RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 CTDP1Q9Y5B0 961 aaPredicted RBP8.94□□□□□ -0.98
SPG11-205ENST00000558080 TACC3Q9Y6A5 838 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 TSPY2A6NKD2 308 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 RANBP6O60518 1105 aaKnown RBP8.93□□□□□ -0.98
SPG11-205ENST00000558080 NMT2O60551 498 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 ZBED4O75132 1171 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 IGHA2P01877 340 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 CYBAP13498 195 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 NUCB1Q02818 461 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 KCTD2Q14681 263 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 MCMDC2Q4G0Z9 681 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 ANO1Q5XXA6 986 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 OLFML2BQ68BL8 750 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 SLFN13Q68D06 897 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 SNRNP48Q6IEG0 339 aaKnown RBP8.93□□□□□ -0.98
SPG11-205ENST00000558080 ABRAQ8N0Z2 381 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 PRPF38AQ8NAV1 312 aaKnown RBP8.93□□□□□ -0.98
SPG11-205ENST00000558080 C1QTNF2Q9BXJ5 285 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 RAVER2Q9HCJ3 691 aaKnown RBP8.93□□□□□ -0.98
SPG11-205ENST00000558080 TOMM22Q9NS69 142 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 DDX20Q9UHI6 824 aaKnown RBP8.93□□□□□ -0.98
SPG11-205ENST00000558080 FEM1BQ9UK73 627 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 ZNF214Q9UL59 606 aaPredicted RBP8.93□□□□□ -0.98
SPG11-205ENST00000558080 ZMYND8Q9ULU4 1186 aaPredicted RBP8.93□□□□□ -0.98
SPG11-205ENST00000558080 MTMR7Q9Y216 660 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.93□□□□□ -0.98
SPG11-205ENST00000558080 PFASO15067 1338 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 PLIN4Q96Q06 1357 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 MYO9BQ13459 2157 aa8.93□□□□□ -0.98
SPG11-205ENST00000558080 MYH7BA7E2Y1 1941 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 TRIM66O15016 1216 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 MAN1A2O60476 641 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 FGAP02671 866 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 HSPD1P10809 573 aaKnown RBP8.92□□□□□ -0.98
SPG11-205ENST00000558080 BMP3P12645 472 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 SYN1P17600 705 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 MCCP23508 829 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 HAND2P61296 217 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 IKQ13123 557 aaPredicted RBP8.92□□□□□ -0.98
SPG11-205ENST00000558080 AGERQ15109 404 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 ALX1Q15699 326 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 RRP12Q5JTH9 1297 aaKnown RBP8.92□□□□□ -0.98
SPG11-205ENST00000558080 GJC2Q5T442 439 aaPredicted RBP8.92□□□□□ -0.98
SPG11-205ENST00000558080 ZNF589Q86UQ0 364 aaPredicted RBP8.92□□□□□ -0.98
SPG11-205ENST00000558080 MEIOBQ8N635 442 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 GMCL1P1Q8NEA9 526 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 MAML3Q96JK9 1138 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 TEX13BQ9BXU2 312 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 IL17RBQ9NRM6 502 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 ANAPC4Q9UJX5 808 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 RIPK3Q9Y572 518 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 DNAH12Q6ZR08 3092 aa8.92□□□□□ -0.98
SPG11-205ENST00000558080 RANBP2P49792 3224 aaKnown RBP8.91□□□□□ -0.98
SPG11-205ENST00000558080 CCDC171Q6TFL3 1326 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 TMEM232C9JQI7 657 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 MSCO60682 206 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 COL6A1P12109 1028 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 SDSP20132 328 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 COPB2P35606 906 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 FXR1P51114 621 aaKnown RBP eCLIP8.91□□□□□ -0.98
SPG11-205ENST00000558080 LRRC26Q2I0M4 334 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 TUSC1Q2TAM9 212 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 ZNF792Q3KQV3 632 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 C6orf118Q5T5N4 469 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 CENPQQ7L2Z9 268 aaPredicted RBP8.91□□□□□ -0.98
SPG11-205ENST00000558080 SH3RF1Q7Z6J0 888 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 LINC00528Q8N1L1 170 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 ARMC2Q8NEN0 867 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 DDX11Q96FC9 970 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 SENP6Q9GZR1 1112 aaPredicted RBP8.91□□□□□ -0.98
SPG11-205ENST00000558080 OSBPL3Q9H4L5 887 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 SLC38A10Q9HBR0 1119 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 STX8Q9UNK0 236 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 MAP4K5Q9Y4K4 846 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 LTBP2Q14767 1821 aa8.91□□□□□ -0.98
SPG11-205ENST00000558080 ATP2A1O14983 1001 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 SEPT4O43236 478 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 ORC4O43929 436 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 UPP2O95045 317 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 TAL1P17542 331 aaPredicted RBP8.9□□□□□ -0.98
SPG11-205ENST00000558080 SLC1A4P43007 532 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 SNAP25P60880 206 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 CWC27Q6UX04 472 aaKnown RBP8.9□□□□□ -0.98
SPG11-205ENST00000558080 KCTD1Q719H9 257 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 RASGRP2Q7LDG7 609 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 TICAM2Q86XR7 235 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 ARRDC4Q8NCT1 418 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 CHURC1Q8WUH1 139 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 STAG1Q8WVM7 1258 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 GMCL1Q96IK5 515 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 TINF2Q9BSI4 451 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 HOMER2Q9NSB8 354 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 DIAPH3Q9NSV4 1193 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 SYNPO2Q9UMS6 1093 aa8.9□□□□□ -0.98
SPG11-205ENST00000558080 DIS3Q9Y2L1 958 aaKnown RBP8.9□□□□□ -0.98
SPG11-205ENST00000558080 KBTBD13C9JR72 458 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 DNM1LO00429 736 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 PPFIA3O75145 1194 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 FGRP09769 529 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 BMP2P12643 396 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms