RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 JAKMIP3Q5VZ66 844 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 NOSTRINQ8IVI9 506 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 SYTL5Q8TDW5 730 aaPredicted RBP10.75□□□□□ -0.69
HERC1-206ENST00000559996 SMCR8Q8TEV9 937 aaPredicted RBP10.75□□□□□ -0.69
HERC1-206ENST00000559996 CCDC12Q8WUD4 166 aaPredicted RBP10.75□□□□□ -0.69
HERC1-206ENST00000559996 CUL5Q93034 780 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 PGBD1Q96JS3 809 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 FGD4Q96M96 766 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 TAAR1Q96RJ0 339 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 MAF1Q9H063 256 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 ZFYVE28Q9HCC9 887 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 HOMER2Q9NSB8 354 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 MAP3K20Q9NYL2 800 aaKnown RBP10.75□□□□□ -0.69
HERC1-206ENST00000559996 CYP39A1Q9NYL5 469 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 ZNFX1Q9P2E3 1918 aaKnown RBP10.75□□□□□ -0.69
HERC1-206ENST00000559996 DOCK3Q8IZD9 2030 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 GCOM1H8Y6P7 765 aaPredicted RBP10.74□□□□□ -0.69
HERC1-206ENST00000559996 TRPA1O75762 1119 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 ALDH1A1P00352 501 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 CFBP00751 764 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 IGHA2P01877 340 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 POLR2MP0CAP2 368 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 TRIM29Q14134 588 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 MYSM1Q5VVJ2 828 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 SLC30A10Q6XR72 485 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 CLEC17AQ6ZS10 378 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 TEX2Q8IWB9 1127 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 TNPO1Q92973 898 aaKnown RBP10.74□□□□□ -0.69
HERC1-206ENST00000559996 GLT8D2Q9H1C3 349 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 ZSCAN16Q9H4T2 348 aaPredicted RBP10.74□□□□□ -0.69
HERC1-206ENST00000559996 ACAD9Q9H845 621 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 GJD2Q9UKL4 321 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 RPTORQ8N122 1335 aa10.74□□□□□ -0.69
HERC1-206ENST00000559996 SOWAHBA6NEL2 793 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 COBLO75128 1261 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 CNTN2Q02246 1040 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 MORN1Q5T089 497 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 MCTP1Q6DN14 999 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 RNF207Q6ZRF8 634 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 PIK3AP1Q6ZUJ8 805 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 GPR142Q7Z601 462 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 NCAPG2Q86XI2 1143 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 MCF2L2Q86YR7 1114 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 C4orf32Q8N8J7 132 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 FAM133AQ8N9E0 248 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 BICD2Q8TD16 824 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 USP6NLQ92738 828 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 MROH8Q9H579 483 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 FBXO40Q9UH90 709 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 BOLA1Q9Y3E2 137 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 CTDP1Q9Y5B0 961 aaPredicted RBP10.73□□□□□ -0.69
HERC1-206ENST00000559996 FRMPD4Q14CM0 1322 aa10.73□□□□□ -0.69
HERC1-206ENST00000559996 PLXNB2O15031 1838 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 MYH7BA7E2Y1 1941 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 TCHHQ07283 1943 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 FOSP01100 380 aaPredicted RBP10.72□□□□□ -0.69
HERC1-206ENST00000559996 CYP3A4P08684 503 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 PTPREP23469 700 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 COPB2P35606 906 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 DNM1Q05193 864 aaKnown RBP10.72□□□□□ -0.69
HERC1-206ENST00000559996 AP3B2Q13367 1082 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 NBR1Q14596 966 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 PTPAQ15257 358 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 SAFBQ15424 915 aaKnown RBP eCLIP10.72□□□□□ -0.69
HERC1-206ENST00000559996 INF2Q27J81 1249 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 ZNF792Q3KQV3 632 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 NSMFQ6X4W1 530 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 KRT25Q7Z3Z0 450 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 BRAPQ7Z569 592 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 REXO1Q8N1G1 1221 aaKnown RBP10.72□□□□□ -0.69
HERC1-206ENST00000559996 TBCKQ8TEA7 893 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 MBOAT7Q96N66 472 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 USP28Q96RU2 1077 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 ANO3Q9BYT9 981 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 FTOQ9C0B1 505 aaKnown RBP eCLIP10.72□□□□□ -0.69
HERC1-206ENST00000559996 ARHGAP39Q9C0H5 1083 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 WBP1LQ9NX94 342 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
HERC1-206ENST00000559996 CLIC4Q9Y696 253 aa10.72□□□□□ -0.69
HERC1-206ENST00000559996 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
HERC1-206ENST00000559996 CYP3A7-CYP3A51PA0A087WV96 503 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 ZSWIM8A7E2V4 1837 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 STRNO43815 780 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 PCNTO95613 3336 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 PGK2P07205 417 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 CYP3A7P24462 503 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 CIITAP33076 1130 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 SREBF1P36956 1147 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 CCNA1P78396 465 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 MRPS9P82933 396 aaKnown RBP10.71□□□□□ -0.69
HERC1-206ENST00000559996 GRB14Q14449 540 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 NONOQ15233 471 aaKnown RBP eCLIP10.71□□□□□ -0.69
HERC1-206ENST00000559996 FCHSD1Q86WN1 690 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 ABRAQ8N0Z2 381 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 IL31RAQ8NI17 732 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 MORC4Q8TE76 937 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 PDCD2LQ9BRP1 358 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 PXMP2Q9NR77 195 aa10.71□□□□□ -0.69
HERC1-206ENST00000559996 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.71□□□□□ -0.69
HERC1-206ENST00000559996 PCDHB6Q9Y5E3 794 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms