RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 CTU1Q7Z7A3 348 aaKnown RBP16.4■□□□□ 0.22
SMAD6-204ENST00000559931 FAM133AQ8N9E0 248 aa16.4■□□□□ 0.22
SMAD6-204ENST00000559931 RAET1EQ8TD07 263 aa16.4■□□□□ 0.22
SMAD6-204ENST00000559931 NSUN6Q8TEA1 469 aaKnown RBP16.4■□□□□ 0.22
SMAD6-204ENST00000559931 PGBD1Q96JS3 809 aa16.4■□□□□ 0.22
SMAD6-204ENST00000559931 COL20A1Q9P218 1284 aa16.4■□□□□ 0.22
SMAD6-204ENST00000559931 SRRDQ9UH36 339 aa16.4■□□□□ 0.22
SMAD6-204ENST00000559931 MYCLP12524 364 aaPredicted RBP16.39■□□□□ 0.21
SMAD6-204ENST00000559931 PDIA4P13667 645 aaKnown RBP16.39■□□□□ 0.21
SMAD6-204ENST00000559931 EIF2AK2P19525 551 aaKnown RBP16.39■□□□□ 0.21
SMAD6-204ENST00000559931 UBXN2AP68543 259 aa16.39■□□□□ 0.21
SMAD6-204ENST00000559931 GHRHRQ02643 423 aa16.39■□□□□ 0.21
SMAD6-204ENST00000559931 NR5A1Q13285 461 aa16.39■□□□□ 0.21
SMAD6-204ENST00000559931 AP3B2Q13367 1082 aa16.39■□□□□ 0.21
SMAD6-204ENST00000559931 ZNF792Q3KQV3 632 aa16.39■□□□□ 0.21
SMAD6-204ENST00000559931 FOXD4L5Q5VV16 416 aaPredicted RBP16.39■□□□□ 0.21
SMAD6-204ENST00000559931 OTOP1Q7RTM1 612 aa16.39■□□□□ 0.21
SMAD6-204ENST00000559931 KRT25Q7Z3Z0 450 aa16.39■□□□□ 0.21
SMAD6-204ENST00000559931 DNERQ8NFT8 737 aa16.39■□□□□ 0.21
SMAD6-204ENST00000559931 FOXD4L4Q8WXT5 416 aaPredicted RBP16.39■□□□□ 0.21
SMAD6-204ENST00000559931 ANO3Q9BYT9 981 aa16.39■□□□□ 0.21
SMAD6-204ENST00000559931 SOWAHBA6NEL2 793 aa16.38■□□□□ 0.21
SMAD6-204ENST00000559931 CLK2P49760 499 aaKnown RBP16.38■□□□□ 0.21
SMAD6-204ENST00000559931 ALDH5A1P51649 535 aaPredicted RBP16.38■□□□□ 0.21
SMAD6-204ENST00000559931 PRMT2P55345 433 aa16.38■□□□□ 0.21
SMAD6-204ENST00000559931 PDE4DQ08499 809 aa16.38■□□□□ 0.21
SMAD6-204ENST00000559931 NONOQ15233 471 aaKnown RBP eCLIP16.38■□□□□ 0.219e-7■■■□□ 18.7
SMAD6-204ENST00000559931 NPY5RQ15761 445 aa16.38■□□□□ 0.21
SMAD6-204ENST00000559931 PIK3AP1Q6ZUJ8 805 aa16.38■□□□□ 0.21
SMAD6-204ENST00000559931 NPLOC4Q8TAT6 608 aa16.38■□□□□ 0.21
SMAD6-204ENST00000559931 USP6NLQ92738 828 aa16.38■□□□□ 0.21
SMAD6-204ENST00000559931 APBA2Q99767 749 aa16.38■□□□□ 0.21
SMAD6-204ENST00000559931 FOXP1Q9H334 677 aaPredicted RBP16.38■□□□□ 0.21
SMAD6-204ENST00000559931 PXMP2Q9NR77 195 aa16.38■□□□□ 0.21
SMAD6-204ENST00000559931 DIS3Q9Y2L1 958 aaKnown RBP16.38■□□□□ 0.21
SMAD6-204ENST00000559931 ASB14A6NK59 587 aa16.37■□□□□ 0.21
SMAD6-204ENST00000559931 ZNF76P36508 570 aa16.37■□□□□ 0.21
SMAD6-204ENST00000559931 FERMT3Q86UX7 667 aa16.37■□□□□ 0.21
SMAD6-204ENST00000559931 MAML3Q96JK9 1138 aa16.37■□□□□ 0.21
SMAD6-204ENST00000559931 MCOLN1Q9GZU1 580 aa16.37■□□□□ 0.21
SMAD6-204ENST00000559931 M0R2N6 131 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 NR3C2P08235 984 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 HOXC6P09630 235 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 XRCC5P13010 732 aaKnown RBP16.36■□□□□ 0.21
SMAD6-204ENST00000559931 ATP2B1P20020 1258 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 CCND2P30279 289 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 PGM5Q15124 567 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 CCL14Q16627 93 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 INF2Q27J81 1249 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 NOSTRINQ8IVI9 506 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 TBCKQ8TEA7 893 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 IWS1Q96ST2 819 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 MTMR6Q9Y217 621 aa16.36■□□□□ 0.21
SMAD6-204ENST00000559931 MCM3APO60318 1980 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 KIF28PB7ZC32 967 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 ADCY3O60266 1144 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 U2AF2P26368 475 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMAD6-204ENST00000559931 ARHGAP4P98171 946 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 STXBP2Q15833 593 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 MFSD14CQ5VZR4 134 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 ZNF467Q7Z7K2 595 aaPredicted RBP16.35■□□□□ 0.21
SMAD6-204ENST00000559931 TRMT44Q8IYL2 757 aaKnown RBP16.35■□□□□ 0.21
SMAD6-204ENST00000559931 TNS4Q8IZW8 715 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 ZFP91Q96JP5 570 aaPredicted RBP16.35■□□□□ 0.21
SMAD6-204ENST00000559931 PDCD2LQ9BRP1 358 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 TINF2Q9BSI4 451 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 RTEL1Q9NZ71 1219 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 NOL7Q9UMY1 257 aaKnown RBP16.35■□□□□ 0.21
SMAD6-204ENST00000559931 DDX49Q9Y6V7 483 aaKnown RBP16.35■□□□□ 0.21
SMAD6-204ENST00000559931 ZNF236Q9UL36 1845 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 MYH7BA7E2Y1 1941 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 LCTP09848 1927 aa16.35■□□□□ 0.21
SMAD6-204ENST00000559931 FAM205CA6NFA0 338 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 ZSCAN22P10073 491 aaPredicted RBP16.34■□□□□ 0.21
SMAD6-204ENST00000559931 ELNP15502 786 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 SREBF1P36956 1147 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 IRF5Q13568 498 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 PCNX4Q63HM2 1172 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 OLFML2BQ68BL8 750 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 ARMCX2Q7L311 632 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 EEPD1Q7L9B9 569 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 TNFRSF25Q93038 417 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 FGD4Q96M96 766 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 FLRT1Q9NZU1 646 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 CNPY2Q9Y2B0 182 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 ASTN1O14525 1302 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 RPTORQ8N122 1335 aa16.34■□□□□ 0.21
SMAD6-204ENST00000559931 LOC102724159A0A0B4J2E5 919 aa16.33■□□□□ 0.2
SMAD6-204ENST00000559931 EIF3JO75822 258 aaKnown RBP16.33■□□□□ 0.2
SMAD6-204ENST00000559931 CYP2C19P33261 490 aa16.33■□□□□ 0.2
SMAD6-204ENST00000559931 USP11P51784 963 aa16.33■□□□□ 0.2
SMAD6-204ENST00000559931 NUCB2P80303 420 aa16.33■□□□□ 0.2
SMAD6-204ENST00000559931 PKP1Q13835 747 aa16.33■□□□□ 0.2
SMAD6-204ENST00000559931 PWP2Q15269 919 aaKnown RBP16.33■□□□□ 0.2
SMAD6-204ENST00000559931 LETM2Q2VYF4 491 aa16.33■□□□□ 0.2
SMAD6-204ENST00000559931 EARS2Q5JPH6 523 aaKnown RBP16.33■□□□□ 0.2
SMAD6-204ENST00000559931 XRRA1Q6P2D8 792 aa16.33■□□□□ 0.2
SMAD6-204ENST00000559931 BRAPQ7Z569 592 aa16.33■□□□□ 0.2
SMAD6-204ENST00000559931 NEK8Q86SG6 692 aa16.33■□□□□ 0.2
SMAD6-204ENST00000559931 VSIG10LQ86VR7 867 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms