RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MMP19Q99542 508 aa7.02□□□□□ -1.29
VRK1-207ENST00000557352 CYP26B1Q9NR63 512 aa7.02□□□□□ -1.29
VRK1-207ENST00000557352 NUDT5Q9UKK9 219 aa7.02□□□□□ -1.29
VRK1-207ENST00000557352 FAN1Q9Y2M0 1017 aa7.02□□□□□ -1.29
VRK1-207ENST00000557352 FUCA1P04066 466 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 SSBP05455 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
VRK1-207ENST00000557352 THBDP07204 575 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 HTRA3P83110 453 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 CYP4F3Q08477 520 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 SLC9A5Q14940 896 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 WWC2Q6AWC2 1192 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 C6orf15Q6UXA7 325 aaPredicted RBP7.01□□□□□ -1.29
VRK1-207ENST00000557352 B3GNT8Q7Z7M8 397 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 CXorf38Q8TB03 319 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 PLEKHO2Q8TD55 490 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 DPF3Q92784 378 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 NKX2-4Q9H2Z4 354 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 ACTR10Q9NZ32 417 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 PMF1-BGLAPU3KQ54 211 aa7.01□□□□□ -1.29
VRK1-207ENST00000557352 ZBTB7AO95365 584 aa7□□□□□ -1.29
VRK1-207ENST00000557352 NTRK1P04629 796 aa7□□□□□ -1.29
VRK1-207ENST00000557352 TNNI3KQ59H18 835 aa7□□□□□ -1.29
VRK1-207ENST00000557352 FAM178BQ8IXR5 827 aa7□□□□□ -1.29
VRK1-207ENST00000557352 SYN1P17600 705 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 SLURP1P55000 103 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 INF2Q27J81 1249 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 LARP1BQ659C4 914 aaKnown RBP6.99□□□□□ -1.29
VRK1-207ENST00000557352 SAPCD2Q86UD0 394 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 ADGRG2Q8IZP9 1017 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 NPLOC4Q8TAT6 608 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 FRS2Q8WU20 508 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 BTN2A2Q8WVV5 523 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 CPA5Q8WXQ8 436 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 MARCH2Q9P0N8 246 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 PRKAG3Q9UGI9 489 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 SIT1Q9Y3P8 196 aa6.99□□□□□ -1.29
VRK1-207ENST00000557352 A0A1B0GTL3 188 aa6.98□□□□□ -1.29
VRK1-207ENST00000557352 B2RBV5 119 aa6.98□□□□□ -1.29
VRK1-207ENST00000557352 TBX1O43435 398 aa6.98□□□□□ -1.29
VRK1-207ENST00000557352 ETFBP38117 255 aa6.98□□□□□ -1.29
VRK1-207ENST00000557352 KCNC1P48547 511 aa6.98□□□□□ -1.29
VRK1-207ENST00000557352 RBM10P98175 930 aaKnown RBP6.98□□□□□ -1.29
VRK1-207ENST00000557352 DLX2Q07687 328 aaPredicted RBP6.98□□□□□ -1.29
VRK1-207ENST00000557352 SKOR2Q2VWA4 1001 aaPredicted RBP6.98□□□□□ -1.29
VRK1-207ENST00000557352 SV2CQ496J9 727 aa6.98□□□□□ -1.29
VRK1-207ENST00000557352 ZNF526Q8TF50 670 aaPredicted RBP6.98□□□□□ -1.29
VRK1-207ENST00000557352 SH3D21A4FU49 640 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 SUSD5O60279 629 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 ITGAVP06756 1048 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 TCF3P15923 654 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 CACNB2Q08289 660 aaPredicted RBP6.97□□□□□ -1.29
VRK1-207ENST00000557352 LIPIQ6XZB0 460 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 ZNF227Q86WZ6 799 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 TEX2Q8IWB9 1127 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 SMARCC2Q8TAQ2 1214 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 MICAL1Q8TDZ2 1067 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.97□□□□□ -1.29
VRK1-207ENST00000557352 ADAM7Q9H2U9 754 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 BTG4Q9NY30 223 aa6.97□□□□□ -1.29
VRK1-207ENST00000557352 ARNTLO00327 626 aa6.96□□□□□ -1.3
VRK1-207ENST00000557352 DDAH1O94760 285 aa6.96□□□□□ -1.3
VRK1-207ENST00000557352 HOXC12P31275 282 aa6.96□□□□□ -1.3
VRK1-207ENST00000557352 KRTAP10-2P60368 255 aa6.96□□□□□ -1.3
VRK1-207ENST00000557352 GNL2Q13823 731 aaKnown RBP6.96□□□□□ -1.3
VRK1-207ENST00000557352 MRM1Q6IN84 353 aaKnown RBP6.96□□□□□ -1.3
VRK1-207ENST00000557352 IQCEQ6IPM2 695 aa6.96□□□□□ -1.3
VRK1-207ENST00000557352 FRMD5Q7Z6J6 570 aa6.96□□□□□ -1.3
VRK1-207ENST00000557352 DCP2Q8IU60 420 aaKnown RBP6.96□□□□□ -1.3
VRK1-207ENST00000557352 CCDC103Q8IW40 242 aa6.96□□□□□ -1.3
VRK1-207ENST00000557352 NOX5Q96PH1 765 aa6.96□□□□□ -1.3
VRK1-207ENST00000557352 LRP2BPQ9P2M1 347 aa6.96□□□□□ -1.3
VRK1-207ENST00000557352 TMEFF2Q9UIK5 374 aaPredicted RBP6.96□□□□□ -1.3
VRK1-207ENST00000557352 C22orf46C9J442 243 aa6.95□□□□□ -1.3
VRK1-207ENST00000557352 SCG5P05408 212 aa6.95□□□□□ -1.3
VRK1-207ENST00000557352 FGRP09769 529 aa6.95□□□□□ -1.3
VRK1-207ENST00000557352 FXNQ16595 210 aa6.95□□□□□ -1.3
VRK1-207ENST00000557352 E4F1Q66K89 784 aaPredicted RBP6.95□□□□□ -1.3
VRK1-207ENST00000557352 TEPSINQ96N21 525 aa6.95□□□□□ -1.3
VRK1-207ENST00000557352 SPATA25Q9BR10 227 aa6.95□□□□□ -1.3
VRK1-207ENST00000557352 CCDC9Q9Y3X0 531 aaKnown RBP6.95□□□□□ -1.3
VRK1-207ENST00000557352 TIMM13Q9Y5L4 95 aaPredicted RBP6.95□□□□□ -1.3
VRK1-207ENST00000557352 SGSM2O43147 1006 aa6.94□□□□□ -1.3
VRK1-207ENST00000557352 SNRPB2P08579 225 aaKnown RBP6.94□□□□□ -1.3
VRK1-207ENST00000557352 ECI1P42126 302 aa6.94□□□□□ -1.3
VRK1-207ENST00000557352 RPL11P62913 178 aaKnown RBP6.94□□□□□ -1.3
VRK1-207ENST00000557352 SF1Q15637 639 aaKnown RBP6.94□□□□□ -1.3
VRK1-207ENST00000557352 KREMEN2Q8NCW0 462 aa6.94□□□□□ -1.3
VRK1-207ENST00000557352 DIO2Q92813 273 aa6.94□□□□□ -1.3
VRK1-207ENST00000557352 ZNF428Q96B54 188 aa6.94□□□□□ -1.3
VRK1-207ENST00000557352 TINF2Q9BSI4 451 aa6.94□□□□□ -1.3
VRK1-207ENST00000557352 AP5M1Q9H0R1 490 aa6.94□□□□□ -1.3
VRK1-207ENST00000557352 ZNF408Q9H9D4 720 aa6.94□□□□□ -1.3
VRK1-207ENST00000557352 JAG2Q9Y219 1238 aa6.94□□□□□ -1.3
VRK1-207ENST00000557352 C8BP07358 591 aa6.93□□□□□ -1.3
VRK1-207ENST00000557352 FPR2P25090 351 aa6.93□□□□□ -1.3
VRK1-207ENST00000557352 ARID5AQ03989 594 aa6.93□□□□□ -1.3
VRK1-207ENST00000557352 CEP68Q76N32 757 aa6.93□□□□□ -1.3
VRK1-207ENST00000557352 CARFQ8N187 725 aa6.93□□□□□ -1.3
VRK1-207ENST00000557352 DDX11Q96FC9 970 aa6.93□□□□□ -1.3
VRK1-207ENST00000557352 CCDC140Q96MF4 163 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms