RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 SYDE1Q6ZW31 735 aaPredicted RBP4.46□□□□□ -1.7
CHD9-207ENST00000562806 MAMDC2Q7Z304 686 aaPredicted RBP4.46□□□□□ -1.7
CHD9-207ENST00000562806 KREMEN2Q8NCW0 462 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 C1orf159Q96HA4 380 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 TMEM169Q96HH4 297 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 MTA3Q9BTC8 594 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 AP5M1Q9H0R1 490 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 PCDH18Q9HCL0 1135 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 KLHL14Q9P2G3 628 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 NUB1Q9Y5A7 615 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 NUDT19A8MXV4 375 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 TBX1O43435 398 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 DLX3O60479 287 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 PFKLP17858 780 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 RAP1GAPP47736 663 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 SLC6A11P48066 632 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 KIZQ2M2Z5 673 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 WWC2Q6AWC2 1192 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 SPATC1Q76KD6 591 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 ANKLE2Q86XL3 938 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 Q8N1Y9 231 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 JMYQ8N9B5 988 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.45□□□□□ -1.7
CHD9-207ENST00000562806 SEC14L1Q92503 715 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 TSPAN17Q96FV3 270 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 TRMT2BQ96GJ1 504 aaKnown RBP4.45□□□□□ -1.7
CHD9-207ENST00000562806 DHRS4Q9BTZ2 278 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 RNF38Q9H0F5 515 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 GULP1Q9UBP9 304 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 PFDN2Q9UHV9 154 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 CDK11AQ9UQ88 783 aaPredicted RBP4.45□□□□□ -1.7
CHD9-207ENST00000562806 RWDD3Q9Y3V2 267 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 X6R8D5 127 aa4.45□□□□□ -1.7
CHD9-207ENST00000562806 C22orf46C9J442 243 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 F8W031 263 aaPredicted RBP4.44□□□□□ -1.7
CHD9-207ENST00000562806 RFXAPO00287 272 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 N4BP3O15049 544 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 ADCY3O60266 1144 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 EFCAB14O75071 495 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 FUCA1P04066 466 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 MSL3P1P0C860 447 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 VIPR1P32241 457 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 GPR85P60893 370 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 GABREP78334 506 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 DLG4P78352 724 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 CYP4F3Q08477 520 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 STYK1Q6J9G0 422 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 RPTNQ6XPR3 784 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 USP53Q70EK8 1073 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 CEP68Q76N32 757 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 IFNL3Q8IZI9 196 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 NLGN1Q8N2Q7 840 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 RCBTB1Q8NDN9 531 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 PANK1Q8TE04 598 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 PTPRN2Q92932 1015 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 OSBP2Q969R2 916 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 CHAMP1Q96JM3 812 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 TOX2Q96NM4 488 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 DNAJC7Q99615 494 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 LGR4Q9BXB1 951 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 MCOLN1Q9GZU1 580 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 ZSWIM4Q9H7M6 989 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 GOLGA2P5Q9HBQ8 144 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 NGRNQ9NPE2 291 aaKnown RBP4.44□□□□□ -1.7
CHD9-207ENST00000562806 MARCH2Q9P0N8 246 aa4.44□□□□□ -1.7
CHD9-207ENST00000562806 FAM221BA6H8Z2 402 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 KRIT1O00522 736 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 DGKIO75912 1065 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 EFEMP2O95967 443 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 C8AP07357 584 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 TACR1P25103 407 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 GRIA2P42262 883 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 SF1Q15637 639 aaKnown RBP4.43□□□□□ -1.7
CHD9-207ENST00000562806 INF2Q27J81 1249 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 PRSS53Q2L4Q9 553 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 PLEKHN1Q494U1 663 aaPredicted RBP4.43□□□□□ -1.7
CHD9-207ENST00000562806 ZNF385BQ569K4 471 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 C2orf27AQ580R0 203 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 ZNF648Q5T619 568 aaPredicted RBP4.43□□□□□ -1.7
CHD9-207ENST00000562806 CYP4F22Q6NT55 531 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 TMC6Q7Z403 805 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 CCDC103Q8IW40 242 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 TMEM151BQ8IW70 566 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 SYNPOQ8N3V7 929 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 PLEKHO2Q8TD55 490 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 ALG1Q9BT22 464 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 LNPKQ9C0E8 428 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 EPB41L1Q9H4G0 881 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 PCDHA2Q9Y5H9 948 aa4.43□□□□□ -1.7
CHD9-207ENST00000562806 MYOCOSA0A1B0GUC4 107 aa4.42□□□□□ -1.7
CHD9-207ENST00000562806 DBX1A6NMT0 343 aa4.42□□□□□ -1.7
CHD9-207ENST00000562806 ETV2O00321 342 aaPredicted RBP4.42□□□□□ -1.7
CHD9-207ENST00000562806 GSTA4O15217 222 aa4.42□□□□□ -1.7
CHD9-207ENST00000562806 NCAM1P13591 858 aa4.42□□□□□ -1.7
CHD9-207ENST00000562806 BCL6P41182 706 aa4.42□□□□□ -1.7
CHD9-207ENST00000562806 GALK1P51570 392 aa4.42□□□□□ -1.7
CHD9-207ENST00000562806 PRR5P85299 388 aa4.42□□□□□ -1.7
CHD9-207ENST00000562806 BMS1Q14692 1282 aaKnown RBP4.42□□□□□ -1.7
CHD9-207ENST00000562806 KIR3DS1Q14943 382 aa4.42□□□□□ -1.7
CHD9-207ENST00000562806 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms