RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 DHTKD1Q96HY7 919 aaPredicted RBP12.38□□□□□ -0.43
SPG11-217ENST00000559511 ABHD10Q9NUJ1 306 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 CGNQ9P2M7 1197 aaKnown RBP12.38□□□□□ -0.43
SPG11-217ENST00000559511 LGALS16A8MUM7 142 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 RAD21O60216 631 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 URI1O94763 535 aaPredicted RBP12.38□□□□□ -0.43
SPG11-217ENST00000559511 EEF1GP26641 437 aaKnown RBP12.38□□□□□ -0.43
SPG11-217ENST00000559511 ERVK-24P63145 666 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 MCM6Q14566 821 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 SEPT2Q15019 361 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 TMEM266Q2M3C6 531 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 ERCC6LQ2NKX8 1250 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 PPP4R3AQ6IN85 833 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 ZNF507Q8TCN5 953 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 HAS1Q92839 578 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 P2RX5Q93086 422 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 KIFC2Q96AC6 838 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 NUP88Q99567 741 aaPredicted RBP12.38□□□□□ -0.43
SPG11-217ENST00000559511 TRIM34Q9BYJ4 488 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
SPG11-217ENST00000559511 VPS33BQ9H267 617 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 PSTPIP2Q9H939 334 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 KANSL2Q9H9L4 492 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 NYAP2Q9P242 653 aa12.38□□□□□ -0.43
SPG11-217ENST00000559511 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
SPG11-217ENST00000559511 MYMKA6NI61 221 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 TPM1P09493 284 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 CCNE1P24864 410 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 MRPL12P52815 198 aaKnown RBP12.37□□□□□ -0.43
SPG11-217ENST00000559511 AMPD3Q01432 767 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 QRICH1Q2TAL8 776 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 ANKRD40Q6AI12 368 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 SV2BQ7L1I2 683 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 CSGALNACT2Q8N6G5 542 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 MB21D1Q8N884 522 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 LZTFL1Q9NQ48 299 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 PIM2Q9P1W9 311 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 STK17AQ9UEE5 414 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
SPG11-217ENST00000559511 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
SPG11-217ENST00000559511 USP17L15C9J2P7 530 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 USP17L13C9JLJ4 530 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 USP17L11C9JVI0 530 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 USP17L18D6R9N7 530 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 USP17L22D6RA61 530 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 USP17L17D6RBQ6 530 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 USP17L19D6RCP7 530 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 USP17L20D6RJB6 530 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 GDF11O95390 407 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 CASQ1P31415 396 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 SLC1A4P43007 532 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 TGFB2P61812 414 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 JAG1P78504 1218 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 USP17L24Q0WX57 530 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 TRIM14Q14142 442 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 PDIA5Q14554 519 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 RRP1BQ14684 758 aaKnown RBP12.37□□□□□ -0.43
SPG11-217ENST00000559511 ABCB5Q2M3G0 1257 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 SLFN13Q68D06 897 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 USP17L6PQ6QN14 398 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 TMEM179Q6ZVK1 233 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 KCNK18Q7Z418 384 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 DCAF4Q8WV16 495 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 LARP4BQ92615 738 aaKnown RBP12.37□□□□□ -0.43
SPG11-217ENST00000559511 CCDC47Q96A33 483 aaKnown RBP12.37□□□□□ -0.43
SPG11-217ENST00000559511 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 ZNRF3Q9ULT6 936 aa12.37□□□□□ -0.43
SPG11-217ENST00000559511 SMCHD1A6NHR9 2005 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 ATAD5Q96QE3 1844 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 CLRN2A0PK11 232 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 TCP10L2B9ZVM9 353 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 KRT9P35527 623 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 DLGAP5Q15398 846 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 CDC37Q16543 378 aaPredicted RBP12.36□□□□□ -0.43
SPG11-217ENST00000559511 ECM1Q16610 540 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 CNNM4Q6P4Q7 775 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 FBXO38Q6PIJ6 1188 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 NIM1KQ8IY84 436 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 ACRBPQ8NEB7 543 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 SNX29Q8TEQ0 813 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 NOC3LQ8WTT2 800 aaKnown RBP12.36□□□□□ -0.43
SPG11-217ENST00000559511 RAD54LQ92698 747 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 CDK5RAP3Q96JB5 506 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 RAB34Q9BZG1 259 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 SEMA6BQ9H3T3 888 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 SLC39A2Q9NP94 309 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 MAGEC2Q9UBF1 373 aaPredicted RBP12.36□□□□□ -0.43
SPG11-217ENST00000559511 ZNF70Q9UC06 446 aaPredicted RBP12.36□□□□□ -0.43
SPG11-217ENST00000559511 HDAC9Q9UKV0 1011 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 CNTNAP1P78357 1384 aa12.36□□□□□ -0.43
SPG11-217ENST00000559511 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 BICDL2A1A5D9 508 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 B4DLN1 442 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 PES1O00541 588 aaKnown RBP12.35□□□□□ -0.43
SPG11-217ENST00000559511 NKRFO15226 690 aaKnown RBP eCLIP12.35□□□□□ -0.43
SPG11-217ENST00000559511 ICA1Q05084 483 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 TMEM119Q4V9L6 283 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 COBLL1Q53SF7 1204 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 DYMQ7RTS9 669 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms