RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 NKX2-4Q9H2Z4 354 aa29.53■■■□□ 2.32
NME3-202ENST00000561637 E7EWF7 191 aa29.52■■■□□ 2.32
NME3-202ENST00000561637 DYNC1LI2O43237 492 aaPredicted RBP29.52■■■□□ 2.32
NME3-202ENST00000561637 MRPS5P82675 430 aaKnown RBP29.52■■■□□ 2.32
NME3-202ENST00000561637 SPC25Q9HBM1 224 aa29.52■■■□□ 2.32
NME3-202ENST00000561637 VTA1Q9NP79 307 aa29.52■■■□□ 2.32
NME3-202ENST00000561637 YBX2Q9Y2T7 364 aaKnown RBP29.52■■■□□ 2.32
NME3-202ENST00000561637 RBM8AQ9Y5S9 174 aaKnown RBP29.52■■■□□ 2.32
NME3-202ENST00000561637 XIRP2A4UGR9 3374 aa29.52■■■□□ 2.32
NME3-202ENST00000561637 BDP1A6H8Y1 2624 aa29.51■■■□□ 2.31
NME3-202ENST00000561637 DHX16O60231 1041 aaKnown RBP29.51■■■□□ 2.31
NME3-202ENST00000561637 CD4P01730 458 aa29.51■■■□□ 2.31
NME3-202ENST00000561637 ANTXR2P58335 489 aa29.51■■■□□ 2.31
NME3-202ENST00000561637 NKX3-2P78367 333 aa29.51■■■□□ 2.31
NME3-202ENST00000561637 CXCL17Q6UXB2 119 aa29.51■■■□□ 2.31
NME3-202ENST00000561637 KIAA1211Q6ZU35 1233 aa29.51■■■□□ 2.31
NME3-202ENST00000561637 HERVK_113Q902F9 699 aa29.51■■■□□ 2.31
NME3-202ENST00000561637 UHRF1Q96T88 793 aaPredicted RBP29.51■■■□□ 2.31
NME3-202ENST00000561637 IL23AQ9NPF7 189 aa29.51■■■□□ 2.31
NME3-202ENST00000561637 COL20A1Q9P218 1284 aa29.51■■■□□ 2.31
NME3-202ENST00000561637 UMODL1Q5DID0 1318 aa29.5■■■□□ 2.31
NME3-202ENST00000561637 FSCN1Q16658 493 aaKnown RBP29.5■■■□□ 2.31
NME3-202ENST00000561637 MAP4K1Q92918 833 aa29.5■■■□□ 2.31
NME3-202ENST00000561637 GPHNQ9NQX3 736 aaPredicted RBP29.5■■■□□ 2.31
NME3-202ENST00000561637 ADD3Q9UEY8 706 aaKnown RBP29.5■■■□□ 2.31
NME3-202ENST00000561637 MAD2L2Q9UI95 211 aa29.5■■■□□ 2.31
NME3-202ENST00000561637 MSRAQ9UJ68 235 aa29.5■■■□□ 2.31
NME3-202ENST00000561637 BAZ2BQ9UIF8 2168 aaKnown RBP29.49■■■□□ 2.31
NME3-202ENST00000561637 PPP1R11O60927 126 aaPredicted RBP29.49■■■□□ 2.31
NME3-202ENST00000561637 RAB30Q15771 203 aa29.49■■■□□ 2.31
NME3-202ENST00000561637 MYH6P13533 1939 aa29.48■■■□□ 2.31
NME3-202ENST00000561637 IFIT3O14879 490 aaKnown RBP29.48■■■□□ 2.31
NME3-202ENST00000561637 TLR3O15455 904 aaKnown RBP29.48■■■□□ 2.31
NME3-202ENST00000561637 EDNRBP24530 442 aa29.48■■■□□ 2.31
NME3-202ENST00000561637 TRDNQ13061 729 aa29.48■■■□□ 2.31
NME3-202ENST00000561637 IQSEC1Q6DN90 963 aa29.48■■■□□ 2.31
NME3-202ENST00000561637 LSG1Q9H089 658 aaKnown RBP29.48■■■□□ 2.31
NME3-202ENST00000561637 KLRF2D3W0D1 207 aa29.47■■■□□ 2.31
NME3-202ENST00000561637 MB21D2Q8IYB1 491 aaPredicted RBP29.47■■■□□ 2.31
NME3-202ENST00000561637 SYTL5Q8TDW5 730 aaPredicted RBP29.47■■■□□ 2.31
NME3-202ENST00000561637 NECAB3Q96P71 396 aaPredicted RBP29.47■■■□□ 2.31
NME3-202ENST00000561637 AP5M1Q9H0R1 490 aa29.47■■■□□ 2.31
NME3-202ENST00000561637 PNMA2Q9UL42 364 aa29.47■■■□□ 2.31
NME3-202ENST00000561637 GRIN2DO15399 1336 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 ABCB11O95342 1321 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 OPLAHO14841 1288 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 FGBP02675 491 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 PDE4DQ08499 809 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 OTOP2Q7RTS6 562 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 RALYLQ86SE5 291 aaKnown RBP29.46■■■□□ 2.31
NME3-202ENST00000561637 FBXO11Q86XK2 927 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 COPS5Q92905 334 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 TAAR1Q96RJ0 339 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 ESYT1Q9BSJ8 1104 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 WDR11Q9BZH6 1224 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 SLC28A3Q9HAS3 691 aa29.46■■■□□ 2.31
NME3-202ENST00000561637 PALM3A6NDB9 673 aaPredicted RBP29.45■■■□□ 2.31
NME3-202ENST00000561637 PSMC6P62333 389 aa29.45■■■□□ 2.31
NME3-202ENST00000561637 GRM4Q14833 912 aa29.45■■■□□ 2.31
NME3-202ENST00000561637 DUSP28Q4G0W2 176 aa29.45■■■□□ 2.31
NME3-202ENST00000561637 SLC43A3Q8NBI5 491 aa29.45■■■□□ 2.31
NME3-202ENST00000561637 NCOA7Q8NI08 942 aa29.45■■■□□ 2.31
NME3-202ENST00000561637 RBM47A0AV96 593 aaKnown RBP29.44■■■□□ 2.3
NME3-202ENST00000561637 RABGGTBP53611 331 aa29.44■■■□□ 2.3
NME3-202ENST00000561637 RGS22Q8NE09 1264 aa29.44■■■□□ 2.3
NME3-202ENST00000561637 MTMR8Q96EF0 704 aa29.44■■■□□ 2.3
NME3-202ENST00000561637 ARIH2O95376 493 aa29.43■■■□□ 2.3
NME3-202ENST00000561637 MYOGP15173 224 aa29.43■■■□□ 2.3
NME3-202ENST00000561637 PLA2G5P39877 138 aa29.43■■■□□ 2.3
NME3-202ENST00000561637 CCL23P55773 120 aa29.43■■■□□ 2.3
NME3-202ENST00000561637 WTAPQ15007 396 aa29.43■■■□□ 2.3
NME3-202ENST00000561637 TMEM67Q5HYA8 995 aa29.43■■■□□ 2.3
NME3-202ENST00000561637 CENPQQ7L2Z9 268 aaPredicted RBP29.43■■■□□ 2.3
NME3-202ENST00000561637 PPP1R13LQ8WUF5 828 aa29.43■■■□□ 2.3
NME3-202ENST00000561637 HIPK3Q9H422 1215 aa29.43■■■□□ 2.3
NME3-202ENST00000561637 TRANK1O15050 2925 aa29.42■■■□□ 2.3
NME3-202ENST00000561637 HOMER1Q86YM7 354 aa29.42■■■□□ 2.3
NME3-202ENST00000561637 DNERQ8NFT8 737 aa29.42■■■□□ 2.3
NME3-202ENST00000561637 IGDCC4Q8TDY8 1250 aa29.42■■■□□ 2.3
NME3-202ENST00000561637 MYL10Q9BUA6 226 aa29.42■■■□□ 2.3
NME3-202ENST00000561637 LOC102724159A0A0B4J2E5 919 aa29.41■■■□□ 2.3
NME3-202ENST00000561637 CYTH3O43739 400 aa29.41■■■□□ 2.3
NME3-202ENST00000561637 TFF2Q03403 129 aa29.41■■■□□ 2.3
NME3-202ENST00000561637 TROAPQ12815 778 aa29.41■■■□□ 2.3
NME3-202ENST00000561637 PWP2Q15269 919 aaKnown RBP29.41■■■□□ 2.3
NME3-202ENST00000561637 IL27Q8NEV9 243 aa29.41■■■□□ 2.3
NME3-202ENST00000561637 VWCEQ96DN2 955 aa29.41■■■□□ 2.3
NME3-202ENST00000561637 PIGSQ96S52 555 aa29.41■■■□□ 2.3
NME3-202ENST00000561637 WNT8AQ9H1J5 351 aa29.41■■■□□ 2.3
NME3-202ENST00000561637 Q9Y3F1 56 aa29.41■■■□□ 2.3
NME3-202ENST00000561637 SLC27A2O14975 620 aa29.4■■■□□ 2.3
NME3-202ENST00000561637 BMP1P13497 986 aa29.4■■■□□ 2.3
NME3-202ENST00000561637 ITGA7Q13683 1181 aa29.4■■■□□ 2.3
NME3-202ENST00000561637 MICALL1Q8N3F8 863 aa29.4■■■□□ 2.3
NME3-202ENST00000561637 OR6J1Q8NGC5 347 aa29.4■■■□□ 2.3
NME3-202ENST00000561637 NOC4LQ9BVI4 516 aaKnown RBP29.4■■■□□ 2.3
NME3-202ENST00000561637 TRPV6Q9H1D0 765 aa29.4■■■□□ 2.3
NME3-202ENST00000561637 MTIF3Q9H2K0 278 aaKnown RBP29.4■■■□□ 2.3
NME3-202ENST00000561637 MRPL11Q9Y3B7 192 aaKnown RBP29.4■■■□□ 2.3
NME3-202ENST00000561637 SCN5AQ14524 2016 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms