RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 C2orf71A6NGG8 1288 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 VAMP4O75379 141 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 PAMP19021 973 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 TACR2P21452 398 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 RGL3Q3MIN7 710 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 GNPTABQ3T906 1256 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 TBC1D10BQ4KMP7 808 aaPredicted RBP5.49□□□□□ -1.53
DENND4A-205ENST00000562540 CRB2Q5IJ48 1285 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 ADAT2Q7Z6V5 191 aaKnown RBP5.49□□□□□ -1.53
DENND4A-205ENST00000562540 ZFPM1Q8IX07 1006 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 LINC00482Q8N8I6 264 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 GORASP1Q9BQQ3 440 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 KLHL25Q9H0H3 589 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 SIT1Q9Y3P8 196 aa5.49□□□□□ -1.53
DENND4A-205ENST00000562540 LTBP3Q9NS15 1303 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 TRBV23OR9-2A0A075B6M9 112 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 NPHP3-ACAD11A0A0J9YXS1 232 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 NPHS1O60500 1241 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 PPP1R11O60927 126 aaPredicted RBP5.48□□□□□ -1.53
DENND4A-205ENST00000562540 THBS2P35442 1172 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 ZNF76P36508 570 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 GDF5P43026 501 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 RBM10P98175 930 aaKnown RBP5.48□□□□□ -1.53
DENND4A-205ENST00000562540 AMPD2Q01433 879 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 KIAA2012Q0VF49 1180 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 BORAQ6PGQ7 559 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 LGI4Q8N135 537 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 CHST13Q8NET6 341 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 PCDH18Q9HCL0 1135 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 CGGBP1Q9UFW8 167 aaPredicted RBP5.48□□□□□ -1.53
DENND4A-205ENST00000562540 INVSQ9Y283 1065 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 ZNF536O15090 1300 aa5.48□□□□□ -1.53
DENND4A-205ENST00000562540 ZBTB7CA1YPR0 619 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 PPM1BO75688 479 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 FUCA1P04066 466 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 NTRK1P04629 796 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 RPL13P26373 211 aaKnown RBP5.47□□□□□ -1.53
DENND4A-205ENST00000562540 ACVRL1P37023 503 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 ZNF394Q53GI3 561 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 ETV3LQ6ZN32 361 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 FAM124AQ86V42 546 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 DCP2Q8IU60 420 aaKnown RBP5.47□□□□□ -1.53
DENND4A-205ENST00000562540 FGD4Q96M96 766 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 C11orf84Q9BUA3 381 aaPredicted RBP5.47□□□□□ -1.53
DENND4A-205ENST00000562540 PHAXQ9H814 394 aaKnown RBP5.47□□□□□ -1.53
DENND4A-205ENST00000562540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.47□□□□□ -1.53
DENND4A-205ENST00000562540 PCDHGB7Q9Y5F8 929 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 SLC12A7Q9Y666 1083 aa5.47□□□□□ -1.53
DENND4A-205ENST00000562540 MROH6A6NGR9 719 aa5.46□□□□□ -1.54
DENND4A-205ENST00000562540 EPHX1P07099 455 aa5.46□□□□□ -1.54
DENND4A-205ENST00000562540 GRB10Q13322 594 aa5.46□□□□□ -1.54
DENND4A-205ENST00000562540 FAM26FQ5R3K3 315 aa5.46□□□□□ -1.54
DENND4A-205ENST00000562540 CCDC81Q6ZN84 652 aa5.46□□□□□ -1.54
DENND4A-205ENST00000562540 KYQ8NBH2 561 aa5.46□□□□□ -1.54
DENND4A-205ENST00000562540 DVL3Q92997 716 aaPredicted RBP5.46□□□□□ -1.54
DENND4A-205ENST00000562540 CRBNQ96SW2 442 aa5.46□□□□□ -1.54
DENND4A-205ENST00000562540 AP5M1Q9H0R1 490 aa5.46□□□□□ -1.54
DENND4A-205ENST00000562540 PCDHB10Q9UN67 800 aa5.46□□□□□ -1.54
DENND4A-205ENST00000562540 C7orf72A4D263 438 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 CYR61O00622 381 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 SLC7A5Q01650 507 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 MCTP2Q6DN12 878 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 GLB1LQ6UWU2 654 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 CD300LDQ6UXZ3 194 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 SPRED1Q7Z699 444 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 ZC3H18Q86VM9 953 aaKnown RBP5.45□□□□□ -1.54
DENND4A-205ENST00000562540 TTLL6Q8N841 843 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 SYT3Q9BQG1 590 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 GZF1Q9H116 711 aaPredicted RBP5.45□□□□□ -1.54
DENND4A-205ENST00000562540 MARCH2Q9P0N8 246 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 ST6GALNAC2Q9UJ37 374 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 SUGT1Q9Y2Z0 365 aa5.45□□□□□ -1.54
DENND4A-205ENST00000562540 LDLRAD1Q5T700 205 aa5.44□□□□□ -1.54
DENND4A-205ENST00000562540 C9orf131Q5VYM1 1079 aa5.44□□□□□ -1.54
DENND4A-205ENST00000562540 STK32CQ86UX6 486 aa5.44□□□□□ -1.54
DENND4A-205ENST00000562540 ARHGEF39Q8N4T4 335 aa5.44□□□□□ -1.54
DENND4A-205ENST00000562540 FAM26EQ8N5C1 309 aa5.44□□□□□ -1.54
DENND4A-205ENST00000562540 KISS1RQ969F8 398 aaPredicted RBP5.44□□□□□ -1.54
DENND4A-205ENST00000562540 CLEC1BQ9P126 229 aa5.44□□□□□ -1.54
DENND4A-205ENST00000562540 ITGA1P56199 1179 aa5.43□□□□□ -1.54
DENND4A-205ENST00000562540 FANCCQ00597 558 aa5.43□□□□□ -1.54
DENND4A-205ENST00000562540 COL9A2Q14055 689 aaPredicted RBP5.43□□□□□ -1.54
DENND4A-205ENST00000562540 CRIP3Q6Q6R5 217 aa5.43□□□□□ -1.54
DENND4A-205ENST00000562540 LIMS2Q7Z4I7 341 aa5.43□□□□□ -1.54
DENND4A-205ENST00000562540 MIB1Q86YT6 1006 aa5.43□□□□□ -1.54
DENND4A-205ENST00000562540 TXNDC5Q8NBS9 432 aaKnown RBP5.43□□□□□ -1.54
DENND4A-205ENST00000562540 PLEKHO2Q8TD55 490 aa5.43□□□□□ -1.54
DENND4A-205ENST00000562540 RCC1LQ96I51 464 aaKnown RBP5.43□□□□□ -1.54
DENND4A-205ENST00000562540 DDX3XO00571 662 aaKnown RBP eCLIP5.42□□□□□ -1.54
DENND4A-205ENST00000562540 SGSM2O43147 1006 aa5.42□□□□□ -1.54
DENND4A-205ENST00000562540 EIF6P56537 245 aaKnown RBP5.42□□□□□ -1.54
DENND4A-205ENST00000562540 MBLAC2Q68D91 279 aa5.42□□□□□ -1.54
DENND4A-205ENST00000562540 TEX2Q8IWB9 1127 aa5.42□□□□□ -1.54
DENND4A-205ENST00000562540 C19orf47Q8N9M1 422 aaKnown RBP5.42□□□□□ -1.54
DENND4A-205ENST00000562540 SH3RF3Q8TEJ3 882 aaPredicted RBP5.42□□□□□ -1.54
DENND4A-205ENST00000562540 KLHL6Q8WZ60 621 aa5.42□□□□□ -1.54
DENND4A-205ENST00000562540 LCORQ96JN0 433 aaPredicted RBP5.42□□□□□ -1.54
DENND4A-205ENST00000562540 SSBP3Q9BWW4 388 aaPredicted RBP5.42□□□□□ -1.54
DENND4A-205ENST00000562540 METTL5Q9NRN9 209 aaKnown RBP5.42□□□□□ -1.54
DENND4A-205ENST00000562540 GINM1Q9NU53 330 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms