RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 ACRP10323 421 aa14.28□□□□□ -0.12
SPG11-219ENST00000559822 COL6A3P12111 3177 aa14.28□□□□□ -0.12
SPG11-219ENST00000559822 MYH6P13533 1939 aa14.28□□□□□ -0.12
SPG11-219ENST00000559822 STXBP2Q15833 593 aa14.28□□□□□ -0.12
SPG11-219ENST00000559822 RASIP1Q5U651 963 aa14.28□□□□□ -0.12
SPG11-219ENST00000559822 ZNF365Q70YC5 407 aa14.28□□□□□ -0.12
SPG11-219ENST00000559822 C16orf59Q7L2K0 433 aa14.28□□□□□ -0.12
SPG11-219ENST00000559822 SYTL5Q8TDW5 730 aaPredicted RBP14.28□□□□□ -0.12
SPG11-219ENST00000559822 RMDN3Q96TC7 470 aa14.28□□□□□ -0.12
SPG11-219ENST00000559822 TTYH1Q9H313 450 aaPredicted RBP14.28□□□□□ -0.12
SPG11-219ENST00000559822 VAT1LQ9HCJ6 419 aa14.28□□□□□ -0.12
SPG11-219ENST00000559822 MAP3K20Q9NYL2 800 aaKnown RBP14.28□□□□□ -0.12
SPG11-219ENST00000559822 KLRF2D3W0D1 207 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 FGBP02675 491 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 PFKMP08237 780 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 FOSL2P15408 326 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 CHMLP26374 656 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 PTPN11Q06124 597 aaPredicted RBP14.27□□□□□ -0.13
SPG11-219ENST00000559822 SEC23AQ15436 765 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 FAM47CQ5HY64 1035 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 ARHGEF16Q5VV41 709 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 NFRKBQ6P4R8 1299 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 SAMD3Q8N6K7 520 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 MAFAQ8NHW3 353 aaPredicted RBP14.27□□□□□ -0.13
SPG11-219ENST00000559822 HERVK_113Q902F9 699 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 TIFAQ96CG3 184 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 IL25Q9H293 177 aa14.27□□□□□ -0.13
SPG11-219ENST00000559822 IFIT3O14879 490 aaKnown RBP14.26□□□□□ -0.13
SPG11-219ENST00000559822 ZBTB5O15062 677 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 CFBP00751 764 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 GH1P01241 217 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 CYP21A2P08686 494 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 CCL23P55773 120 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 RAB30Q15771 203 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 SEPT14Q6ZU15 432 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 CYB5R4Q7L1T6 521 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.26□□□□□ -0.13
SPG11-219ENST00000559822 STAG2Q8N3U4 1231 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 NCOA7Q8NI08 942 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 MYLIPQ8WY64 445 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 TAAR1Q96RJ0 339 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 MAD2L2Q9UI95 211 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 MSRAQ9UJ68 235 aa14.26□□□□□ -0.13
SPG11-219ENST00000559822 SCN10AQ9Y5Y9 1956 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 UMODL1Q5DID0 1318 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 PALM3A6NDB9 673 aaPredicted RBP14.25□□□□□ -0.13
SPG11-219ENST00000559822 SGSM2O43147 1006 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 EIF3JO75822 258 aaKnown RBP14.25□□□□□ -0.13
SPG11-219ENST00000559822 HSD17B4P51659 736 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 GHRHRQ02643 423 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 WTAPQ15007 396 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 NBPF20Q3BBV1 942 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 CCDC62Q6P9F0 684 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 TBC1D5Q92609 795 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 COPS5Q92905 334 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 MTMR8Q96EF0 704 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 WNT8AQ9H1J5 351 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 ZNF576Q9H609 170 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 TRMT13Q9NUP7 481 aaKnown RBP14.25□□□□□ -0.13
SPG11-219ENST00000559822 COL20A1Q9P218 1284 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 NOD1Q9Y239 953 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 PCDHA1Q9Y5I3 950 aa14.25□□□□□ -0.13
SPG11-219ENST00000559822 LAMA2P24043 3122 aaKnown RBP14.24□□□□□ -0.13
SPG11-219ENST00000559822 E7EWF7 191 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 PITPNM1O00562 1244 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 ARIH2O95376 493 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 EIF2AK2P19525 551 aaKnown RBP14.24□□□□□ -0.13
SPG11-219ENST00000559822 CASTP20810 708 aaKnown RBP14.24□□□□□ -0.13
SPG11-219ENST00000559822 RFC2P35250 354 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 IRX6P78412 446 aaPredicted RBP14.24□□□□□ -0.13
SPG11-219ENST00000559822 PTH1RQ03431 593 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 GRM4Q14833 912 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 CATIPQ7Z7H3 387 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 CCDC155Q8N6L0 562 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 RETREG2Q8NC44 543 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 PBX4Q9BYU1 374 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 PXMP2Q9NR77 195 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 MRVI1Q9Y6F6 885 aa14.24□□□□□ -0.13
SPG11-219ENST00000559822 NR3C2P08235 984 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 MMP3P08254 477 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 CYP2C9P11712 490 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 ACTN1P12814 892 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 BFSP2Q13515 415 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 DGKDQ16760 1214 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 LY6KQ17RY6 165 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 TMEM67Q5HYA8 995 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 KCNV1Q6PIU1 500 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 OTOP2Q7RTS6 562 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 HOMER1Q86YM7 354 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 AFG1LQ8WV93 481 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 EMID1Q96A84 441 aaPredicted RBP14.23□□□□□ -0.13
SPG11-219ENST00000559822 GAS2L1Q99501 681 aaPredicted RBP14.23□□□□□ -0.13
SPG11-219ENST00000559822 KATNAL1Q9BW62 490 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 RIOX1Q9H6W3 641 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 SLC4A7Q9Y6M7 1214 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 KIAA1217Q5T5P2 1943 aa14.23□□□□□ -0.13
SPG11-219ENST00000559822 ZBBXA8MT70 800 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 GCOM1H8Y6P7 765 aaPredicted RBP14.22□□□□□ -0.13
SPG11-219ENST00000559822 POLR2MP0CAP2 368 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 ARHGAP1Q07960 439 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms