RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 CDK5RAP2Q96SN8 1893 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 USO1O60763 962 aaKnown RBP24.21■■□□□ 1.47
LINC00565-201ENST00000562710 PRPF6O94906 941 aaKnown RBP24.21■■□□□ 1.47
LINC00565-201ENST00000562710 REXO1Q8N1G1 1221 aaKnown RBP24.21■■□□□ 1.47
LINC00565-201ENST00000562710 NEDD1Q8NHV4 660 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 IFIH1Q9BYX4 1025 aaKnown RBP24.21■■□□□ 1.47
LINC00565-201ENST00000562710 NDST4Q9H3R1 872 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 BLOC1S4Q9NUP1 217 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 BIN2Q9UBW5 565 aaPredicted RBP24.21■■□□□ 1.47
LINC00565-201ENST00000562710 SNX12Q9UMY4 172 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 LEMD3Q9Y2U8 911 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 RPS6KA4O75676 772 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 SMARCA1P28370 1054 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 TXKP42681 527 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 GRB10Q13322 594 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 C16orf86Q6ZW13 317 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 SLC51AQ86UW1 340 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 C2CD5Q86YS7 1000 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 RTFDC1Q9BY42 306 aaPredicted RBP24.21■■□□□ 1.47
LINC00565-201ENST00000562710 SH2D4AQ9H788 454 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 VAT1LQ9HCJ6 419 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 PCDHA13Q9Y5I0 950 aa24.21■■□□□ 1.47
LINC00565-201ENST00000562710 MYH10P35580 1976 aa24.2■■□□□ 1.46
LINC00565-201ENST00000562710 EPHB6O15197 1021 aa24.2■■□□□ 1.46
LINC00565-201ENST00000562710 MYBL2P10244 700 aa24.2■■□□□ 1.46
LINC00565-201ENST00000562710 C2orf54Q08AI8 447 aa24.2■■□□□ 1.46
LINC00565-201ENST00000562710 UNC13DQ70J99 1090 aa24.2■■□□□ 1.46
LINC00565-201ENST00000562710 CREG2Q8IUH2 290 aa24.2■■□□□ 1.46
LINC00565-201ENST00000562710 SMCR8Q8TEV9 937 aaPredicted RBP24.2■■□□□ 1.46
LINC00565-201ENST00000562710 PIGSQ96S52 555 aa24.2■■□□□ 1.46
LINC00565-201ENST00000562710 CAPN6Q9Y6Q1 641 aa24.2■■□□□ 1.46
LINC00565-201ENST00000562710 MYMKA6NI61 221 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 TACC1O75410 805 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 MTMR9Q96QG7 549 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 FAM207AQ9NSI2 230 aaPredicted RBP24.19■■□□□ 1.46
LINC00565-201ENST00000562710 STK17AQ9UEE5 414 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 LCMT1Q9UIC8 334 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 DDX60LQ5H9U9 1706 aaKnown RBP24.19■■□□□ 1.46
LINC00565-201ENST00000562710 PVALEFA0A1B0GWK0 134 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 KIF11P52732 1056 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 MAN2A1Q16706 1144 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 RC3H1Q5TC82 1133 aaKnown RBP24.19■■□□□ 1.46
LINC00565-201ENST00000562710 GOLGA6L1Q8N7Z2 621 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 GDAP1L1Q96MZ0 367 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 SELENOOQ9BVL4 669 aa24.19■■□□□ 1.46
LINC00565-201ENST00000562710 ABCB11O95342 1321 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 ESYT2A0FGR8 921 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 LCA5LO95447 670 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 SLC20A2Q08357 652 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 SRLQ86TD4 932 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 GSPT2Q8IYD1 628 aaKnown RBP24.18■■□□□ 1.46
LINC00565-201ENST00000562710 AFAP1L1Q8TED9 768 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 LARP4BQ92615 738 aaKnown RBP24.18■■□□□ 1.46
LINC00565-201ENST00000562710 PNMA5Q96PV4 448 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 TMEM260Q9NX78 707 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 MYO1CO00159 1063 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 EIF4A3P38919 411 aaKnown RBP24.18■■□□□ 1.46
LINC00565-201ENST00000562710 BTDP43251 543 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 CALCRLQ16602 461 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 ZNF804AQ7Z570 1209 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 CCDC84Q86UT8 332 aaPredicted RBP24.18■■□□□ 1.46
LINC00565-201ENST00000562710 GUF1Q8N442 669 aaKnown RBP24.18■■□□□ 1.46
LINC00565-201ENST00000562710 MMGT1Q8N4V1 131 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 MMRN2Q9H8L6 949 aa24.18■■□□□ 1.46
LINC00565-201ENST00000562710 FGFR1OPO95684 399 aaKnown RBP24.17■■□□□ 1.46
LINC00565-201ENST00000562710 PRLRP16471 622 aa24.17■■□□□ 1.46
LINC00565-201ENST00000562710 FXR2P51116 673 aaKnown RBP eCLIP24.17■■□□□ 1.46
LINC00565-201ENST00000562710 CCDC70Q6NSX1 233 aa24.17■■□□□ 1.46
LINC00565-201ENST00000562710 ZNF572Q7Z3I7 529 aaPredicted RBP24.17■■□□□ 1.46
LINC00565-201ENST00000562710 CERS3Q8IU89 383 aa24.17■■□□□ 1.46
LINC00565-201ENST00000562710 CEP95Q96GE4 821 aa24.17■■□□□ 1.46
LINC00565-201ENST00000562710 CRACR2AQ9BSW2 395 aa24.17■■□□□ 1.46
LINC00565-201ENST00000562710 DEF6Q9H4E7 631 aa24.17■■□□□ 1.46
LINC00565-201ENST00000562710 MLXIPQ9HAP2 919 aa24.17■■□□□ 1.46
LINC00565-201ENST00000562710 TNRC6CQ9HCJ0 1690 aaKnown RBP24.17■■□□□ 1.46
LINC00565-201ENST00000562710 GNPATO15228 680 aa24.17■■□□□ 1.46
LINC00565-201ENST00000562710 ITIH3Q06033 890 aa24.17■■□□□ 1.46
LINC00565-201ENST00000562710 DYMQ7RTS9 669 aa24.17■■□□□ 1.46
LINC00565-201ENST00000562710 RRP15Q9Y3B9 282 aaKnown RBP24.17■■□□□ 1.46
LINC00565-201ENST00000562710 MOCS3O95396 460 aa24.16■■□□□ 1.46
LINC00565-201ENST00000562710 GGCXP38435 758 aa24.16■■□□□ 1.46
LINC00565-201ENST00000562710 NFIXQ14938 502 aa24.16■■□□□ 1.46
LINC00565-201ENST00000562710 LRRC31Q6UY01 552 aa24.16■■□□□ 1.46
LINC00565-201ENST00000562710 RIN2Q8WYP3 895 aaPredicted RBP24.16■■□□□ 1.46
LINC00565-201ENST00000562710 CDK5RAP3Q96JB5 506 aa24.16■■□□□ 1.46
LINC00565-201ENST00000562710 UBA5Q9GZZ9 404 aa24.16■■□□□ 1.46
LINC00565-201ENST00000562710 LRRC63Q05C16 580 aa24.16■■□□□ 1.46
LINC00565-201ENST00000562710 GRAPQ13588 217 aa24.16■■□□□ 1.46
LINC00565-201ENST00000562710 FOXR1Q6PIV2 292 aa24.16■■□□□ 1.46
LINC00565-201ENST00000562710 GRAPLQ8TC17 118 aaPredicted RBP24.16■■□□□ 1.46
LINC00565-201ENST00000562710 RIOX1Q9H6W3 641 aa24.16■■□□□ 1.46
LINC00565-201ENST00000562710 LRRC53A6NM62 1247 aa24.15■■□□□ 1.46
LINC00565-201ENST00000562710 USP17L5A8MUK1 530 aa24.15■■□□□ 1.46
LINC00565-201ENST00000562710 AKR1B10O60218 316 aa24.15■■□□□ 1.46
LINC00565-201ENST00000562710 TMEM266Q2M3C6 531 aa24.15■■□□□ 1.46
LINC00565-201ENST00000562710 RRAGAQ7L523 313 aa24.15■■□□□ 1.46
LINC00565-201ENST00000562710 TEX11Q8IYF3 940 aa24.15■■□□□ 1.46
LINC00565-201ENST00000562710 AENQ8WTP8 325 aaKnown RBP24.15■■□□□ 1.46
LINC00565-201ENST00000562710 DRC1Q96MC2 740 aa24.15■■□□□ 1.46
LINC00565-201ENST00000562710 GPR101Q96P66 508 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms