379 aa19.64■□□□□ 0.73
HDGFL3-203ENST00000563404 TANC1Q9C0D5 1861 aa19.63■□□□□ 0.73
HDGFL3-203ENST00000563404 ARHGEF15O94989 841 aa19.63■□□□□ 0.73
HDGFL3-203ENST00000563404 CA3P07451 260 aa19.63■□□□□ 0.73
HDGFL3-203ENST00000563404 RFC2P35250 354 aa19.63■□□□□ 0.73
HDGFL3-203ENST00000563404 NT5C2P49902 561 aa19.63■□□□□ 0.73
HDGFL3-203ENST00000563404 CHMP4BP1P59074 171 aa19.63■□□□□ 0.73
HDGFL3-203ENST00000563404 NSUN6Q8TEA1 469 aaKnown RBP19.63■□□□□ 0.73
HDGFL3-203ENST00000563404 MAF1Q9H063 256 aa19.63■□□□□ 0.73
HDGFL3-203ENST00000563404 VAT1LQ9HCJ6 419 aa19.63■□□□□ 0.73
HDGFL3-203ENST00000563404 EPOPA6NHQ4 379 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 RFXAPO00287 272 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 OPLAHO14841 1288 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 GH1P01241 217 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 GPNMBQ14956 572 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 GDF6Q6KF10 455 aaPredicted RBP19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 CHST3Q7LGC8 479 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 STAG2Q8N3U4 1231 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 RETREG2Q8NC44 543 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 TET1Q8NFU7 2136 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 EXOC6Q8TAG9 804 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 RMDN3Q96TC7 470 aa19.62■□□□□ 0.73
HDGFL3-203ENST00000563404 TNFRSF10AO00220 468 aa19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 PARP1P09874 1014 aaKnown RBP19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 EIF2AK2P19525 551 aaKnown RBP19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 STXBP2Q15833 593 aa19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 PTGISQ16647 500 aa19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 IMMTQ16891 758 aaKnown RBP19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 TMEM67Q5HYA8 995 aa19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 SESTD1Q86VW0 696 aa19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 FBXO11Q86XK2 927 aa19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 MCF2L2Q86YR7 1114 aa19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 DHX38Q92620 1227 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms