RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TRMT13Q9NUP7 481 aaKnown RBP15.38■□□□□ 0.05
TPM1-220ENST00000559556 A6NJR5 290 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 MYL3P08590 195 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 NT5C2P49902 561 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 ADGRE1Q14246 886 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 NFRKBQ6P4R8 1299 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 MAF1Q9H063 256 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 SLC28A3Q9HAS3 691 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 PRDM6Q9NQX0 595 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 THEGQ9P2T0 379 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 PCDHA11Q9Y5I1 949 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 SLC4A7Q9Y6M7 1214 aa15.37■□□□□ 0.05
TPM1-220ENST00000559556 TRIOO75962 3097 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 TRIM6-TRIM34B2RNG4 842 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 B4DLN1 442 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 PITPNM1O00562 1244 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 KPNA6O60684 536 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 CYP2C9P11712 490 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 MRPL12P52815 198 aaKnown RBP15.36■□□□□ 0.05
TPM1-220ENST00000559556 AAMPQ13685 434 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 NBPF20Q3BBV1 942 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 BRDTQ58F21 947 aaPredicted RBP15.36■□□□□ 0.05
TPM1-220ENST00000559556 SMC5Q8IY18 1101 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 RGS22Q8NE09 1264 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 ATXN2LQ8WWM7 1075 aaKnown RBP15.36■□□□□ 0.05
TPM1-220ENST00000559556 ESR2Q92731 530 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 GPHNQ9NQX3 736 aaPredicted RBP15.36■□□□□ 0.05
TPM1-220ENST00000559556 C5orf42Q9H799 3197 aa15.36■□□□□ 0.05
TPM1-220ENST00000559556 RFC2P35250 354 aa15.35■□□□□ 0.05
TPM1-220ENST00000559556 PTPN11Q06124 597 aaPredicted RBP15.35■□□□□ 0.05
TPM1-220ENST00000559556 TTLL4Q14679 1199 aa15.35■□□□□ 0.05
TPM1-220ENST00000559556 USH1GQ495M9 461 aa15.35■□□□□ 0.05
TPM1-220ENST00000559556 PPP2R2DQ66LE6 453 aa15.35■□□□□ 0.05
TPM1-220ENST00000559556 DGKHQ86XP1 1220 aa15.35■□□□□ 0.05
TPM1-220ENST00000559556 PNMA1Q8ND90 353 aa15.35■□□□□ 0.05
TPM1-220ENST00000559556 RILPL2Q969X0 211 aa15.35■□□□□ 0.05
TPM1-220ENST00000559556 OSBPL3Q9H4L5 887 aa15.35■□□□□ 0.05
TPM1-220ENST00000559556 ZBBXA8MT70 800 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 ARIH2O95376 493 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 TXNP10599 105 aaKnown RBP15.34■□□□□ 0.05
TPM1-220ENST00000559556 ATP2A2P16615 1042 aaKnown RBP15.34■□□□□ 0.05
TPM1-220ENST00000559556 SDSP20132 328 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 RABGGTBP53611 331 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 FAM47CQ5HY64 1035 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 IQCA1Q86XH1 822 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 PPM1EQ8WY54 764 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 COPS5Q92905 334 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 ZKSCAN3Q9BRR0 538 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 CPVLQ9H3G5 476 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 ABCB11O95342 1321 aa15.34■□□□□ 0.05
TPM1-220ENST00000559556 MYH9P35579 1960 aaKnown RBP15.33■□□□□ 0.05
TPM1-220ENST00000559556 ZNF213O14771 459 aa15.33■□□□□ 0.04
TPM1-220ENST00000559556 GOLGA8HP0CJ92 632 aa15.33■□□□□ 0.04
TPM1-220ENST00000559556 CDC37Q16543 378 aaPredicted RBP15.33■□□□□ 0.04
TPM1-220ENST00000559556 ASPRV1Q53RT3 343 aa15.33■□□□□ 0.04
TPM1-220ENST00000559556 CCDC178Q5BJE1 867 aa15.33■□□□□ 0.04
TPM1-220ENST00000559556 CCDC62Q6P9F0 684 aa15.33■□□□□ 0.04
TPM1-220ENST00000559556 DEFB128Q7Z7B8 93 aa15.33■□□□□ 0.04
TPM1-220ENST00000559556 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.04
TPM1-220ENST00000559556 ANKS1AQ92625 1134 aa15.33■□□□□ 0.04
TPM1-220ENST00000559556 KIAA1671Q9BY89 1806 aa15.33■□□□□ 0.04
TPM1-220ENST00000559556 TNFRSF10AO00220 468 aa15.32■□□□□ 0.04
TPM1-220ENST00000559556 KDM4AO75164 1064 aa15.32■□□□□ 0.04
TPM1-220ENST00000559556 ACTN1P12814 892 aa15.32■□□□□ 0.04
TPM1-220ENST00000559556 MYOGP15173 224 aa15.32■□□□□ 0.04
TPM1-220ENST00000559556 IGFBP4P22692 258 aa15.32■□□□□ 0.04
TPM1-220ENST00000559556 ADGRF4Q8IZF3 695 aa15.32■□□□□ 0.04
TPM1-220ENST00000559556 ENAHQ8N8S7 591 aaPredicted RBP15.32■□□□□ 0.04
TPM1-220ENST00000559556 ASB2Q96Q27 587 aa15.32■□□□□ 0.04
TPM1-220ENST00000559556 SLC9A7Q96T83 725 aa15.32■□□□□ 0.04
TPM1-220ENST00000559556 UBA5Q9GZZ9 404 aa15.32■□□□□ 0.04
TPM1-220ENST00000559556 EVPLQ92817 2033 aa15.32■□□□□ 0.04
TPM1-220ENST00000559556 B4E1Z4 1266 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 MMP3P08254 477 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 IQCF3P0C7M6 154 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 MRPS5P82675 430 aaKnown RBP15.31■□□□□ 0.04
TPM1-220ENST00000559556 ARHGAP1Q07960 439 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 BFSP2Q13515 415 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 CCDC85BQ15834 202 aaPredicted RBP15.31■□□□□ 0.04
TPM1-220ENST00000559556 SESTD1Q86VW0 696 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 CHD1LQ86WJ1 897 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 SYTL5Q8TDW5 730 aaPredicted RBP15.31■□□□□ 0.04
TPM1-220ENST00000559556 PPP1R13LQ8WUF5 828 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 TBC1D5Q92609 795 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 DSCC1Q9BVC3 393 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 KAT14Q9H8E8 782 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 COL20A1Q9P218 1284 aa15.31■□□□□ 0.04
TPM1-220ENST00000559556 HIP1O00291 1037 aa15.3■□□□□ 0.04
TPM1-220ENST00000559556 GH1P01241 217 aa15.3■□□□□ 0.04
TPM1-220ENST00000559556 CA3P07451 260 aa15.3■□□□□ 0.04
TPM1-220ENST00000559556 POU3F3P20264 500 aaPredicted RBP15.3■□□□□ 0.04
TPM1-220ENST00000559556 NUCB1Q02818 461 aa15.3■□□□□ 0.04
TPM1-220ENST00000559556 QRICH1Q2TAL8 776 aa15.3■□□□□ 0.04
TPM1-220ENST00000559556 TMEM67Q5HYA8 995 aa15.3■□□□□ 0.04
TPM1-220ENST00000559556 B4GALNT3Q6L9W6 998 aa15.3■□□□□ 0.04
TPM1-220ENST00000559556 CWC27Q6UX04 472 aaKnown RBP15.3■□□□□ 0.04
TPM1-220ENST00000559556 CAGE1Q8TC20 777 aa15.3■□□□□ 0.04
TPM1-220ENST00000559556 PHOSPHO2Q8TCD6 241 aa15.3■□□□□ 0.04
TPM1-220ENST00000559556 NSUN6Q8TEA1 469 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms