RNA–Protein interactions for RNA: ENST00000560045.1

IGKV2D-40-202, Transcript of immunoglobulin kappa variable 2D-40, humanhuman

APPRIS ALT2 BASIC

Gene IGKV2D-40, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-40-202ENST00000560045 CCDC62Q6P9F0 684 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CASC1Q6TDU7 716 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 EEPD1Q7L9B9 569 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CATIPQ7Z7H3 387 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 SGMS1Q86VZ5 419 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 ZNF654Q8IZM8 581 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 BADQ92934 168 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 DDX49Q9Y6V7 483 aaKnown RBP12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 LAMA2P24043 3122 aaKnown RBP12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 A6NJR5 290 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 DYNC1LI2O43237 492 aaPredicted RBP12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 KPNA6O60684 536 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CDC45O75419 566 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TIMP1P01033 207 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 RAG1P15918 1043 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PURAQ00577 322 aaKnown RBP12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 BRDTQ58F21 947 aaPredicted RBP12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CXCL17Q6UXB2 119 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 NOL8Q76FK4 1167 aaKnown RBP12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 EMID1Q96A84 441 aaPredicted RBP12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 RMDN3Q96TC7 470 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 LZTS2Q9BRK4 669 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 SENP2Q9HC62 589 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 ANO2Q9NQ90 1003 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PXMP2Q9NR77 195 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TMEM39AQ9NV64 488 aa12.67□□□□□ -0.38
IGKV2D-40-202ENST00000560045 GRIN2DO15399 1336 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PNMA6FA0A0J9YX94 578 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PRC1O43663 620 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CALM1P0DP23 149 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CALM2P0DP24 149 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CALM3P0DP25 149 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 GNAQP50148 359 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 FPGSQ05932 587 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 ITGA7Q13683 1181 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 STXBP2Q15833 593 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TMEM63BQ5T3F8 832 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 MFSD5Q6N075 450 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 OR6J1Q8NGC5 347 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PIGSQ96S52 555 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PDCD2LQ9BRP1 358 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PCDHA1Q9Y5I3 950 aa12.66□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TMEM265A0A087WTH1 108 aa12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 EIF3JO75822 258 aaKnown RBP12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 ARIH2O95376 493 aa12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CFBP00751 764 aa12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 RCAN1P53805 252 aa12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 SMAD3P84022 425 aaKnown RBP12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PTPN11Q06124 597 aaPredicted RBP12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PPIGQ13427 754 aaKnown RBP eCLIP12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 ARHGEF16Q5VV41 709 aa12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TBC1D5Q92609 795 aa12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 MTG1Q9BT17 334 aaPredicted RBP12.65□□□□□ -0.38
IGKV2D-40-202ENST00000560045 BAZ2BQ9UIF8 2168 aaKnown RBP12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 PIK3CDO00329 1044 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 STAM2O75886 525 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 GH1P01241 217 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 NR3C2P08235 984 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 TXNP10599 105 aaKnown RBP12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 HOXD8P13378 290 aaPredicted RBP12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 PTGS1P23219 599 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 ARHGAP1Q07960 439 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 KRT32Q14532 448 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 PGM5Q15124 567 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 SHHQ15465 462 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 C9orf50Q5SZB4 431 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 NFRKBQ6P4R8 1299 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 KCNV1Q6PIU1 500 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 CHST3Q7LGC8 479 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 SESTD1Q86VW0 696 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 HOMER1Q86YM7 354 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 ALDH8A1Q9H2A2 487 aaPredicted RBP12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 VAT1LQ9HCJ6 419 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 NID2Q14112 1375 aa12.64□□□□□ -0.39
IGKV2D-40-202ENST00000560045 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 GCOM1H8Y6P7 765 aaPredicted RBP12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 B4GALT4O60513 344 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 MMP3P08254 477 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 SUPT20HL2P0C7V6 817 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 POLR2MP0CAP2 368 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 TGFB3P10600 412 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 EIF2AK2P19525 551 aaKnown RBP12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 RASIP1Q5U651 963 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 PSRC1Q6PGN9 363 aaPredicted RBP12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 VSIG10LQ86VR7 867 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 TMEM199Q8N511 208 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 KCNB2Q92953 911 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 VTI1AQ96AJ9 217 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 CCDC136Q96JN2 1154 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 NEK1Q96PY6 1258 aa12.63□□□□□ -0.39
IGKV2D-40-202ENST00000560045 MYH7BA7E2Y1 1941 aa12.62□□□□□ -0.39
IGKV2D-40-202ENST00000560045 F2P00734 622 aa12.62□□□□□ -0.39
IGKV2D-40-202ENST00000560045 PFKMP08237 780 aa12.62□□□□□ -0.39
IGKV2D-40-202ENST00000560045 HMGB1P09429 215 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms