RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 DHX32Q7L7V1 743 aaKnown RBP13.81□□□□□ -0.2
SYNE2-226ENST00000557084 TAAR1Q96RJ0 339 aa13.81□□□□□ -0.2
SYNE2-226ENST00000557084 IWS1Q96ST2 819 aa13.81□□□□□ -0.2
SYNE2-226ENST00000557084 GDF15Q99988 308 aa13.81□□□□□ -0.2
SYNE2-226ENST00000557084 NAP1L2Q9ULW6 460 aaPredicted RBP13.81□□□□□ -0.2
SYNE2-226ENST00000557084 GNEQ9Y223 722 aaKnown RBP13.81□□□□□ -0.2
SYNE2-226ENST00000557084 Q9Y3F1 56 aa13.81□□□□□ -0.2
SYNE2-226ENST00000557084 ELP1O95163 1332 aa13.81□□□□□ -0.2
SYNE2-226ENST00000557084 A0A0U1RQG5 324 aaPredicted RBP13.8□□□□□ -0.2
SYNE2-226ENST00000557084 A0A1W2PPC1 479 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 PPP1R11O60927 126 aaPredicted RBP13.8□□□□□ -0.2
SYNE2-226ENST00000557084 CABYRO75952 493 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 EIF2AK2P19525 551 aaKnown RBP13.8□□□□□ -0.2
SYNE2-226ENST00000557084 RXRAP19793 462 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 EDNRBP24530 442 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 CPT1AP50416 773 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 IRX5P78411 483 aaPredicted RBP13.8□□□□□ -0.2
SYNE2-226ENST00000557084 TTLL4Q14679 1199 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 SNX17Q15036 470 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 STXBP2Q15833 593 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 CCSAPQ6IQ19 270 aaPredicted RBP13.8□□□□□ -0.2
SYNE2-226ENST00000557084 MICU3Q86XE3 530 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 RAB11FIP4Q86YS3 637 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 OR6J1Q8NGC5 347 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 SPZ1Q9BXG8 430 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 MAP3K20Q9NYL2 800 aaKnown RBP13.8□□□□□ -0.2
SYNE2-226ENST00000557084 BAZ2BQ9UIF8 2168 aaKnown RBP13.8□□□□□ -0.2
SYNE2-226ENST00000557084 MROH7Q68CQ1 1323 aa13.8□□□□□ -0.2
SYNE2-226ENST00000557084 LAMA3Q16787 3333 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 NKRFO15226 690 aaKnown RBP eCLIP13.79□□□□□ -0.2
SYNE2-226ENST00000557084 CYTH3O43739 400 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 CLTBP09497 229 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 TXNP10599 105 aaKnown RBP13.79□□□□□ -0.2
SYNE2-226ENST00000557084 SMARCA1P28370 1054 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 HOXA13P31271 388 aaPredicted RBP13.79□□□□□ -0.2
SYNE2-226ENST00000557084 BMP8BP34820 402 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 HSD17B4P51659 736 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 TSGA10IPQ3SY00 556 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 CXCL17Q6UXB2 119 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 SEPT14Q6ZU15 432 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 CCDC82Q8N4S0 544 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 SAMD3Q8N6K7 520 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 FANCBQ8NB91 859 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 CUL5Q93034 780 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 TMEM39AQ9NV64 488 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 ALPK3Q96L96 1907 aa13.79□□□□□ -0.2
SYNE2-226ENST00000557084 LAMA2P24043 3122 aaKnown RBP13.79□□□□□ -0.2
SYNE2-226ENST00000557084 RBM47A0AV96 593 aaKnown RBP13.78□□□□□ -0.2
SYNE2-226ENST00000557084 EIF3JO75822 258 aaKnown RBP13.78□□□□□ -0.2
SYNE2-226ENST00000557084 PLEKHA8P1O95397 391 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 NR3C2P08235 984 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 MYCLP12524 364 aaPredicted RBP13.78□□□□□ -0.2
SYNE2-226ENST00000557084 RAG1P15918 1043 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 PTGS1P23219 599 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 SLC35G1Q2M3R5 365 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 TMEM63BQ5T3F8 832 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 SGMS1Q86VZ5 419 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 FCHSD1Q86WN1 690 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 TCEANC2Q96MN5 208 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 JAKMIP1Q96N16 626 aaKnown RBP13.78□□□□□ -0.2
SYNE2-226ENST00000557084 TOX2Q96NM4 488 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 PRO3102Q9H379 93 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 PDLIM7Q9NR12 457 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 PXMP2Q9NR77 195 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 POLR3EQ9NVU0 708 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 COL20A1Q9P218 1284 aa13.78□□□□□ -0.2
SYNE2-226ENST00000557084 ARVCFO00192 962 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 CTAGE5O15320 804 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 TLR3O15455 904 aaKnown RBP13.77□□□□□ -0.21
SYNE2-226ENST00000557084 ZBTB43O43298 467 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 MYL3P08590 195 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 PSMA5P28066 241 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 FXR1P51114 621 aaKnown RBP eCLIP13.77□□□□□ -0.21
SYNE2-226ENST00000557084 NKX3-2P78367 333 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 EXOSC10Q01780 885 aaKnown RBP13.77□□□□□ -0.21
SYNE2-226ENST00000557084 COL9A3Q14050 684 aaPredicted RBP13.77□□□□□ -0.21
SYNE2-226ENST00000557084 ADCK5Q3MIX3 580 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 APOA5Q6Q788 366 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 BLOC1S2Q6QNY1 142 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 TDHQ8IZJ6 230 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.21
SYNE2-226ENST00000557084 SRBD1Q8N5C6 995 aaKnown RBP13.77□□□□□ -0.21
SYNE2-226ENST00000557084 RBM28Q9NW13 759 aaKnown RBP13.77□□□□□ -0.21
SYNE2-226ENST00000557084 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.21
SYNE2-226ENST00000557084 MYH6P13533 1939 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 KLF18A0A0U1RQI7 1052 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 TRIM43BA6NCK2 446 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 OPLAHO14841 1288 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 KPNA6O60684 536 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 CCND2P30279 289 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 HSPA4P34932 840 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 ITGA7Q13683 1181 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 RTN1Q16799 776 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 TMTC3Q6ZXV5 915 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 SH3RF1Q7Z6J0 888 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 SMARCC2Q8TAQ2 1214 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 BADQ92934 168 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 TRIM43Q96BQ3 446 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms