RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 GULP1Q9UBP9 304 aa4.34□□□□□ -1.71
HERC1-203ENST00000558532 PLA2G2DQ9UNK4 145 aa4.34□□□□□ -1.71
HERC1-203ENST00000558532 WASHC2AQ641Q2 1341 aa4.34□□□□□ -1.71
HERC1-203ENST00000558532 CCNB3Q8WWL7 1395 aa4.34□□□□□ -1.71
HERC1-203ENST00000558532 NCOA2Q15596 1464 aa4.34□□□□□ -1.71
HERC1-203ENST00000558532 ABCA5Q8WWZ7 1642 aa4.34□□□□□ -1.71
HERC1-203ENST00000558532 ADAMTS20P59510 1910 aa4.34□□□□□ -1.71
HERC1-203ENST00000558532 POLR1AO95602 1720 aaPredicted RBP4.33□□□□□ -1.72
HERC1-203ENST00000558532 TIAM1Q13009 1591 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 KDM5BQ9UGL1 1544 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 DBX1A6NMT0 343 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 NFIBO00712 420 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 ABLIM1O14639 778 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 CYBBP04839 570 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 TMEM253P0C7T8 217 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 FBLN1P23142 703 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 GTF2F1P35269 517 aaKnown RBP eCLIP4.33□□□□□ -1.72
HERC1-203ENST00000558532 MAPKAPK2P49137 400 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 CDR1P51861 262 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 EPHB3P54753 998 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 RBL2Q08999 1139 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 NR1I3Q14994 352 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 TESK1Q15569 626 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 SLC35F1Q5T1Q4 408 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 ACBD5Q5T8D3 534 aaPredicted RBP4.33□□□□□ -1.72
HERC1-203ENST00000558532 E4F1Q66K89 784 aaPredicted RBP4.33□□□□□ -1.72
HERC1-203ENST00000558532 BICRALQ6AI39 1079 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 PAQR3Q6TCH7 311 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 C1QL4Q86Z23 238 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 TMEM145Q8NBT3 493 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 KCNN1Q92952 543 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 SGSM3Q96HU1 749 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 ARHGEF4Q9NR80 690 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 FBXL7Q9UJT9 491 aa4.33□□□□□ -1.72
HERC1-203ENST00000558532 CDK11AQ9UQ88 783 aaPredicted RBP4.33□□□□□ -1.72
HERC1-203ENST00000558532 ARID1BQ8NFD5 2236 aaPredicted RBP4.33□□□□□ -1.72
HERC1-203ENST00000558532 FHAD1B1AJZ9 1412 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 RAB3GAP2Q9H2M9 1393 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.32□□□□□ -1.72
HERC1-203ENST00000558532 WASHC2CQ9Y4E1 1318 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 TCAF2A6NFQ2 919 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 AGRPO00253 132 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 PDPK1O15530 556 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 MEFVO15553 781 aaPredicted RBP4.32□□□□□ -1.72
HERC1-203ENST00000558532 DLX3O60479 287 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 NPHS1O60500 1241 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 CPP00450 1065 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 LCP1P13796 627 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 LINC00310P59036 64 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 TMEM62Q0P6H9 643 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 RASGRF1Q13972 1273 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 RASA3Q14644 834 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 KCNA10Q16322 511 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 TMEM132EQ6IEE7 984 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 SPATC1Q76KD6 591 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 NLRP10Q86W26 655 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 PPIL6Q8IXY8 311 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 Q8N1Y9 231 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 LZTR1Q8N653 840 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 PLEKHO2Q8TD55 490 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 CCDC140Q96MF4 163 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 IER2Q9BTL4 223 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 RXFP1Q9HBX9 757 aa4.32□□□□□ -1.72
HERC1-203ENST00000558532 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.32□□□□□ -1.72
HERC1-203ENST00000558532 SMG5Q9UPR3 1016 aaKnown RBP4.32□□□□□ -1.72
HERC1-203ENST00000558532 NOP58Q9Y2X3 529 aaKnown RBP4.32□□□□□ -1.72
HERC1-203ENST00000558532 SETD5Q9C0A6 1442 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 IRS2Q9Y4H2 1338 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 ZC3H12DA2A288 527 aaKnown RBP4.31□□□□□ -1.72
HERC1-203ENST00000558532 NPIPB6E9PJ23 425 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 IRS4O14654 1257 aaPredicted RBP4.31□□□□□ -1.72
HERC1-203ENST00000558532 N4BP3O15049 544 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 ADCY3O60266 1144 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 FPR2P25090 351 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 CFPP27918 469 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 KCNJ6P48051 423 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 ZNF200P98182 395 aaPredicted RBP4.31□□□□□ -1.72
HERC1-203ENST00000558532 MAP4K2Q12851 820 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 KCNAB2Q13303 367 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 SSPNQ14714 243 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 SF3A1Q15459 793 aaKnown RBP4.31□□□□□ -1.72
HERC1-203ENST00000558532 YOD1Q5VVQ6 348 aaPredicted RBP4.31□□□□□ -1.72
HERC1-203ENST00000558532 OLFML2BQ68BL8 750 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 WWC2Q6AWC2 1192 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 ZC3H14Q6PJT7 736 aaKnown RBP4.31□□□□□ -1.72
HERC1-203ENST00000558532 ANKLE2Q86XL3 938 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 IGDCC3Q8IVU1 814 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 TEX2Q8IWB9 1127 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 NETO2Q8NC67 525 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 RCBTB1Q8NDN9 531 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 DIO2Q92813 273 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 OSBP2Q969R2 916 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 ZNF669Q96BR6 464 aaPredicted RBP4.31□□□□□ -1.72
HERC1-203ENST00000558532 AARSD1Q9BTE6 412 aaKnown RBP4.31□□□□□ -1.72
HERC1-203ENST00000558532 HIRIP3Q9BW71 556 aaPredicted RBP4.31□□□□□ -1.72
HERC1-203ENST00000558532 CCDC113Q9H0I3 377 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 EPB41L4AQ9HCS5 686 aaPredicted RBP4.31□□□□□ -1.72
HERC1-203ENST00000558532 SIRT5Q9NXA8 310 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 MARCH2Q9P0N8 246 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 SIRPGQ9P1W8 387 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms