RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CUL5Q93034 780 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 RMDN3Q96TC7 470 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 MYL10Q9BUA6 226 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 KATNBL1Q9H079 304 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 AP5M1Q9H0R1 490 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 ZSWIM6Q9HCJ5 1215 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 FARP1Q9Y4F1 1045 aaPredicted RBP9.8□□□□□ -0.84
TPM1-213ENST00000558400 KLF18A0A0U1RQI7 1052 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 RBM47A0AV96 593 aaKnown RBP9.79□□□□□ -0.84
TPM1-213ENST00000558400 EIF3JO75822 258 aaKnown RBP9.79□□□□□ -0.84
TPM1-213ENST00000558400 PGK1P00558 417 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 CASTP20810 708 aaKnown RBP9.79□□□□□ -0.84
TPM1-213ENST00000558400 EDNRBP24530 442 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 CST5P28325 142 aaPredicted RBP9.79□□□□□ -0.84
TPM1-213ENST00000558400 DUSP28Q4G0W2 176 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 BRDTQ58F21 947 aaPredicted RBP9.79□□□□□ -0.84
TPM1-213ENST00000558400 GNASQ5JWF2 1037 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 C1orf53Q5VUE5 145 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 TAPT1Q6NXT6 567 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 SLC30A10Q6XR72 485 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 Q6ZUG5 572 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 TMTC3Q6ZXV5 915 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 KLHDC9Q8NEP7 349 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 DIS3LQ8TF46 1054 aaKnown RBP9.79□□□□□ -0.84
TPM1-213ENST00000558400 SCFD2Q8WU76 684 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 TBC1D5Q92609 795 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 TAAR1Q96RJ0 339 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 SEZ6LQ9BYH1 1024 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 AGXT2Q9BYV1 514 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 BRPF3Q9ULD4 1205 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 PHF24Q9UPV7 400 aa9.79□□□□□ -0.84
TPM1-213ENST00000558400 GOLGA8AA7E2F4 631 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 GOLGA8BA8MQT2 603 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 hCG_1984214I3L0E3 225 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 PPP1R11O60927 126 aaPredicted RBP9.78□□□□□ -0.84
TPM1-213ENST00000558400 ADAMTS4O75173 837 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 STAM2O75886 525 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 CABYRO75952 493 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 NR3C2P08235 984 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 C6orf222P0C671 652 aaPredicted RBP9.78□□□□□ -0.84
TPM1-213ENST00000558400 ADCYAP1R1P41586 468 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 EVCP57679 992 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 COL9A3Q14050 684 aaPredicted RBP9.78□□□□□ -0.84
TPM1-213ENST00000558400 TTLL4Q14679 1199 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 KCNA10Q16322 511 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 SLC35G1Q2M3R5 365 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 KCNV1Q6PIU1 500 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 SLC39A5Q6ZMH5 540 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 EEPD1Q7L9B9 569 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 ZNF713Q8N859 430 aaPredicted RBP9.78□□□□□ -0.84
TPM1-213ENST00000558400 BRF1Q92994 677 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 TCEANC2Q96MN5 208 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 GLT1D1Q96MS3 346 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 PURBQ96QR8 312 aaKnown RBP9.78□□□□□ -0.84
TPM1-213ENST00000558400 WDR11Q9BZH6 1224 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 GLT8D2Q9H1C3 349 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 UPF3AQ9H1J1 476 aaKnown RBP9.78□□□□□ -0.84
TPM1-213ENST00000558400 PSTPIP2Q9H939 334 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 PRDM6Q9NQX0 595 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 NAP1L2Q9ULW6 460 aaPredicted RBP9.78□□□□□ -0.84
TPM1-213ENST00000558400 GNEQ9Y223 722 aaKnown RBP9.78□□□□□ -0.84
TPM1-213ENST00000558400 ASTN1O14525 1302 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 ELP1O95163 1332 aa9.78□□□□□ -0.84
TPM1-213ENST00000558400 SMCHD1A6NHR9 2005 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 PIK3CDO00329 1044 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 OPLAHO14841 1288 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 DYNC1LI2O43237 492 aaPredicted RBP9.77□□□□□ -0.85
TPM1-213ENST00000558400 KPNA6O60684 536 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 GABBR2O75899 941 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 PLEKHA8P1O95397 391 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 TGFB3P10600 412 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 SMPD1P17405 629 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 RXRAP19793 462 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 METAP2P50579 478 aaKnown RBP eCLIP9.77□□□□□ -0.85
TPM1-213ENST00000558400 ACLYP53396 1101 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 AKAP17AQ02040 695 aaKnown RBP9.77□□□□□ -0.85
TPM1-213ENST00000558400 CCSAPQ6IQ19 270 aaPredicted RBP9.77□□□□□ -0.85
TPM1-213ENST00000558400 XRRA1Q6P2D8 792 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 Q7L0L9 218 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 VSIG10LQ86VR7 867 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 FBXO16Q8IX29 292 aaPredicted RBP9.77□□□□□ -0.85
TPM1-213ENST00000558400 SMARCC2Q8TAQ2 1214 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 PIBF1Q8WXW3 757 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 VTI1AQ96AJ9 217 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 ZNF274Q96GC6 653 aaPredicted RBP9.77□□□□□ -0.85
TPM1-213ENST00000558400 ALDH8A1Q9H2A2 487 aaPredicted RBP9.77□□□□□ -0.85
TPM1-213ENST00000558400 PXMP2Q9NR77 195 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 PDGFCQ9NRA1 345 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 MTMR10Q9NXD2 777 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 PRKAG2Q9UGJ0 569 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 V9GY48 417 aaPredicted RBP9.77□□□□□ -0.85
TPM1-213ENST00000558400 SYNRGQ9UMZ2 1314 aa9.77□□□□□ -0.85
TPM1-213ENST00000558400 TXNP10599 105 aaKnown RBP9.76□□□□□ -0.85
TPM1-213ENST00000558400 CPA1P15085 419 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 CCND2P30279 289 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 HOXA13P31271 388 aaPredicted RBP9.76□□□□□ -0.85
TPM1-213ENST00000558400 ADD1P35611 737 aaKnown RBP9.76□□□□□ -0.85
TPM1-213ENST00000558400 CPT1AP50416 773 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 APOBRQ0VD83 1088 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms