RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 FGBP02675 491 aa15.84■□□□□ 0.13
SMAD3-214ENST00000560402 ACRP10323 421 aa15.84■□□□□ 0.13
SMAD3-214ENST00000560402 PSMC6P62333 389 aa15.84■□□□□ 0.13
SMAD3-214ENST00000560402 GRIN2CQ14957 1233 aa15.84■□□□□ 0.13
SMAD3-214ENST00000560402 CDC37Q16543 378 aaPredicted RBP15.84■□□□□ 0.13
SMAD3-214ENST00000560402 USH1GQ495M9 461 aa15.84■□□□□ 0.13
SMAD3-214ENST00000560402 ZSCAN10Q96SZ4 725 aaPredicted RBP15.84■□□□□ 0.13
SMAD3-214ENST00000560402 GAS2L1Q99501 681 aaPredicted RBP15.84■□□□□ 0.13
SMAD3-214ENST00000560402 KRT23Q9C075 422 aa15.84■□□□□ 0.13
SMAD3-214ENST00000560402 WNT8AQ9H1J5 351 aa15.84■□□□□ 0.13
SMAD3-214ENST00000560402 MSRAQ9UJ68 235 aa15.84■□□□□ 0.13
SMAD3-214ENST00000560402 MYL3P08590 195 aa15.83■□□□□ 0.12
SMAD3-214ENST00000560402 PTGS1P23219 599 aa15.83■□□□□ 0.12
SMAD3-214ENST00000560402 PTPN11Q06124 597 aaPredicted RBP15.83■□□□□ 0.12
SMAD3-214ENST00000560402 TTLL4Q14679 1199 aa15.83■□□□□ 0.12
SMAD3-214ENST00000560402 TMEM63BQ5T3F8 832 aa15.83■□□□□ 0.12
SMAD3-214ENST00000560402 SKAP1Q86WV1 359 aa15.83■□□□□ 0.12
SMAD3-214ENST00000560402 MCF2L2Q86YR7 1114 aa15.83■□□□□ 0.12
SMAD3-214ENST00000560402 ZKSCAN3Q9BRR0 538 aa15.83■□□□□ 0.12
SMAD3-214ENST00000560402 TRPV6Q9H1D0 765 aa15.83■□□□□ 0.12
SMAD3-214ENST00000560402 TNKSO95271 1327 aa15.83■□□□□ 0.12
SMAD3-214ENST00000560402 UMODL1Q5DID0 1318 aa15.83■□□□□ 0.12
SMAD3-214ENST00000560402 A6NJR5 290 aa15.82■□□□□ 0.12
SMAD3-214ENST00000560402 B4E1Z4 1266 aa15.82■□□□□ 0.12
SMAD3-214ENST00000560402 GOLGA8HP0CJ92 632 aa15.82■□□□□ 0.12
SMAD3-214ENST00000560402 RFC2P35250 354 aa15.82■□□□□ 0.12
SMAD3-214ENST00000560402 CCL23P55773 120 aa15.82■□□□□ 0.12
SMAD3-214ENST00000560402 NFRKBQ6P4R8 1299 aa15.82■□□□□ 0.12
SMAD3-214ENST00000560402 ENAHQ8N8S7 591 aaPredicted RBP15.82■□□□□ 0.12
SMAD3-214ENST00000560402 UBAC1Q9BSL1 405 aa15.82■□□□□ 0.12
SMAD3-214ENST00000560402 SCN5AQ14524 2016 aa15.82■□□□□ 0.12
SMAD3-214ENST00000560402 CHD9Q3L8U1 2897 aa15.81■□□□□ 0.12
SMAD3-214ENST00000560402 PITPNM1O00562 1244 aa15.81■□□□□ 0.12
SMAD3-214ENST00000560402 PARP1P09874 1014 aaKnown RBP15.81■□□□□ 0.12
SMAD3-214ENST00000560402 TXNP10599 105 aaKnown RBP15.81■□□□□ 0.12
SMAD3-214ENST00000560402 MYO9BQ13459 2157 aa15.81■□□□□ 0.12
SMAD3-214ENST00000560402 C8orf34Q49A92 452 aa15.81■□□□□ 0.12
SMAD3-214ENST00000560402 ADGRF4Q8IZF3 695 aa15.81■□□□□ 0.12
SMAD3-214ENST00000560402 SYMPKQ92797 1274 aaKnown RBP15.81■□□□□ 0.12
SMAD3-214ENST00000560402 IWS1Q96ST2 819 aa15.81■□□□□ 0.12
SMAD3-214ENST00000560402 UBA5Q9GZZ9 404 aa15.81■□□□□ 0.12
SMAD3-214ENST00000560402 MRPL11Q9Y3B7 192 aaKnown RBP15.81■□□□□ 0.12
SMAD3-214ENST00000560402 GRXCR1A8MXD5 290 aa15.8■□□□□ 0.12
SMAD3-214ENST00000560402 PBX2P40425 430 aa15.8■□□□□ 0.12
SMAD3-214ENST00000560402 IFIT1BQ5T764 474 aaKnown RBP15.8■□□□□ 0.12
SMAD3-214ENST00000560402 OTOP2Q7RTS6 562 aa15.8■□□□□ 0.12
SMAD3-214ENST00000560402 FBXO11Q86XK2 927 aa15.8■□□□□ 0.12
SMAD3-214ENST00000560402 SYTL5Q8TDW5 730 aaPredicted RBP15.8■□□□□ 0.12
SMAD3-214ENST00000560402 NSUN6Q8TEA1 469 aaKnown RBP15.8■□□□□ 0.12
SMAD3-214ENST00000560402 TRMT13Q9NUP7 481 aaKnown RBP15.8■□□□□ 0.12
SMAD3-214ENST00000560402 CXXC1Q9P0U4 656 aaPredicted RBP15.8■□□□□ 0.12
SMAD3-214ENST00000560402 ZSWIM5Q9P217 1185 aa15.8■□□□□ 0.12
SMAD3-214ENST00000560402 SLC4A7Q9Y6M7 1214 aa15.8■□□□□ 0.12
SMAD3-214ENST00000560402 DHX16O60231 1041 aaKnown RBP15.79■□□□□ 0.12
SMAD3-214ENST00000560402 ACTN1P12814 892 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 GHRHRQ02643 423 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 QRICH1Q2TAL8 776 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 NBPF20Q3BBV1 942 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 FAM47CQ5HY64 1035 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 CCDC62Q6P9F0 684 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 CCDC155Q8N6L0 562 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 SCLYQ96I15 445 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 CPVLQ9H3G5 476 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 SLC28A3Q9HAS3 691 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 VCANP13611 3396 aa15.79■□□□□ 0.12
SMAD3-214ENST00000560402 SPTBN5Q9NRC6 3674 aaKnown RBP15.79■□□□□ 0.12
SMAD3-214ENST00000560402 ZBBXA8MT70 800 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 ARIH2O95376 493 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 GH1P01241 217 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 MMP3P08254 477 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 CYP2C9P11712 490 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 TRAF1Q13077 416 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 BFSP2Q13515 415 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 STXBP2Q15833 593 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 SESTD1Q86VW0 696 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 SAMD3Q8N6K7 520 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 COPS5Q92905 334 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 RMDN3Q96TC7 470 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 AMNQ9BXJ7 453 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 MAP3K20Q9NYL2 800 aaKnown RBP15.78■□□□□ 0.12
SMAD3-214ENST00000560402 NOD1Q9Y239 953 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 PCDHA11Q9Y5I1 949 aa15.78■□□□□ 0.12
SMAD3-214ENST00000560402 MYH7BA7E2Y1 1941 aa15.77■□□□□ 0.12
SMAD3-214ENST00000560402 TRDNQ13061 729 aa15.77■□□□□ 0.12
SMAD3-214ENST00000560402 RETREG2Q8NC44 543 aa15.77■□□□□ 0.12
SMAD3-214ENST00000560402 CAGE1Q8TC20 777 aa15.77■□□□□ 0.12
SMAD3-214ENST00000560402 RUFY2Q8WXA3 655 aa15.77■□□□□ 0.12
SMAD3-214ENST00000560402 EMID1Q96A84 441 aaPredicted RBP15.77■□□□□ 0.12
SMAD3-214ENST00000560402 IPO9Q96P70 1041 aaKnown RBP15.77■□□□□ 0.12
SMAD3-214ENST00000560402 SLC9A7Q96T83 725 aa15.77■□□□□ 0.12
SMAD3-214ENST00000560402 NKX2-4Q9H2Z4 354 aa15.77■□□□□ 0.12
SMAD3-214ENST00000560402 PRDM12Q9H4Q4 367 aa15.77■□□□□ 0.12
SMAD3-214ENST00000560402 JMJD4Q9H9V9 463 aa15.77■□□□□ 0.12
SMAD3-214ENST00000560402 CHD7Q9P2D1 2997 aa15.77■□□□□ 0.11
SMAD3-214ENST00000560402 TRIP12Q14669 1992 aaPredicted RBP15.76■□□□□ 0.11
SMAD3-214ENST00000560402 ATP2A2P16615 1042 aaKnown RBP15.76■□□□□ 0.11
SMAD3-214ENST00000560402 HSD17B4P51659 736 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 ARHGAP1Q07960 439 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 SEC23AQ15436 765 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 BMP2KLQ5H9B9 411 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms