RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CD320Q9NPF0 282 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 PFDN2Q9UHV9 154 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 TIMM13Q9Y5L4 95 aaPredicted RBP5.22□□□□□ -1.57
SPG11-206ENST00000558093 IRAK3Q9Y616 596 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 TRAV20A0A0B4J274 112 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 N4BP3O15049 544 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 NUAK1O60285 661 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 KRT1P04264 644 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 GLI4P10075 376 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 PFKLP17858 780 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 FPR2P25090 351 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 CDR1P51861 262 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 EPHB3P54753 998 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 PRR5P85299 388 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 CYP4F3Q08477 520 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 SSRP1Q08945 709 aaKnown RBP5.21□□□□□ -1.58
SPG11-206ENST00000558093 MAP4K2Q12851 820 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 RASGRF1Q13972 1273 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 LRRC56Q8IYG6 542 aaPredicted RBP5.21□□□□□ -1.58
SPG11-206ENST00000558093 MZB1Q8WU39 189 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 ALG3Q92685 438 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 IPO9Q96P70 1041 aaKnown RBP5.21□□□□□ -1.58
SPG11-206ENST00000558093 MTA3Q9BTC8 594 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 AP5M1Q9H0R1 490 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 GCM1Q9NP62 436 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 FBLN5Q9UBX5 448 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 TMEFF2Q9UIK5 374 aaPredicted RBP5.21□□□□□ -1.58
SPG11-206ENST00000558093 COA3Q9Y2R0 106 aaPredicted RBP5.21□□□□□ -1.58
SPG11-206ENST00000558093 HCFC2Q9Y5Z7 792 aa5.21□□□□□ -1.58
SPG11-206ENST00000558093 C22orf46C9J442 243 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 PRODHO43272 600 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 NTRK1P04629 796 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 BCL6P41182 706 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 NCKAP1LP55160 1127 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 JAG1P78504 1218 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 ZNF385BQ569K4 471 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 SOGA3Q5TF21 947 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 CEP68Q76N32 757 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 LDHDQ86WU2 507 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 CCDC103Q8IW40 242 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 KREMEN2Q8NCW0 462 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 ZNF669Q96BR6 464 aaPredicted RBP5.2□□□□□ -1.58
SPG11-206ENST00000558093 TRMT2BQ96GJ1 504 aaKnown RBP5.2□□□□□ -1.58
SPG11-206ENST00000558093 TMEM169Q96HH4 297 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 DEPDC7Q96QD5 511 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 DNAJC2Q99543 621 aaKnown RBP5.2□□□□□ -1.58
SPG11-206ENST00000558093 CDC6Q99741 560 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 ARHGEF4Q9NR80 690 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 FAN1Q9Y2M0 1017 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 MSRB2Q9Y3D2 182 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 PCDHA2Q9Y5H9 948 aa5.2□□□□□ -1.58
SPG11-206ENST00000558093 BUB1BO60566 1050 aaPredicted RBP5.19□□□□□ -1.58
SPG11-206ENST00000558093 PPP1R11O60927 126 aaPredicted RBP5.19□□□□□ -1.58
SPG11-206ENST00000558093 PI3P19957 117 aa5.19□□□□□ -1.58
SPG11-206ENST00000558093 TARBP2Q15633 366 aaKnown RBP5.19□□□□□ -1.58
SPG11-206ENST00000558093 SLC35F1Q5T1Q4 408 aa5.19□□□□□ -1.58
SPG11-206ENST00000558093 NSMFQ6X4W1 530 aa5.19□□□□□ -1.58
SPG11-206ENST00000558093 SPATC1Q76KD6 591 aa5.19□□□□□ -1.58
SPG11-206ENST00000558093 RCBTB1Q8NDN9 531 aa5.19□□□□□ -1.58
SPG11-206ENST00000558093 DPF3Q92784 378 aa5.19□□□□□ -1.58
SPG11-206ENST00000558093 SRPK1Q96SB4 655 aaKnown RBP5.19□□□□□ -1.58
SPG11-206ENST00000558093 SPATA9Q9BWV2 254 aa5.19□□□□□ -1.58
SPG11-206ENST00000558093 CCDC113Q9H0I3 377 aa5.19□□□□□ -1.58
SPG11-206ENST00000558093 CLDND1Q9NY35 253 aa5.19□□□□□ -1.58
SPG11-206ENST00000558093 KCTD3Q9Y597 815 aa5.19□□□□□ -1.58
SPG11-206ENST00000558093 DLX3O60479 287 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 ZBTB7AO95365 584 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 FGFR1P11362 822 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 PABPC1P11940 636 aaKnown RBP5.18□□□□□ -1.58
SPG11-206ENST00000558093 LCP1P13796 627 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 CFPP27918 469 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 LSAMPQ13449 338 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 SSPNQ14714 243 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 SLC9A5Q14940 896 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 MROH9Q5TGP6 573 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 PLEKHO2Q8TD55 490 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 TSPAN17Q96FV3 270 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 C1orf159Q96HA4 380 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 PHF20Q9BVI0 1012 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 IRF2BPLQ9H1B7 796 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 BCAS3Q9H6U6 928 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 SNTG2Q9NY99 539 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 SIT1Q9Y3P8 196 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 PCDHA5Q9Y5H7 936 aa5.18□□□□□ -1.58
SPG11-206ENST00000558093 RBL2Q08999 1139 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 FZD5Q13467 585 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 SERINC3Q13530 473 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 RASA3Q14644 834 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 YOD1Q5VVQ6 348 aaPredicted RBP5.17□□□□□ -1.58
SPG11-206ENST00000558093 DENND5AQ6IQ26 1287 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 CNKSR3Q6P9H4 555 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 DPH6Q7L8W6 267 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 NLRP10Q86W26 655 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 IGDCC3Q8IVU1 814 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 DCAF4Q8WV16 495 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 SEC14L1Q92503 715 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 YIPF4Q9BSR8 244 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 RNF38Q9H0F5 515 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms