RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 RGS22Q8NE09 1264 aa22.01■■□□□ 1.11
CDC42BPB-206ENST00000559790 DNERQ8NFT8 737 aa22.01■■□□□ 1.11
CDC42BPB-206ENST00000559790 HERVK_113Q902F9 699 aa22.01■■□□□ 1.11
CDC42BPB-206ENST00000559790 TRMT13Q9NUP7 481 aaKnown RBP22.01■■□□□ 1.11
CDC42BPB-206ENST00000559790 RBAK-RBAKDNI3L0D1 243 aa22■■□□□ 1.11
CDC42BPB-206ENST00000559790 PPP1R11O60927 126 aaPredicted RBP22■■□□□ 1.11
CDC42BPB-206ENST00000559790 NT5C2P49902 561 aa22■■□□□ 1.11
CDC42BPB-206ENST00000559790 PSRC1Q6PGN9 363 aaPredicted RBP22■■□□□ 1.11
CDC42BPB-206ENST00000559790 STAG2Q8N3U4 1231 aa22■■□□□ 1.11
CDC42BPB-206ENST00000559790 SYTL5Q8TDW5 730 aaPredicted RBP22■■□□□ 1.11
CDC42BPB-206ENST00000559790 CTAGE1Q96RT6 745 aa22■■□□□ 1.11
CDC42BPB-206ENST00000559790 JMJD4Q9H9V9 463 aa22■■□□□ 1.11
CDC42BPB-206ENST00000559790 PNMA2Q9UL42 364 aa22■■□□□ 1.11
CDC42BPB-206ENST00000559790 A6NJR5 290 aa21.99■■□□□ 1.11
CDC42BPB-206ENST00000559790 HIP1O00291 1037 aa21.99■■□□□ 1.11
CDC42BPB-206ENST00000559790 CCL23P55773 120 aa21.99■■□□□ 1.11
CDC42BPB-206ENST00000559790 ASPRV1Q53RT3 343 aa21.99■■□□□ 1.11
CDC42BPB-206ENST00000559790 IQCA1Q86XH1 822 aa21.99■■□□□ 1.11
CDC42BPB-206ENST00000559790 OR6J1Q8NGC5 347 aa21.99■■□□□ 1.11
CDC42BPB-206ENST00000559790 TIFAQ96CG3 184 aa21.99■■□□□ 1.11
CDC42BPB-206ENST00000559790 MTMR8Q96EF0 704 aa21.99■■□□□ 1.11
CDC42BPB-206ENST00000559790 MUC3AQ02505 3323 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 CYP2C9P11712 490 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 GHRHRQ02643 423 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 PDE4DQ08499 809 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 PPP2R5BQ15173 497 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 SCFD2Q8WU76 684 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 SCLYQ96I15 445 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 TAAR1Q96RJ0 339 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 ZNF576Q9H609 170 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 KAT14Q9H8E8 782 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 SENP2Q9HC62 589 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 YBX2Q9Y2T7 364 aaKnown RBP21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 ABCB11O95342 1321 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 NCOR1O75376 2440 aa21.98■■□□□ 1.11
CDC42BPB-206ENST00000559790 MICAL3Q7RTP6 2002 aa21.97■■□□□ 1.11
CDC42BPB-206ENST00000559790 ZEB2O60315 1214 aa21.97■■□□□ 1.11
CDC42BPB-206ENST00000559790 FOSL2P15408 326 aa21.97■■□□□ 1.11
CDC42BPB-206ENST00000559790 PTH1RQ03431 593 aa21.97■■□□□ 1.11
CDC42BPB-206ENST00000559790 IMMTQ16891 758 aaKnown RBP21.97■■□□□ 1.11
CDC42BPB-206ENST00000559790 SEZ6LQ9BYH1 1024 aa21.97■■□□□ 1.11
CDC42BPB-206ENST00000559790 POLR3EQ9NVU0 708 aa21.97■■□□□ 1.11
CDC42BPB-206ENST00000559790 RAD50Q92878 1312 aa21.97■■□□□ 1.11
CDC42BPB-206ENST00000559790 SIP14410 1827 aa21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 PRRC2BQ5JSZ5 2229 aaKnown RBP21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 MYL3P08590 195 aa21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 CPT1AP50416 773 aa21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 ARHGAP1Q07960 439 aa21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 NBPF20Q3BBV1 942 aa21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 CCDC178Q5BJE1 867 aa21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 STOX1Q6ZVD7 989 aa21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 MTG1Q9BT17 334 aaPredicted RBP21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 MAD2L2Q9UI95 211 aa21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 SUPT16HQ9Y5B9 1047 aaKnown RBP21.96■■□□□ 1.11
CDC42BPB-206ENST00000559790 NKRFO15226 690 aaKnown RBP eCLIP21.95■■□□□ 1.1
CDC42BPB-206ENST00000559790 CYP21A2P08686 494 aa21.95■■□□□ 1.1
CDC42BPB-206ENST00000559790 MAF1Q9H063 256 aa21.95■■□□□ 1.1
CDC42BPB-206ENST00000559790 RGS20O76081 388 aa21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 PARP1P09874 1014 aaKnown RBP21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 TXNP10599 105 aaKnown RBP21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 CHMLP26374 656 aa21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 HSD17B4P51659 736 aa21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 COL9A3Q14050 684 aaPredicted RBP21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 ADGRE1Q14246 886 aa21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 OTOP2Q7RTS6 562 aa21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 KAT2BQ92831 832 aa21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 KRT23Q9C075 422 aa21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 CTNNA3Q9UI47 895 aa21.94■■□□□ 1.1
CDC42BPB-206ENST00000559790 PALM3A6NDB9 673 aaPredicted RBP21.93■■□□□ 1.1
CDC42BPB-206ENST00000559790 MMP3P08254 477 aa21.93■■□□□ 1.1
CDC42BPB-206ENST00000559790 TTLL4Q14679 1199 aa21.93■■□□□ 1.1
CDC42BPB-206ENST00000559790 FBXO11Q86XK2 927 aa21.93■■□□□ 1.1
CDC42BPB-206ENST00000559790 CNNM2Q9H8M5 875 aa21.93■■□□□ 1.1
CDC42BPB-206ENST00000559790 BRWD1Q9NSI6 2320 aa21.93■■□□□ 1.1
CDC42BPB-206ENST00000559790 CYTH3O43739 400 aa21.92■■□□□ 1.1
CDC42BPB-206ENST00000559790 FGBP02675 491 aa21.92■■□□□ 1.1
CDC42BPB-206ENST00000559790 ANTXR2P58335 489 aa21.92■■□□□ 1.1
CDC42BPB-206ENST00000559790 LY6KQ17RY6 165 aa21.92■■□□□ 1.1
CDC42BPB-206ENST00000559790 NFRKBQ6P4R8 1299 aa21.92■■□□□ 1.1
CDC42BPB-206ENST00000559790 IL31RAQ8NI17 732 aa21.92■■□□□ 1.1
CDC42BPB-206ENST00000559790 AFG1LQ8WV93 481 aa21.92■■□□□ 1.1
CDC42BPB-206ENST00000559790 PXMP2Q9NR77 195 aa21.92■■□□□ 1.1
CDC42BPB-206ENST00000559790 ATG2AQ2TAZ0 1938 aa21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 RABGGTBP53611 331 aa21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 GRM4Q14833 912 aa21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 GPNMBQ14956 572 aa21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 IFIT1BQ5T764 474 aaKnown RBP21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 NSUN6Q8TEA1 469 aaKnown RBP21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 DHX38Q92620 1227 aaKnown RBP21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 RMDN3Q96TC7 470 aa21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 UBAC1Q9BSL1 405 aa21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 NKX2-4Q9H2Z4 354 aa21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 PRDM12Q9H4Q4 367 aa21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 PRDM6Q9NQX0 595 aa21.91■■□□□ 1.1
CDC42BPB-206ENST00000559790 KLRF2D3W0D1 207 aa21.9■■□□□ 1.1
CDC42BPB-206ENST00000559790 MYOGP15173 224 aa21.9■■□□□ 1.1
CDC42BPB-206ENST00000559790 EIF2AK2P19525 551 aaKnown RBP21.9■■□□□ 1.1
CDC42BPB-206ENST00000559790 IRX6P78412 446 aaPredicted RBP21.9■■□□□ 1.1
CDC42BPB-206ENST00000559790 SEPT14Q6ZU15 432 aa21.9■■□□□ 1.1
CDC42BPB-206ENST00000559790 VAT1LQ9HCJ6 419 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms