RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 RASGRP4Q8TDF6 673 aa24.36■■□□□ 1.49
CASC4-204ENST00000557945 BRMS1Q9HCU9 246 aa24.36■■□□□ 1.49
CASC4-204ENST00000557945 FLRT1Q9NZU1 646 aa24.36■■□□□ 1.49
CASC4-204ENST00000557945 PCDHA6Q9UN73 950 aa24.36■■□□□ 1.49
CASC4-204ENST00000557945 PCDHA8Q9Y5H6 950 aa24.36■■□□□ 1.49
CASC4-204ENST00000557945 ASTN1O14525 1302 aa24.35■■□□□ 1.49
CASC4-204ENST00000557945 DAGLBQ8NCG7 672 aa24.35■■□□□ 1.49
CASC4-204ENST00000557945 SLAIN1Q8ND83 568 aa24.35■■□□□ 1.49
CASC4-204ENST00000557945 TRIB2Q92519 343 aa24.35■■□□□ 1.49
CASC4-204ENST00000557945 PGBD1Q96JS3 809 aa24.35■■□□□ 1.49
CASC4-204ENST00000557945 MPHOSPH6Q99547 160 aaKnown RBP24.35■■□□□ 1.49
CASC4-204ENST00000557945 PXMP2Q9NR77 195 aa24.35■■□□□ 1.49
CASC4-204ENST00000557945 ASB14A6NK59 587 aa24.34■■□□□ 1.49
CASC4-204ENST00000557945 FOSP01100 380 aaPredicted RBP24.34■■□□□ 1.49
CASC4-204ENST00000557945 MMP1P03956 469 aa24.34■■□□□ 1.49
CASC4-204ENST00000557945 KRT2P35908 639 aa24.34■■□□□ 1.49
CASC4-204ENST00000557945 CLK2P49760 499 aaKnown RBP24.34■■□□□ 1.49
CASC4-204ENST00000557945 AP3B2Q13367 1082 aa24.34■■□□□ 1.49
CASC4-204ENST00000557945 SAFBQ15424 915 aaKnown RBP eCLIP24.34■■□□□ 1.49
CASC4-204ENST00000557945 LARP1BQ659C4 914 aaKnown RBP24.34■■□□□ 1.49
CASC4-204ENST00000557945 OLFML2BQ68BL8 750 aa24.34■■□□□ 1.49
CASC4-204ENST00000557945 FBXO46Q6PJ61 603 aaPredicted RBP24.34■■□□□ 1.49
CASC4-204ENST00000557945 FBXO18Q8NFZ0 1043 aa24.34■■□□□ 1.49
CASC4-204ENST00000557945 PXYLP1Q8TE99 480 aa24.34■■□□□ 1.49
CASC4-204ENST00000557945 EHMT1Q9H9B1 1298 aa24.34■■□□□ 1.49
CASC4-204ENST00000557945 DDX49Q9Y6V7 483 aaKnown RBP24.34■■□□□ 1.49
CASC4-204ENST00000557945 PLXNA1Q9UIW2 1896 aa24.33■■□□□ 1.49
CASC4-204ENST00000557945 B4DLN1 442 aa24.33■■□□□ 1.49
CASC4-204ENST00000557945 H3BQV1 296 aa24.33■■□□□ 1.49
CASC4-204ENST00000557945 GRK4P32298 578 aa24.33■■□□□ 1.49
CASC4-204ENST00000557945 UBXN2AP68543 259 aa24.33■■□□□ 1.49
CASC4-204ENST00000557945 NPY5RQ15761 445 aa24.33■■□□□ 1.49
CASC4-204ENST00000557945 IFFO2Q5TF58 517 aa24.33■■□□□ 1.49
CASC4-204ENST00000557945 MFSD14CQ5VZR4 134 aa24.33■■□□□ 1.49
CASC4-204ENST00000557945 MCTP2Q6DN12 878 aa24.33■■□□□ 1.49
CASC4-204ENST00000557945 TINF2Q9BSI4 451 aa24.33■■□□□ 1.49
CASC4-204ENST00000557945 PDCP20941 246 aa24.32■■□□□ 1.48
CASC4-204ENST00000557945 CYP2C19P33261 490 aa24.32■■□□□ 1.48
CASC4-204ENST00000557945 PDE4DQ08499 809 aa24.32■■□□□ 1.48
CASC4-204ENST00000557945 ARMCX2Q7L311 632 aa24.32■■□□□ 1.48
CASC4-204ENST00000557945 DIS3L2Q8IYB7 885 aaKnown RBP24.32■■□□□ 1.48
CASC4-204ENST00000557945 MSL3Q8N5Y2 521 aaKnown RBP24.32■■□□□ 1.48
CASC4-204ENST00000557945 OXER1Q8TDS5 423 aa24.32■■□□□ 1.48
CASC4-204ENST00000557945 PDCD2LQ9BRP1 358 aa24.32■■□□□ 1.48
CASC4-204ENST00000557945 ANO3Q9BYT9 981 aa24.32■■□□□ 1.48
CASC4-204ENST00000557945 RBM19Q9Y4C8 960 aaKnown RBP24.32■■□□□ 1.48
CASC4-204ENST00000557945 LCTP09848 1927 aa24.32■■□□□ 1.48
CASC4-204ENST00000557945 HMGCRP04035 888 aa24.31■■□□□ 1.48
CASC4-204ENST00000557945 MYCLP12524 364 aaPredicted RBP24.31■■□□□ 1.48
CASC4-204ENST00000557945 SLC9C1Q4G0N8 1177 aa24.31■■□□□ 1.48
CASC4-204ENST00000557945 MAMDC4Q6UXC1 1216 aa24.31■■□□□ 1.48
CASC4-204ENST00000557945 SH3TC2Q8TF17 1288 aa24.31■■□□□ 1.48
CASC4-204ENST00000557945 IWS1Q96ST2 819 aa24.31■■□□□ 1.48
CASC4-204ENST00000557945 RPTORQ8N122 1335 aa24.31■■□□□ 1.48
CASC4-204ENST00000557945 SYNGAP1Q96PV0 1343 aa24.31■■□□□ 1.48
CASC4-204ENST00000557945 LOC102724159A0A0B4J2E5 919 aa24.3■■□□□ 1.48
CASC4-204ENST00000557945 BTBD18B2RXH4 712 aa24.3■■□□□ 1.48
CASC4-204ENST00000557945 NR3C2P08235 984 aa24.3■■□□□ 1.48
CASC4-204ENST00000557945 GNL2Q13823 731 aaKnown RBP24.3■■□□□ 1.48
CASC4-204ENST00000557945 PGM5Q15124 567 aa24.3■■□□□ 1.48
CASC4-204ENST00000557945 PWP2Q15269 919 aaKnown RBP24.3■■□□□ 1.48
CASC4-204ENST00000557945 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.3■■□□□ 1.48
CASC4-204ENST00000557945 M0R2N6 131 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 CCND2P30279 289 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 TRIM32Q13049 653 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 NR5A1Q13285 461 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 EEPD1Q7L9B9 569 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 IL31RAQ8NI17 732 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 DAXXQ9UER7 740 aaPredicted RBP24.29■■□□□ 1.48
CASC4-204ENST00000557945 CNPY2Q9Y2B0 182 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 FRMPD4Q14CM0 1322 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 CCDC194A0A1B0GVG4 234 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 SNAI1O95863 264 aaPredicted RBP24.29■■□□□ 1.48
CASC4-204ENST00000557945 INHAP05111 366 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 EDNRBP24530 442 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 STXBP2Q15833 593 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 PRAMEF19Q5SWL8 479 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 KRT25Q7Z3Z0 450 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 MCOLN1Q9GZU1 580 aa24.29■■□□□ 1.48
CASC4-204ENST00000557945 VPS37CA5D8V6 355 aaPredicted RBP24.28■■□□□ 1.48
CASC4-204ENST00000557945 NONOQ15233 471 aaKnown RBP eCLIP24.28■■□□□ 1.48
CASC4-204ENST00000557945 MCTP1Q6DN14 999 aa24.28■■□□□ 1.48
CASC4-204ENST00000557945 PIK3AP1Q6ZUJ8 805 aa24.28■■□□□ 1.48
CASC4-204ENST00000557945 MORC4Q8TE76 937 aa24.28■■□□□ 1.48
CASC4-204ENST00000557945 ZFP91Q96JP5 570 aaPredicted RBP24.28■■□□□ 1.48
CASC4-204ENST00000557945 ZHX1Q9UKY1 873 aaPredicted RBP24.28■■□□□ 1.48
CASC4-204ENST00000557945 IGHA2P01877 340 aa24.27■■□□□ 1.48
CASC4-204ENST00000557945 PRKAR2AP13861 404 aaKnown RBP24.27■■□□□ 1.48
CASC4-204ENST00000557945 SYT1P21579 422 aa24.27■■□□□ 1.48
CASC4-204ENST00000557945 SREBF1P36956 1147 aa24.27■■□□□ 1.48
CASC4-204ENST00000557945 CACNB2Q08289 660 aaPredicted RBP24.27■■□□□ 1.48
CASC4-204ENST00000557945 PCNX4Q63HM2 1172 aa24.27■■□□□ 1.48
CASC4-204ENST00000557945 VSIG10LQ86VR7 867 aa24.27■■□□□ 1.48
CASC4-204ENST00000557945 FBXO16Q8IX29 292 aaPredicted RBP24.27■■□□□ 1.48
CASC4-204ENST00000557945 ABHD16BQ9H3Z7 469 aa24.27■■□□□ 1.48
CASC4-204ENST00000557945 EIF3JO75822 258 aaKnown RBP24.26■■□□□ 1.47
CASC4-204ENST00000557945 ARHGAP4P98171 946 aa24.26■■□□□ 1.47
CASC4-204ENST00000557945 ACVR2BQ13705 512 aa24.26■■□□□ 1.47
CASC4-204ENST00000557945 XRRA1Q6P2D8 792 aa24.26■■□□□ 1.47
CASC4-204ENST00000557945 TBCKQ8TEA7 893 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms