RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 ADD1P35611 737 aaKnown RBP21.58■■□□□ 1.05
CDH11-206ENST00000562998 METAP2P50579 478 aaKnown RBP eCLIP21.58■■□□□ 1.05
CDH11-206ENST00000562998 MRPL12P52815 198 aaKnown RBP21.58■■□□□ 1.05
CDH11-206ENST00000562998 TMEM63BQ5T3F8 832 aa21.58■■□□□ 1.05
CDH11-206ENST00000562998 RNF180Q86T96 592 aa21.58■■□□□ 1.05
CDH11-206ENST00000562998 MPHOSPH6Q99547 160 aaKnown RBP21.58■■□□□ 1.05
CDH11-206ENST00000562998 TSEN34Q9BSV6 310 aaKnown RBP21.58■■□□□ 1.05
CDH11-206ENST00000562998 ALDH8A1Q9H2A2 487 aaPredicted RBP21.58■■□□□ 1.05
CDH11-206ENST00000562998 Q9Y3F1 56 aa21.58■■□□□ 1.05
CDH11-206ENST00000562998 FRMPD4Q14CM0 1322 aa21.57■■□□□ 1.04
CDH11-206ENST00000562998 MYADML2A6NDP7 307 aa21.57■■□□□ 1.04
CDH11-206ENST00000562998 KBTBD13C9JR72 458 aa21.57■■□□□ 1.04
CDH11-206ENST00000562998 GCOM1H8Y6P7 765 aaPredicted RBP21.57■■□□□ 1.04
CDH11-206ENST00000562998 PIK3CDO00329 1044 aa21.57■■□□□ 1.04
CDH11-206ENST00000562998 MEIS2O14770 477 aa21.57■■□□□ 1.04
CDH11-206ENST00000562998 POLR2MP0CAP2 368 aa21.57■■□□□ 1.04
CDH11-206ENST00000562998 HOXA13P31271 388 aaPredicted RBP21.57■■□□□ 1.04
CDH11-206ENST00000562998 IRX5P78411 483 aaPredicted RBP21.57■■□□□ 1.04
CDH11-206ENST00000562998 PDE4DQ08499 809 aa21.57■■□□□ 1.04
CDH11-206ENST00000562998 NTRK3Q16288 839 aa21.57■■□□□ 1.04
CDH11-206ENST00000562998 PRPF38BQ5VTL8 546 aaKnown RBP21.57■■□□□ 1.04
CDH11-206ENST00000562998 SENP6Q9GZR1 1112 aaPredicted RBP21.57■■□□□ 1.04
CDH11-206ENST00000562998 CCDC196A0A1B0GTZ2 297 aa21.56■■□□□ 1.04
CDH11-206ENST00000562998 SNX17Q15036 470 aa21.56■■□□□ 1.04
CDH11-206ENST00000562998 LRRC26Q2I0M4 334 aa21.56■■□□□ 1.04
CDH11-206ENST00000562998 DUSP28Q4G0W2 176 aa21.56■■□□□ 1.04
CDH11-206ENST00000562998 DPF3Q92784 378 aa21.56■■□□□ 1.04
CDH11-206ENST00000562998 PDCD2LQ9BRP1 358 aa21.56■■□□□ 1.04
CDH11-206ENST00000562998 V9GY48 417 aaPredicted RBP21.56■■□□□ 1.04
CDH11-206ENST00000562998 KIAA1217Q5T5P2 1943 aa21.56■■□□□ 1.04
CDH11-206ENST00000562998 NR3C2P08235 984 aa21.55■■□□□ 1.04
CDH11-206ENST00000562998 PTGS1P23219 599 aa21.55■■□□□ 1.04
CDH11-206ENST00000562998 C1orf53Q5VUE5 145 aa21.55■■□□□ 1.04
CDH11-206ENST00000562998 ARHGEF16Q5VV41 709 aa21.55■■□□□ 1.04
CDH11-206ENST00000562998 WWC2Q6AWC2 1192 aa21.55■■□□□ 1.04
CDH11-206ENST00000562998 TYW1BQ6NUM6 668 aa21.55■■□□□ 1.04
CDH11-206ENST00000562998 CCDC62Q6P9F0 684 aa21.55■■□□□ 1.04
CDH11-206ENST00000562998 ZNF274Q96GC6 653 aaPredicted RBP21.55■■□□□ 1.04
CDH11-206ENST00000562998 WDR11Q9BZH6 1224 aa21.55■■□□□ 1.04
CDH11-206ENST00000562998 EIF2AK2P19525 551 aaKnown RBP21.54■■□□□ 1.04
CDH11-206ENST00000562998 STXBP2Q15833 593 aa21.54■■□□□ 1.04
CDH11-206ENST00000562998 KCNA10Q16322 511 aa21.54■■□□□ 1.04
CDH11-206ENST00000562998 TLK2Q86UE8 772 aa21.54■■□□□ 1.04
CDH11-206ENST00000562998 VSIG10LQ86VR7 867 aa21.54■■□□□ 1.04
CDH11-206ENST00000562998 SCFD2Q8WU76 684 aa21.54■■□□□ 1.04
CDH11-206ENST00000562998 PDRG1Q9NUG6 133 aa21.54■■□□□ 1.04
CDH11-206ENST00000562998 CEP290O15078 2479 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 A0A1W2PQ45 241 aaPredicted RBP21.53■■□□□ 1.04
CDH11-206ENST00000562998 A0A1W2PQY0 241 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 MOXD2PA6NHM9 499 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 hCG_1984214I3L0E3 225 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 EVI5O60447 810 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 EIF3JO75822 258 aaKnown RBP21.53■■□□□ 1.04
CDH11-206ENST00000562998 RGS20O76081 388 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 C6orf222P0C671 652 aaPredicted RBP21.53■■□□□ 1.04
CDH11-206ENST00000562998 ACLYP53396 1101 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 PGM5Q15124 567 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 USP17L6PQ6QN14 398 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 SLC39A5Q6ZMH5 540 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 TEX2Q8IWB9 1127 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 ZNF713Q8N859 430 aaPredicted RBP21.53■■□□□ 1.04
CDH11-206ENST00000562998 IL31RAQ8NI17 732 aa21.53■■□□□ 1.04
CDH11-206ENST00000562998 GPKOWQ92917 476 aaPredicted RBP eCLIP21.53■■□□□ 1.04
CDH11-206ENST00000562998 NAP1L2Q9ULW6 460 aaPredicted RBP21.53■■□□□ 1.04
CDH11-206ENST00000562998 H0YGN5 161 aa21.52■■□□□ 1.04
CDH11-206ENST00000562998 ARIH2O95376 493 aa21.52■■□□□ 1.04
CDH11-206ENST00000562998 IFNAR1P17181 557 aa21.52■■□□□ 1.04
CDH11-206ENST00000562998 PKN1Q16512 942 aa21.52■■□□□ 1.04
CDH11-206ENST00000562998 PFKFB3Q16875 520 aaPredicted RBP21.52■■□□□ 1.04
CDH11-206ENST00000562998 PPP1R18Q6NYC8 613 aa21.52■■□□□ 1.04
CDH11-206ENST00000562998 FCHSD1Q86WN1 690 aa21.52■■□□□ 1.04
CDH11-206ENST00000562998 PSTPIP2Q9H939 334 aa21.52■■□□□ 1.04
CDH11-206ENST00000562998 SPC25Q9HBM1 224 aa21.52■■□□□ 1.04
CDH11-206ENST00000562998 BARHL2Q9NY43 387 aa21.52■■□□□ 1.04
CDH11-206ENST00000562998 STXBP3O00186 592 aa21.51■■□□□ 1.03
CDH11-206ENST00000562998 NKRFO15226 690 aaKnown RBP eCLIP21.51■■□□□ 1.03
CDH11-206ENST00000562998 DYNC1LI2O43237 492 aaPredicted RBP21.51■■□□□ 1.03
CDH11-206ENST00000562998 PRPF3O43395 683 aaKnown RBP21.51■■□□□ 1.03
CDH11-206ENST00000562998 MYCNP04198 464 aaPredicted RBP21.51■■□□□ 1.03
CDH11-206ENST00000562998 GNASQ5JWF2 1037 aa21.51■■□□□ 1.03
CDH11-206ENST00000562998 HEATR3Q7Z4Q2 680 aa21.51■■□□□ 1.03
CDH11-206ENST00000562998 PCSK9Q8NBP7 692 aaKnown RBP21.51■■□□□ 1.03
CDH11-206ENST00000562998 FERMT2Q96AC1 680 aa21.51■■□□□ 1.03
CDH11-206ENST00000562998 NCOA5Q9HCD5 579 aaKnown RBP21.51■■□□□ 1.03
CDH11-206ENST00000562998 NR2E3Q9Y5X4 410 aa21.51■■□□□ 1.03
CDH11-206ENST00000562998 ASGR1P07306 291 aa21.5■■□□□ 1.03
CDH11-206ENST00000562998 MRPS9P82933 396 aaKnown RBP21.5■■□□□ 1.03
CDH11-206ENST00000562998 FSCN1Q16658 493 aaKnown RBP21.5■■□□□ 1.03
CDH11-206ENST00000562998 NOL8Q76FK4 1167 aaKnown RBP21.5■■□□□ 1.03
CDH11-206ENST00000562998 LARP6Q9BRS8 491 aaKnown RBP21.5■■□□□ 1.03
CDH11-206ENST00000562998 RNF26Q9BY78 433 aaPredicted RBP21.5■■□□□ 1.03
CDH11-206ENST00000562998 TXNP10599 105 aaKnown RBP21.49■■□□□ 1.03
CDH11-206ENST00000562998 SCG2P13521 617 aa21.49■■□□□ 1.03
CDH11-206ENST00000562998 ATN1P54259 1190 aaPredicted RBP21.49■■□□□ 1.03
CDH11-206ENST00000562998 CCT2P78371 535 aaKnown RBP21.49■■□□□ 1.03
CDH11-206ENST00000562998 BEX3Q00994 111 aa21.49■■□□□ 1.03
CDH11-206ENST00000562998 TTLL4Q14679 1199 aa21.49■■□□□ 1.03
CDH11-206ENST00000562998 SMARCC2Q8TAQ2 1214 aa21.49■■□□□ 1.03
CDH11-206ENST00000562998 CUL5Q93034 780 aa21.49■■□□□ 1.03
CDH11-206ENST00000562998 AP5M1Q9H0R1 490 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms