RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 TRIB2Q92519 343 aa13.89□□□□□ -0.19
IRF9-211ENST00000560852 TNFRSF25Q93038 417 aa13.89□□□□□ -0.19
IRF9-211ENST00000560852 AIFM3Q96NN9 605 aa13.89□□□□□ -0.19
IRF9-211ENST00000560852 MPHOSPH6Q99547 160 aaKnown RBP13.89□□□□□ -0.19
IRF9-211ENST00000560852 ABHD16BQ9H3Z7 469 aa13.89□□□□□ -0.19
IRF9-211ENST00000560852 FLRT1Q9NZU1 646 aa13.89□□□□□ -0.19
IRF9-211ENST00000560852 PTCH2Q9Y6C5 1203 aa13.89□□□□□ -0.19
IRF9-211ENST00000560852 BAZ2BQ9UIF8 2168 aaKnown RBP13.89□□□□□ -0.19
IRF9-211ENST00000560852 MGAMO43451 1857 aa13.89□□□□□ -0.19
IRF9-211ENST00000560852 MAFGO15525 162 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 EIF3JO75822 258 aaKnown RBP13.88□□□□□ -0.19
IRF9-211ENST00000560852 PDCP20941 246 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 CIITAP33076 1130 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 SREBF1P36956 1147 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 NLRP5P59047 1200 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 NKX3-2P78367 333 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 MFSD14CQ5VZR4 134 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 PCNX4Q63HM2 1172 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 REXO1Q8N1G1 1221 aaKnown RBP13.88□□□□□ -0.19
IRF9-211ENST00000560852 FOXP1Q9H334 677 aaPredicted RBP13.88□□□□□ -0.19
IRF9-211ENST00000560852 PCDHA6Q9UN73 950 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 SMC3Q9UQE7 1217 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 PCDHA8Q9Y5H6 950 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 CASP8AP2Q9UKL3 1982 aa13.88□□□□□ -0.19
IRF9-211ENST00000560852 SMCHD1A6NHR9 2005 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 EDIL3O43854 480 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 NR3C2P08235 984 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 ZNF865P0CJ78 1059 aaPredicted RBP13.87□□□□□ -0.19
IRF9-211ENST00000560852 U2AF2P26368 475 aaKnown RBP eCLIP13.87□□□□□ -0.19
IRF9-211ENST00000560852 GJB2P29033 226 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 HOXA13P31271 388 aaPredicted RBP13.87□□□□□ -0.19
IRF9-211ENST00000560852 ICAM3P32942 547 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 USP11P51784 963 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 PGM5Q15124 567 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 CCL14Q16627 93 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 KRT40Q6A162 431 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 ARMCX2Q7L311 632 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 NIPA1Q7RTP0 329 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 FAM184AQ8NB25 1140 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 C8orf76Q96K31 380 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 PURBQ96QR8 312 aaKnown RBP13.87□□□□□ -0.19
IRF9-211ENST00000560852 VTA1Q9NP79 307 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.87□□□□□ -0.19
IRF9-211ENST00000560852 HTTP42858 3142 aa13.87□□□□□ -0.19
IRF9-211ENST00000560852 CYP3A7-CYP3A51PA0A087WV96 503 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 SPDYE3A6NKU9 549 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 ADAMTS3O15072 1205 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 PPFIA3O75145 1194 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 TGFB3P10600 412 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 CYBAP13498 195 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 CYP3A7P24462 503 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 MRPS9P82933 396 aaKnown RBP13.86□□□□□ -0.19
IRF9-211ENST00000560852 CACNB2Q08289 660 aaPredicted RBP13.86□□□□□ -0.19
IRF9-211ENST00000560852 TRIM29Q14134 588 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 BECN1Q14457 450 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 STXBP2Q15833 593 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 ARHGEF16Q5VV41 709 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 MOXD1Q6UVY6 613 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 KRT25Q7Z3Z0 450 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 ZNF333Q96JL9 665 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 MBOAT7Q96N66 472 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 INPP4AQ96PE3 977 aaPredicted RBP13.86□□□□□ -0.19
IRF9-211ENST00000560852 MCOLN1Q9GZU1 580 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 EHMT1Q9H9B1 1298 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 Q9Y3F1 56 aa13.86□□□□□ -0.19
IRF9-211ENST00000560852 DOCK3Q8IZD9 2030 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 RGS20O76081 388 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 UBXN2AP68543 259 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 ACVR2BQ13705 512 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 UBE2SQ16763 222 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 IQSEC1Q6DN90 963 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 TAPT1Q6NXT6 567 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 KCNV1Q6PIU1 500 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 ANO3Q9BYT9 981 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 BRMS1Q9HCU9 246 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 PAK6Q9NQU5 681 aaPredicted RBP13.85□□□□□ -0.19
IRF9-211ENST00000560852 GJB4Q9NTQ9 266 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 KCNJ14Q9UNX9 436 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 UBIAD1Q9Y5Z9 338 aa13.85□□□□□ -0.19
IRF9-211ENST00000560852 MEIS1O00470 390 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 SEPT4O43236 478 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 MSCO60682 206 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 ELNP15502 786 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 CCND2P30279 289 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 CYP2C19P33261 490 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 KRT2P35908 639 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 SAFBQ15424 915 aaKnown RBP eCLIP13.84□□□□□ -0.19
IRF9-211ENST00000560852 SLC9C1Q4G0N8 1177 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 LARP1BQ659C4 914 aaKnown RBP13.84□□□□□ -0.19
IRF9-211ENST00000560852 PPP4R3AQ6IN85 833 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 CCDC62Q6P9F0 684 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 FCHSD1Q86WN1 690 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 DIS3L2Q8IYB7 885 aaKnown RBP13.84□□□□□ -0.19
IRF9-211ENST00000560852 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 BIN2Q9UBW5 565 aaPredicted RBP13.84□□□□□ -0.19
IRF9-211ENST00000560852 CNPY2Q9Y2B0 182 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 ZSWIM8A7E2V4 1837 aa13.84□□□□□ -0.19
IRF9-211ENST00000560852 BTBD18B2RXH4 712 aa13.83□□□□□ -0.2
IRF9-211ENST00000560852 SPATA31C2B4DYI2 1134 aa13.83□□□□□ -0.2
IRF9-211ENST00000560852 NKRFO15226 690 aaKnown RBP eCLIP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms