RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 FDPSP14324 419 aaKnown RBP17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 EIF2AK2P19525 551 aaKnown RBP17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 EDNRBP24530 442 aa17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 MCM2P49736 904 aa17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 PWP2Q15269 919 aaKnown RBP17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 TMX3Q96JJ7 454 aa17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 KATNBL1Q9H079 304 aa17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 RNF208Q9H0X6 261 aa17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 RIC8AQ9NPQ8 531 aa17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 PXMP2Q9NR77 195 aa17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 ORC3Q9UBD5 711 aaPredicted RBP17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 CNPY2Q9Y2B0 182 aa17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 FRMPD4Q14CM0 1322 aa17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 ZNF865P0CJ78 1059 aaPredicted RBP17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 ARHGEF16Q5VV41 709 aa17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 IL31RAQ8NI17 732 aa17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 NSUN6Q8TEA1 469 aaKnown RBP17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 ZMYND12Q9H0C1 365 aa17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 PAK6Q9NQU5 681 aaPredicted RBP17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 SH3GLB2Q9NR46 395 aa17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 NRBP1Q9UHY1 535 aa17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 ZHX1Q9UKY1 873 aaPredicted RBP17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 MYH7BA7E2Y1 1941 aa17.06■□□□□ 0.32
VIPAS39-210ENST00000557466 CCDC85CA6NKD9 419 aa17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 CNGA1P29973 690 aa17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 MRPL12P52815 198 aaKnown RBP17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 PDE4DQ08499 809 aa17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 ACVR2BQ13705 512 aa17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 PGM5Q15124 567 aa17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 EEPD1Q7L9B9 569 aa17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 FBXO16Q8IX29 292 aaPredicted RBP17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 PDCD2LQ9BRP1 358 aa17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 LLPHQ9BRT6 129 aaKnown RBP17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 ABHD16BQ9H3Z7 469 aa17.05■□□□□ 0.32
VIPAS39-210ENST00000557466 CLK2P49760 499 aaKnown RBP17.04■□□□□ 0.32
VIPAS39-210ENST00000557466 PGBD1Q96JS3 809 aa17.04■□□□□ 0.32
VIPAS39-210ENST00000557466 DEFB118Q96PH6 123 aa17.04■□□□□ 0.32
VIPAS39-210ENST00000557466 IWS1Q96ST2 819 aa17.04■□□□□ 0.32
VIPAS39-210ENST00000557466 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
VIPAS39-210ENST00000557466 ALG1Q9BT22 464 aa17.04■□□□□ 0.32
VIPAS39-210ENST00000557466 TMEM106CQ9BVX2 250 aa17.04■□□□□ 0.32
VIPAS39-210ENST00000557466 C6orf50Q9HD87 102 aa17.04■□□□□ 0.32
VIPAS39-210ENST00000557466 GJB4Q9NTQ9 266 aa17.04■□□□□ 0.32
VIPAS39-210ENST00000557466 TMEM260Q9NX78 707 aa17.04■□□□□ 0.32
VIPAS39-210ENST00000557466 POTEFA5A3E0 1075 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 SPDYE3A6NKU9 549 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 B4DLN1 442 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 SEPT4O43236 478 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 GJB1P08034 283 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 NR3C2P08235 984 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 SOX10P56693 466 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 NLRP5P59047 1200 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 ANO1Q5XXA6 986 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 TEX2Q8IWB9 1127 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 RASGRP4Q8TDF6 673 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 WASF1Q92558 559 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 LENG1Q96BZ8 264 aaPredicted RBP17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 GLT8D2Q9H1C3 349 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 VTA1Q9NP79 307 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 DDX20Q9UHI6 824 aaKnown RBP17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 PCDHA6Q9UN73 950 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 PCDHA8Q9Y5H6 950 aa17.03■□□□□ 0.32
VIPAS39-210ENST00000557466 KIAA0100Q14667 2235 aaKnown RBP17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 ADCY6O43306 1168 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 MYCLP12524 364 aaPredicted RBP17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 AKR1A1P14550 325 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 GNA11P29992 359 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 FOSBP53539 338 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 AP3B2Q13367 1082 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 NPY5RQ15761 445 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 CCDC144BQ3MJ40 725 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 JAKMIP3Q5VZ66 844 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 TAPT1Q6NXT6 567 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 REXO1Q8N1G1 1221 aaKnown RBP17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 U2AF1L4Q8WU68 220 aaKnown RBP17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 ANO3Q9BYT9 981 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 PDGFCQ9NRA1 345 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 KCNJ14Q9UNX9 436 aa17.02■□□□□ 0.32
VIPAS39-210ENST00000557466 DOCK5Q9H7D0 1870 aa17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 CCND2P30279 289 aa17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 ADCYAP1R1P41586 468 aa17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 STXBP2Q15833 593 aa17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 LHX8Q68G74 356 aa17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 FAM177A1Q8N128 213 aaPredicted RBP17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 DAGLBQ8NCG7 672 aa17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 ZFP91Q96JP5 570 aaPredicted RBP17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 PHF20Q9BVI0 1012 aa17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 PCDHA4Q9UN74 947 aa17.01■□□□□ 0.31
VIPAS39-210ENST00000557466 MSCO60682 206 aa17■□□□□ 0.31
VIPAS39-210ENST00000557466 SGPL1O95470 568 aa17■□□□□ 0.31
VIPAS39-210ENST00000557466 FOSP01100 380 aaPredicted RBP17■□□□□ 0.31
VIPAS39-210ENST00000557466 XBP1P17861 261 aa17■□□□□ 0.31
VIPAS39-210ENST00000557466 GJA8P48165 433 aa17■□□□□ 0.31
VIPAS39-210ENST00000557466 MRPS9P82933 396 aaKnown RBP17■□□□□ 0.31
VIPAS39-210ENST00000557466 TMEM63BQ5T3F8 832 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms