RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 KRT24Q2M2I5 525 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 SPATA1Q5VX52 437 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 PAPD7Q5XG87 772 aaKnown RBP11.01□□□□□ -0.65
TRPM1-207ENST00000558445 SPIRE2Q8WWL2 714 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 CCDC28BQ9BUN5 200 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 VPS16Q9H269 839 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 CLTCL1P53675 1640 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 ZNF518AQ6AHZ1 1483 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 ASAP2O43150 1006 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 UBOX5O94941 541 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 ITGA7Q13683 1181 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 ZNF394Q53GI3 561 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 TSEN2Q8NCE0 465 aaKnown RBP11.01□□□□□ -0.65
TRPM1-207ENST00000558445 STK32AQ8WU08 396 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 POLR3EQ9NVU0 708 aa11.01□□□□□ -0.65
TRPM1-207ENST00000558445 HSPA9P38646 679 aaKnown RBP11□□□□□ -0.65
TRPM1-207ENST00000558445 DCTN2Q13561 401 aaKnown RBP11□□□□□ -0.65
TRPM1-207ENST00000558445 RRS1Q15050 365 aaKnown RBP11□□□□□ -0.65
TRPM1-207ENST00000558445 TMEM53Q6P2H8 277 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 SPATA17Q96L03 361 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 ANGPTL2Q9UKU9 493 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 USP15Q9Y4E8 981 aaPredicted RBP11□□□□□ -0.65
TRPM1-207ENST00000558445 TRPM1Q7Z4N2 1603 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 ZMYM6O95789 1325 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 TMEM247A6NEH6 219 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 ACTN4O43707 911 aaKnown RBP11□□□□□ -0.65
TRPM1-207ENST00000558445 ATP9AO75110 1047 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 ITGB3BPQ13352 177 aaPredicted RBP11□□□□□ -0.65
TRPM1-207ENST00000558445 CDK5RAP3Q96JB5 506 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 ABHD10Q9NUJ1 306 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 TBC1D7Q9P0N9 293 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 DMGDHQ9UI17 866 aaKnown RBP11□□□□□ -0.65
TRPM1-207ENST00000558445 ARHGAP10A1A4S6 786 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 RAD21O60216 631 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 DKC1O60832 514 aaKnown RBP eCLIP11□□□□□ -0.65
TRPM1-207ENST00000558445 TBCAO75347 108 aaKnown RBP11□□□□□ -0.65
TRPM1-207ENST00000558445 IDO1P14902 403 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 OXCT1P55809 520 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 KCNJ2P63252 427 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 VPS52Q8N1B4 723 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 C1orf131Q8NDD1 294 aaKnown RBP11□□□□□ -0.65
TRPM1-207ENST00000558445 MPP4Q96JB8 637 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 SYT15Q9BQS2 421 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 SYNCQ9H7C4 482 aa11□□□□□ -0.65
TRPM1-207ENST00000558445 F6X3S4 739 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 TBC1D12O60347 775 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 BPIFB4P59827 614 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 KLHL7Q8IXQ5 586 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 RETREG2Q8NC44 543 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 SAMSN1Q9NSI8 373 aaKnown RBP10.99□□□□□ -0.65
TRPM1-207ENST00000558445 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRPM1-207ENST00000558445 SCHIP1Q9P0W5 487 aaPredicted RBP10.99□□□□□ -0.65
TRPM1-207ENST00000558445 GPR75-ASB3A0A0A6YYF3 556 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 NDUFB5O43674 189 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 UBTFL6P0CB48 400 aaPredicted RBP10.99□□□□□ -0.65
TRPM1-207ENST00000558445 ATP5DP30049 168 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 HOXD12P35452 270 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 SERPINB8P50452 374 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 CUL1Q13616 776 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 BHMT2Q9H2M3 363 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 ASB3Q9Y575 518 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 BIRC5O15392 142 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 MGEA5O60502 916 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 CIB2O75838 187 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 NFKBIAP25963 317 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 AMPD2Q01433 879 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 ZCWPW2Q504Y3 356 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 RAB3IL1Q8TBN0 382 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 PTPRN2Q92932 1015 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 NOX5Q96PH1 765 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 DCLRE1BQ9H816 532 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 KCNK9Q9NPC2 374 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 TUBE1Q9UJT0 475 aa10.99□□□□□ -0.65
TRPM1-207ENST00000558445 TMEM110-MUSTN1A8MSY1 372 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 CAPN15O75808 1086 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 CFAP70Q5T0N1 1121 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 KRT12Q99456 494 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 LRRC2Q9BYS8 371 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 NKIRAS1Q9NYS0 192 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 ARL2BPQ9Y2Y0 163 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 ARHGEF11O15085 1522 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 SMARCA1P28370 1054 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 HDAC4P56524 1084 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 DENND2CQ68D51 928 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 RALYLQ86SE5 291 aaKnown RBP10.98□□□□□ -0.65
TRPM1-207ENST00000558445 SCUBE1Q8IWY4 988 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 FAM129AQ9BZQ8 928 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 SNX12Q9UMY4 172 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 CLIC4Q9Y696 253 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 A0A1B0GTH6 734 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 ZNF185O15231 689 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 ABL2P42684 1182 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 NMIQ13287 307 aaPredicted RBP10.98□□□□□ -0.65
TRPM1-207ENST00000558445 NR1I3Q14994 352 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 QPCTQ16769 361 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 RSPH3Q86UC2 560 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 PRPF31Q8WWY3 499 aaKnown RBP10.98□□□□□ -0.65
TRPM1-207ENST00000558445 PASKQ96RG2 1323 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 C5orf60A6NFR6 353 aa10.98□□□□□ -0.65
TRPM1-207ENST00000558445 NUTM2BA6NNL0 878 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms