RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 TMEM39AQ9NV64 488 aa12.38□□□□□ -0.43
PSMC6-215ENST00000557517 PTPDC1A2A3K4 754 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
PSMC6-215ENST00000557517 DYNC1LI2O43237 492 aaPredicted RBP12.37□□□□□ -0.43
PSMC6-215ENST00000557517 PQBP1O60828 265 aaKnown RBP12.37□□□□□ -0.43
PSMC6-215ENST00000557517 HOXB1P14653 301 aaPredicted RBP12.37□□□□□ -0.43
PSMC6-215ENST00000557517 FSCN1Q16658 493 aaKnown RBP12.37□□□□□ -0.43
PSMC6-215ENST00000557517 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 CYB5R4Q7L1T6 521 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 EEPD1Q7L9B9 569 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 MAFAQ8NHW3 353 aaPredicted RBP12.37□□□□□ -0.43
PSMC6-215ENST00000557517 CDX2Q99626 313 aaPredicted RBP12.37□□□□□ -0.43
PSMC6-215ENST00000557517 UBAC1Q9BSL1 405 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 KRTAP3-3Q9BYR6 98 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 KRTAP3-2Q9BYR7 98 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 AP5M1Q9H0R1 490 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 CPVLQ9H3G5 476 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 JMJD4Q9H9V9 463 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 TBX21Q9UL17 535 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 MYH8P13535 1937 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 GRIN2DO15399 1336 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 MROH7Q68CQ1 1323 aa12.37□□□□□ -0.43
PSMC6-215ENST00000557517 CDH23Q9H251 3354 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 BDP1A6H8Y1 2624 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 A0A0U1RQG5 324 aaPredicted RBP12.36□□□□□ -0.43
PSMC6-215ENST00000557517 PALM3A6NDB9 673 aaPredicted RBP12.36□□□□□ -0.43
PSMC6-215ENST00000557517 TIMP1P01033 207 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 CD4P01730 458 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 PARP1P09874 1014 aaKnown RBP12.36□□□□□ -0.43
PSMC6-215ENST00000557517 RAG1P15918 1043 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 CALML3P27482 149 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 BEX3Q00994 111 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 C9orf50Q5SZB4 431 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 IFIT1BQ5T764 474 aaKnown RBP12.36□□□□□ -0.43
PSMC6-215ENST00000557517 CXCL17Q6UXB2 119 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 SLC30A10Q6XR72 485 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
PSMC6-215ENST00000557517 TLK2Q86UE8 772 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 FBXO16Q8IX29 292 aaPredicted RBP12.36□□□□□ -0.43
PSMC6-215ENST00000557517 FAM126BQ8IXS8 530 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 TBC1D5Q92609 795 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 MTMR8Q96EF0 704 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 WDR11Q9BZH6 1224 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 MUC3AQ02505 3323 aa12.36□□□□□ -0.43
PSMC6-215ENST00000557517 COL11A1P12107 1806 aaPredicted RBP12.35□□□□□ -0.43
PSMC6-215ENST00000557517 ZEB2O60315 1214 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 PTGS1P23219 599 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 EPHB4P54760 987 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 GHRHRQ02643 423 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 TRDNQ13061 729 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 CDC37Q16543 378 aaPredicted RBP12.35□□□□□ -0.43
PSMC6-215ENST00000557517 MFSD5Q6N075 450 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 MCF2L2Q86YR7 1114 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 STAG2Q8N3U4 1231 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 SEMA6BQ9H3T3 888 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 MAD2L2Q9UI95 211 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 ABCB11O95342 1321 aa12.35□□□□□ -0.43
PSMC6-215ENST00000557517 B4DLN1 442 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 KLRF2D3W0D1 207 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 E7EWF7 191 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 MRPL12P52815 198 aaKnown RBP12.34□□□□□ -0.43
PSMC6-215ENST00000557517 TROAPQ12815 778 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 ITGA7Q13683 1181 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 QRICH1Q2TAL8 776 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 USH1GQ495M9 461 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 C16orf59Q7L2K0 433 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 FBXO11Q86XK2 927 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 NCOA7Q8NI08 942 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 SYTL5Q8TDW5 730 aaPredicted RBP12.34□□□□□ -0.43
PSMC6-215ENST00000557517 IGDCC4Q8TDY8 1250 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 IWS1Q96ST2 819 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 MPHOSPH6Q99547 160 aaKnown RBP12.34□□□□□ -0.43
PSMC6-215ENST00000557517 VAT1LQ9HCJ6 419 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 MAP3K20Q9NYL2 800 aaKnown RBP12.34□□□□□ -0.43
PSMC6-215ENST00000557517 MRPL11Q9Y3B7 192 aaKnown RBP12.34□□□□□ -0.43
PSMC6-215ENST00000557517 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
PSMC6-215ENST00000557517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
PSMC6-215ENST00000557517 A6NJR5 290 aa12.33□□□□□ -0.44
PSMC6-215ENST00000557517 NKRFO15226 690 aaKnown RBP eCLIP12.33□□□□□ -0.44
PSMC6-215ENST00000557517 SMAD3P84022 425 aaKnown RBP12.33□□□□□ -0.44
PSMC6-215ENST00000557517 FPGSQ05932 587 aa12.33□□□□□ -0.44
PSMC6-215ENST00000557517 PDE4DQ08499 809 aa12.33□□□□□ -0.44
PSMC6-215ENST00000557517 CCDC62Q6P9F0 684 aa12.33□□□□□ -0.44
PSMC6-215ENST00000557517 SAMD3Q8N6K7 520 aa12.33□□□□□ -0.44
PSMC6-215ENST00000557517 NSUN6Q8TEA1 469 aaKnown RBP12.33□□□□□ -0.44
PSMC6-215ENST00000557517 SCFD2Q8WU76 684 aa12.33□□□□□ -0.44
PSMC6-215ENST00000557517 SYMPKQ92797 1274 aaKnown RBP12.33□□□□□ -0.44
PSMC6-215ENST00000557517 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
PSMC6-215ENST00000557517 TAAR1Q96RJ0 339 aa12.33□□□□□ -0.44
PSMC6-215ENST00000557517 AMNQ9BXJ7 453 aa12.33□□□□□ -0.44
PSMC6-215ENST00000557517 TTYH1Q9H313 450 aaPredicted RBP12.33□□□□□ -0.44
PSMC6-215ENST00000557517 RIOX1Q9H6W3 641 aa12.33□□□□□ -0.44
PSMC6-215ENST00000557517 COL20A1Q9P218 1284 aa12.33□□□□□ -0.44
PSMC6-215ENST00000557517 OPLAHO14841 1288 aa12.32□□□□□ -0.44
PSMC6-215ENST00000557517 IFIT3O14879 490 aaKnown RBP12.32□□□□□ -0.44
PSMC6-215ENST00000557517 ZBTB5O15062 677 aa12.32□□□□□ -0.44
PSMC6-215ENST00000557517 TLR3O15455 904 aaKnown RBP12.32□□□□□ -0.44
PSMC6-215ENST00000557517 KPNA6O60684 536 aa12.32□□□□□ -0.44
PSMC6-215ENST00000557517 PPP1R11O60927 126 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms