RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PTCHD1Q96NR3 888 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 FCRL3Q96P31 734 aaPredicted RBP5.79□□□□□ -1.48
CHD8-212ENST00000557329 TRIM55Q9BYV6 548 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 TANGO6Q9C0B7 1094 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 RNF32Q9H0A6 362 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 CYP26B1Q9NR63 512 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 FAM86C1Q9NVL1 165 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 LRP2BPQ9P2M1 347 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 EMC9Q9Y3B6 208 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 ZMYM4Q5VZL5 1548 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 A0A1W2PQJ5 194 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 USP2O75604 605 aaPredicted RBP5.78□□□□□ -1.48
CHD8-212ENST00000557329 PAMP19021 973 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 HOXC12P31275 282 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 L1CAMP32004 1257 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 ERVFC1P60507 584 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 CYP4F8P98187 520 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 PPP2R5DQ14738 602 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 NR1I3Q14994 352 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 HSF5Q4G112 596 aaPredicted RBP5.78□□□□□ -1.48
CHD8-212ENST00000557329 C6orf15Q6UXA7 325 aaPredicted RBP5.78□□□□□ -1.48
CHD8-212ENST00000557329 ANKS3Q6ZW76 656 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 CILP2Q8IUL8 1156 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 ST13P5Q8NFI4 369 aaPredicted RBP5.78□□□□□ -1.48
CHD8-212ENST00000557329 SGSM3Q96HU1 749 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 FGD4Q96M96 766 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 NSUN3Q9H649 340 aaKnown RBP5.78□□□□□ -1.48
CHD8-212ENST00000557329 C19orf44Q9H6X5 657 aa5.78□□□□□ -1.48
CHD8-212ENST00000557329 PPP1R1BQ9UD71 204 aaPredicted RBP5.78□□□□□ -1.48
CHD8-212ENST00000557329 CDK11AQ9UQ88 783 aaPredicted RBP5.78□□□□□ -1.48
CHD8-212ENST00000557329 GPR55Q9Y2T6 319 aaPredicted RBP5.78□□□□□ -1.48
CHD8-212ENST00000557329 PLCH2O75038 1416 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 C2orf71A6NGG8 1288 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.77□□□□□ -1.49
CHD8-212ENST00000557329 SUSD5O60279 629 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 PSPNO60542 156 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 PDE6BP35913 854 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 ERVFRD-1P60508 538 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 SV2CQ496J9 727 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 E4F1Q66K89 784 aaPredicted RBP5.77□□□□□ -1.49
CHD8-212ENST00000557329 CABP7Q86V35 215 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 TRIM59Q8IWR1 403 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 ADCY4Q8NFM4 1077 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 LIN37Q96GY3 246 aaPredicted RBP5.77□□□□□ -1.49
CHD8-212ENST00000557329 ZNF552Q9H707 407 aaPredicted RBP5.77□□□□□ -1.49
CHD8-212ENST00000557329 SUSD2Q9UGT4 822 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 MINPP1Q9UNW1 487 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 SHANK2Q9UPX8 1470 aa5.77□□□□□ -1.49
CHD8-212ENST00000557329 CNTLNQ9NXG0 1405 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 ARHGAP5Q13017 1502 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 NFIBO00712 420 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 TSPAN15O95858 294 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 TMEM253P0C7T8 217 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 GLDCP23378 1020 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 GTF2A2P52657 109 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 RAB33AQ14088 237 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 DDR2Q16832 855 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 DPH6Q7L8W6 267 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 LRP10Q7Z4F1 713 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 PPP1R14AQ96A00 147 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 SHISA4Q96DD7 197 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 MMP19Q99542 508 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 NKX2-4Q9H2Z4 354 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 PDLIM7Q9NR12 457 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 SIRPGQ9P1W8 387 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 EBF1Q9UH73 591 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 SETD1AO15047 1707 aaKnown RBP5.76□□□□□ -1.49
CHD8-212ENST00000557329 NUP153P49790 1475 aaKnown RBP5.76□□□□□ -1.49
CHD8-212ENST00000557329 ZNF518AQ6AHZ1 1483 aa5.76□□□□□ -1.49
CHD8-212ENST00000557329 NPHP3-ACAD11A0A0J9YXS1 232 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 SRGAP3O43295 1099 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 KLF4O43474 513 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 PRKCAP17252 672 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 TRHRP34981 398 aaPredicted RBP5.75□□□□□ -1.49
CHD8-212ENST00000557329 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 TMEM132EQ6IEE7 984 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 PRR23BQ6ZRT6 265 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 LRRC47Q8N1G4 583 aaKnown RBP5.75□□□□□ -1.49
CHD8-212ENST00000557329 THEMISQ8N1K5 641 aaPredicted RBP5.75□□□□□ -1.49
CHD8-212ENST00000557329 ZNF513Q8N8E2 541 aaPredicted RBP5.75□□□□□ -1.49
CHD8-212ENST00000557329 NUP43Q8NFH3 380 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 COPS5Q92905 334 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 MRGPRX3Q96LB0 322 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 TOX2Q96NM4 488 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.75□□□□□ -1.49
CHD8-212ENST00000557329 NUDT5Q9UKK9 219 aa5.75□□□□□ -1.49
CHD8-212ENST00000557329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.75□□□□□ -1.49
CHD8-212ENST00000557329 CPS1P31327 1500 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 TEX51A0A1B0GUA7 166 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 NOTOA8MTQ0 251 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 NPHS1O60500 1241 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 KCNH1O95259 989 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 GJB6O95452 261 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 SCG5P05408 212 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 MED14OSP0DP75 135 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 IFNGR1P15260 489 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 RAP1GAPP47736 663 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 CBX2Q14781 532 aaPredicted RBP5.74□□□□□ -1.49
CHD8-212ENST00000557329 TIGD5Q53EQ6 642 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 ADGRF1Q5T601 910 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms