RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 TGS1Q96RS0 853 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 CTAGE1Q96RT6 745 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 ZBED2Q9BTP6 218 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 CCPG1Q9ULG6 757 aa15.22■□□□□ 0.03
RABGGTA-213ENST00000560127 PTPRZ1P23471 2315 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 ZFHX2Q9C0A1 2572 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 POTEB3A0JP26 581 aa15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 A6NJR5 290 aa15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 RBAK-RBAKDNI3L0D1 243 aa15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 GJB5O95377 273 aa15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 TDO2P48775 406 aa15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 POTEBQ6S5H4 581 aa15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 COPS5Q92905 334 aa15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 RAD9AQ99638 391 aa15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 KCNH6Q9H252 994 aa15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 ADD3Q9UEY8 706 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 NOD1Q9Y239 953 aa15.21■□□□□ 0.03
RABGGTA-213ENST00000560127 LOC102724159A0A0B4J2E5 919 aa15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 DCXO43602 365 aa15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 KPNA6O60684 536 aa15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 ICAM1P05362 532 aa15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 HNRNPUQ00839 825 aaKnown RBP eCLIP15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 TFAP4Q01664 338 aa15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 PWP2Q15269 919 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 BRDTQ58F21 947 aaPredicted RBP15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 RCSD1Q6JBY9 416 aa15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 CNKSR3Q6P9H4 555 aa15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 CAGE1Q8TC20 777 aa15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 AFAP1L1Q8TED9 768 aa15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 DHX38Q92620 1227 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-213ENST00000560127 RAD50Q92878 1312 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 RIF1Q5UIP0 2472 aaKnown RBP15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 NFIBO00712 420 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 NKRFO15226 690 aaKnown RBP eCLIP15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 GPAA1O43292 621 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 NBNO60934 754 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 HMMRO75330 724 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 CXCL10P02778 98 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 SELPP16109 830 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 PPP2R5BQ15173 497 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 PTGISQ16647 500 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 NEK9Q8TD19 979 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 APPBP2Q92624 585 aa15.19■□□□□ 0.02
RABGGTA-213ENST00000560127 MYH6P13533 1939 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 M0R2C6 588 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 APPP05067 770 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 CHMP4BP1P59074 171 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 PDE4BQ07343 736 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 PUS10Q3MIT2 529 aaKnown RBP15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 GDF6Q6KF10 455 aaPredicted RBP15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 SLC30A10Q6XR72 485 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 LRRC8DQ7L1W4 858 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 IFNL3Q8IZI9 196 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 CCDC155Q8N6L0 562 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 ANKS1AQ92625 1134 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 C17orf80Q9BSJ5 609 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 RANBP17Q9H2T7 1088 aaKnown RBP15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 RALGAPA2Q2PPJ7 1873 aa15.18■□□□□ 0.02
RABGGTA-213ENST00000560127 ABHD14A-ACY1A0A1B0GW23 586 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 PTPDC1A2A3K4 754 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 PATL2C9JE40 543 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 H3BQ06 376 aaPredicted RBP15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 ARIH2O95376 493 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 GNAT2P19087 354 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 EDNRBP24530 442 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 RBL2Q08999 1139 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 FAM117BQ6P1L5 589 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 SESTD1Q86VW0 696 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 KBTBD3Q8NAB2 608 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 SCFD2Q8WU76 684 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 IL17RBQ9NRM6 502 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 STX8Q9UNK0 236 aa15.17■□□□□ 0.02
RABGGTA-213ENST00000560127 RNF113AO15541 343 aaKnown RBP15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 NMT2O60551 498 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 TXNP10599 105 aaKnown RBP15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 CKBP12277 381 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 CALML3P27482 149 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 ZP2Q05996 745 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 PDE4DQ08499 809 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 TTBK2Q6IQ55 1244 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 HFE2Q6ZVN8 426 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 FBXO22Q8NEZ5 403 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 CLEC4DQ8WXI8 215 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 KAT2BQ92831 832 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 MRPL38Q96DV4 380 aaKnown RBP15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 MTMR7Q9Y216 660 aa15.16■□□□□ 0.02
RABGGTA-213ENST00000560127 C19orf67A6NJJ6 358 aa15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 SMARCA5O60264 1052 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 PARNO95453 639 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 SLC16A2P36021 539 aa15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 PPARAQ07869 468 aa15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 TRAF7Q6Q0C0 670 aa15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 RNF207Q6ZRF8 634 aa15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 AFG1LQ8WV93 481 aa15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 PHOX2BQ99453 314 aa15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 ECHDC1Q9NTX5 307 aa15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 ZBTB40Q9NUA8 1239 aa15.15■□□□□ 0.02
RABGGTA-213ENST00000560127 WDR87Q6ZQQ6 2873 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 FAM186AA6NE01 2351 aa15.14■□□□□ 0.01
RABGGTA-213ENST00000560127 EFCAB14O75071 495 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms