RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 NSUN6Q8TEA1 469 aaKnown RBP13.02□□□□□ -0.33
APEX1-220ENST00000557592 MPHOSPH6Q99547 160 aaKnown RBP13.02□□□□□ -0.33
APEX1-220ENST00000557592 PXMP2Q9NR77 195 aa13.02□□□□□ -0.33
APEX1-220ENST00000557592 GJB4Q9NTQ9 266 aa13.02□□□□□ -0.33
APEX1-220ENST00000557592 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.33
APEX1-220ENST00000557592 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.02□□□□□ -0.33
APEX1-220ENST00000557592 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.33
APEX1-220ENST00000557592 SYNGAP1Q96PV0 1343 aa13.02□□□□□ -0.33
APEX1-220ENST00000557592 SPDYE3A6NKU9 549 aa13.01□□□□□ -0.33
APEX1-220ENST00000557592 IGHA2P01877 340 aa13.01□□□□□ -0.33
APEX1-220ENST00000557592 UBXN2AP68543 259 aa13.01□□□□□ -0.33
APEX1-220ENST00000557592 CACNB2Q08289 660 aaPredicted RBP13.01□□□□□ -0.33
APEX1-220ENST00000557592 PDE4DQ08499 809 aa13.01□□□□□ -0.33
APEX1-220ENST00000557592 CUL4AQ13619 759 aa13.01□□□□□ -0.33
APEX1-220ENST00000557592 TRIM29Q14134 588 aa13.01□□□□□ -0.33
APEX1-220ENST00000557592 FAM177A1Q8N128 213 aaPredicted RBP13.01□□□□□ -0.33
APEX1-220ENST00000557592 REXO1Q8N1G1 1221 aaKnown RBP13.01□□□□□ -0.33
APEX1-220ENST00000557592 PHF20Q9BVI0 1012 aa13.01□□□□□ -0.33
APEX1-220ENST00000557592 TMEM260Q9NX78 707 aa13.01□□□□□ -0.33
APEX1-220ENST00000557592 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.01□□□□□ -0.33
APEX1-220ENST00000557592 SMC3Q9UQE7 1217 aa13.01□□□□□ -0.33
APEX1-220ENST00000557592 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
APEX1-220ENST00000557592 LRRC37A2A6NM11 1700 aa13□□□□□ -0.33
APEX1-220ENST00000557592 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
APEX1-220ENST00000557592 ADAMTS3O15072 1205 aa13□□□□□ -0.33
APEX1-220ENST00000557592 SNAI1O95863 264 aaPredicted RBP13□□□□□ -0.33
APEX1-220ENST00000557592 FOSP01100 380 aaPredicted RBP13□□□□□ -0.33
APEX1-220ENST00000557592 MYCLP12524 364 aaPredicted RBP13□□□□□ -0.33
APEX1-220ENST00000557592 GJB2P29033 226 aa13□□□□□ -0.33
APEX1-220ENST00000557592 CLK2P49760 499 aaKnown RBP13□□□□□ -0.33
APEX1-220ENST00000557592 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
APEX1-220ENST00000557592 PRAMEF19Q5SWL8 479 aa13□□□□□ -0.33
APEX1-220ENST00000557592 JAKMIP3Q5VZ66 844 aa13□□□□□ -0.33
APEX1-220ENST00000557592 EEPD1Q7L9B9 569 aa13□□□□□ -0.33
APEX1-220ENST00000557592 TEX2Q8IWB9 1127 aa13□□□□□ -0.33
APEX1-220ENST00000557592 TNS4Q8IZW8 715 aa13□□□□□ -0.33
APEX1-220ENST00000557592 ARMC5Q96C12 935 aa13□□□□□ -0.33
APEX1-220ENST00000557592 ZNF333Q96JL9 665 aa13□□□□□ -0.33
APEX1-220ENST00000557592 PGBD1Q96JS3 809 aa13□□□□□ -0.33
APEX1-220ENST00000557592 C8orf76Q96K31 380 aa13□□□□□ -0.33
APEX1-220ENST00000557592 IWS1Q96ST2 819 aa13□□□□□ -0.33
APEX1-220ENST00000557592 EHMT1Q9H9B1 1298 aa13□□□□□ -0.33
APEX1-220ENST00000557592 FOXD4L1Q9NU39 408 aa13□□□□□ -0.33
APEX1-220ENST00000557592 ZHX1Q9UKY1 873 aaPredicted RBP13□□□□□ -0.33
APEX1-220ENST00000557592 PCDHA6Q9UN73 950 aa13□□□□□ -0.33
APEX1-220ENST00000557592 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
APEX1-220ENST00000557592 KIF3AQ9Y496 699 aa13□□□□□ -0.33
APEX1-220ENST00000557592 PCDHA8Q9Y5H6 950 aa13□□□□□ -0.33
APEX1-220ENST00000557592 RPTORQ8N122 1335 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 NR3C2P08235 984 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 CYBAP13498 195 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 EDNRBP24530 442 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 CNGA1P29973 690 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 GUCY1B3Q02153 619 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 AP3B2Q13367 1082 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 ACVR2BQ13705 512 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 PGM5Q15124 567 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 STXBP2Q15833 593 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 MAP3K21Q5TCX8 1036 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 KRT40Q6A162 431 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 MCTP2Q6DN12 878 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 GALNT17Q6IS24 598 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 FBXO16Q8IX29 292 aaPredicted RBP12.99□□□□□ -0.33
APEX1-220ENST00000557592 BLIDQ8IZY5 108 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 TRPV1Q8NER1 839 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 IL31RAQ8NI17 732 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 RASGRP4Q8TDF6 673 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 MORC4Q8TE76 937 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 PDCD2LQ9BRP1 358 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 ANO3Q9BYT9 981 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 UNC93B1Q9H1C4 597 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 ABHD16BQ9H3Z7 469 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 HMX1Q9NP08 348 aaPredicted RBP12.99□□□□□ -0.33
APEX1-220ENST00000557592 NRBP1Q9UHY1 535 aa12.99□□□□□ -0.33
APEX1-220ENST00000557592 FRMPD4Q14CM0 1322 aa12.98□□□□□ -0.33
APEX1-220ENST00000557592 HSP90AA1P07900 732 aaKnown RBP12.98□□□□□ -0.33
APEX1-220ENST00000557592 CCL5P13501 91 aa12.98□□□□□ -0.33
APEX1-220ENST00000557592 CCND2P30279 289 aa12.98□□□□□ -0.33
APEX1-220ENST00000557592 CCND3P30281 292 aaPredicted RBP12.98□□□□□ -0.33
APEX1-220ENST00000557592 MTFR1Q15390 333 aa12.98□□□□□ -0.33
APEX1-220ENST00000557592 NPY5RQ15761 445 aa12.98□□□□□ -0.33
APEX1-220ENST00000557592 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
APEX1-220ENST00000557592 INTS4Q96HW7 963 aaKnown RBP12.98□□□□□ -0.33
APEX1-220ENST00000557592 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
APEX1-220ENST00000557592 BRMS1Q9HCU9 246 aa12.98□□□□□ -0.33
APEX1-220ENST00000557592 VTA1Q9NP79 307 aa12.98□□□□□ -0.33
APEX1-220ENST00000557592 MMP1P03956 469 aa12.97□□□□□ -0.33
APEX1-220ENST00000557592 ZNF865P0CJ78 1059 aaPredicted RBP12.97□□□□□ -0.33
APEX1-220ENST00000557592 KRT2P35908 639 aa12.97□□□□□ -0.33
APEX1-220ENST00000557592 PCNX4Q63HM2 1172 aa12.97□□□□□ -0.33
APEX1-220ENST00000557592 VSIG10LQ86VR7 867 aa12.97□□□□□ -0.33
APEX1-220ENST00000557592 OXER1Q8TDS5 423 aa12.97□□□□□ -0.33
APEX1-220ENST00000557592 ABHD8Q96I13 439 aa12.97□□□□□ -0.33
APEX1-220ENST00000557592 KATNBL1Q9H079 304 aa12.97□□□□□ -0.33
APEX1-220ENST00000557592 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.97□□□□□ -0.33
APEX1-220ENST00000557592 RNF208Q9H0X6 261 aa12.97□□□□□ -0.33
APEX1-220ENST00000557592 MYH7BA7E2Y1 1941 aa12.97□□□□□ -0.33
APEX1-220ENST00000557592 KIAA1217Q5T5P2 1943 aa12.97□□□□□ -0.33
APEX1-220ENST00000557592 KIAA0100Q14667 2235 aaKnown RBP12.96□□□□□ -0.33
APEX1-220ENST00000557592 M0R2N6 131 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms