RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CUL5Q93034 780 aa16.28■□□□□ 0.2
SLIRP-207ENST00000556831 RMDN3Q96TC7 470 aa16.28■□□□□ 0.2
SLIRP-207ENST00000556831 AP5M1Q9H0R1 490 aa16.28■□□□□ 0.2
SLIRP-207ENST00000556831 CYP46A1Q9Y6A2 500 aa16.28■□□□□ 0.2
SLIRP-207ENST00000556831 SYNRGQ9UMZ2 1314 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 SOX1O00570 391 aaPredicted RBP16.27■□□□□ 0.2
SLIRP-207ENST00000556831 CYTH3O43739 400 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 CPA1P15085 419 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 ATN1P54259 1190 aaPredicted RBP16.27■□□□□ 0.2
SLIRP-207ENST00000556831 PPP2R5BQ15173 497 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 TMTC3Q6ZXV5 915 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 C7orf61Q8IZ16 206 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 CCDC82Q8N4S0 544 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 PCSK9Q8NBP7 692 aaKnown RBP16.27■□□□□ 0.2
SLIRP-207ENST00000556831 SYTL5Q8TDW5 730 aaPredicted RBP16.27■□□□□ 0.2
SLIRP-207ENST00000556831 BRF1Q92994 677 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 FERMT2Q96AC1 680 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 LRCH3Q96II8 777 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 USP26Q9BXU7 913 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 PDGFCQ9NRA1 345 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 COL20A1Q9P218 1284 aa16.27■□□□□ 0.2
SLIRP-207ENST00000556831 ZMYND8Q9ULU4 1186 aaPredicted RBP16.27■□□□□ 0.2
SLIRP-207ENST00000556831 OPLAHO14841 1288 aa16.26■□□□□ 0.19
SLIRP-207ENST00000556831 ADAMTS4O75173 837 aa16.26■□□□□ 0.19
SLIRP-207ENST00000556831 SYN1P17600 705 aa16.26■□□□□ 0.19
SLIRP-207ENST00000556831 ADCYAP1R1P41586 468 aa16.26■□□□□ 0.19
SLIRP-207ENST00000556831 IQSEC1Q6DN90 963 aa16.26■□□□□ 0.19
SLIRP-207ENST00000556831 CMTR1Q8N1G2 835 aaKnown RBP16.26■□□□□ 0.19
SLIRP-207ENST00000556831 SRBD1Q8N5C6 995 aaKnown RBP16.26■□□□□ 0.19
SLIRP-207ENST00000556831 MORC4Q8TE76 937 aa16.26■□□□□ 0.19
SLIRP-207ENST00000556831 IWS1Q96ST2 819 aa16.26■□□□□ 0.19
SLIRP-207ENST00000556831 TTC28Q96AY4 2481 aa16.26■□□□□ 0.19
SLIRP-207ENST00000556831 MOXD2PA6NHM9 499 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 ZEB2O60315 1214 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 EIF2AK2P19525 551 aaKnown RBP16.25■□□□□ 0.19
SLIRP-207ENST00000556831 HSD17B4P51659 736 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 APOBRQ0VD83 1088 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 STXBP2Q15833 593 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 BRDTQ58F21 947 aaPredicted RBP16.25■□□□□ 0.19
SLIRP-207ENST00000556831 RUFY3Q7L099 469 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 HEATR3Q7Z4Q2 680 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 TLK2Q86UE8 772 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 SMARCC2Q8TAQ2 1214 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 SCFD2Q8WU76 684 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 TSEN34Q9BSV6 310 aaKnown RBP16.25■□□□□ 0.19
SLIRP-207ENST00000556831 PRKAG2Q9UGJ0 569 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 BRPF3Q9ULD4 1205 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 CACNA1AO00555 2505 aa16.25■□□□□ 0.19
SLIRP-207ENST00000556831 CTAGE5O15320 804 aa16.24■□□□□ 0.19
SLIRP-207ENST00000556831 HOXA13P31271 388 aaPredicted RBP16.24■□□□□ 0.19
SLIRP-207ENST00000556831 AKAP17AQ02040 695 aaKnown RBP16.24■□□□□ 0.19
SLIRP-207ENST00000556831 TTLL4Q14679 1199 aa16.24■□□□□ 0.19
SLIRP-207ENST00000556831 GNASQ5JWF2 1037 aa16.24■□□□□ 0.19
SLIRP-207ENST00000556831 FCHSD1Q86WN1 690 aa16.24■□□□□ 0.19
SLIRP-207ENST00000556831 VTI1AQ96AJ9 217 aa16.24■□□□□ 0.19
SLIRP-207ENST00000556831 SNX27Q96L92 541 aa16.24■□□□□ 0.19
SLIRP-207ENST00000556831 GLT1D1Q96MS3 346 aa16.24■□□□□ 0.19
SLIRP-207ENST00000556831 TAAR1Q96RJ0 339 aa16.24■□□□□ 0.19
SLIRP-207ENST00000556831 WDR11Q9BZH6 1224 aa16.24■□□□□ 0.19
SLIRP-207ENST00000556831 TM6SF1Q9BZW5 370 aa16.24■□□□□ 0.19
SLIRP-207ENST00000556831 NKRFO15226 690 aaKnown RBP eCLIP16.23■□□□□ 0.19
SLIRP-207ENST00000556831 EDNRBP24530 442 aa16.23■□□□□ 0.19
SLIRP-207ENST00000556831 GJA9P57773 515 aa16.23■□□□□ 0.19
SLIRP-207ENST00000556831 ANAPC15P60006 121 aa16.23■□□□□ 0.19
SLIRP-207ENST00000556831 TAPT1Q6NXT6 567 aa16.23■□□□□ 0.19
SLIRP-207ENST00000556831 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
SLIRP-207ENST00000556831 STARD7Q9NQZ5 370 aa16.23■□□□□ 0.19
SLIRP-207ENST00000556831 PXMP2Q9NR77 195 aa16.23■□□□□ 0.19
SLIRP-207ENST00000556831 PHF24Q9UPV7 400 aa16.23■□□□□ 0.19
SLIRP-207ENST00000556831 ATP11BQ9Y2G3 1177 aa16.23■□□□□ 0.19
SLIRP-207ENST00000556831 CNTNAP5Q8WYK1 1306 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 A0A1W2PQ45 241 aaPredicted RBP16.22■□□□□ 0.19
SLIRP-207ENST00000556831 A0A1W2PQY0 241 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 hCG_1642624A0A1W2PR95 340 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 hCG_1984214I3L0E3 225 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 DYNC1LI2O43237 492 aaPredicted RBP16.22■□□□□ 0.19
SLIRP-207ENST00000556831 MYCLP12524 364 aaPredicted RBP16.22■□□□□ 0.19
SLIRP-207ENST00000556831 SMPD1P17405 629 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 CST5P28325 142 aaPredicted RBP16.22■□□□□ 0.19
SLIRP-207ENST00000556831 CCND2P30279 289 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 CPT1AP50416 773 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 ACLYP53396 1101 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 NAPAP54920 295 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 BEX3Q00994 111 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 GHRHRQ02643 423 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 FSCN1Q16658 493 aaKnown RBP16.22■□□□□ 0.19
SLIRP-207ENST00000556831 DUSP28Q4G0W2 176 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 FBXL16Q8N461 479 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 ZNF713Q8N859 430 aaPredicted RBP16.22■□□□□ 0.19
SLIRP-207ENST00000556831 OR6J1Q8NGC5 347 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 SYMPKQ92797 1274 aaKnown RBP16.22■□□□□ 0.19
SLIRP-207ENST00000556831 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
SLIRP-207ENST00000556831 UPF3AQ9H1J1 476 aaKnown RBP16.22■□□□□ 0.19
SLIRP-207ENST00000556831 EHMT1Q9H9B1 1298 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 PDRG1Q9NUG6 133 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 Q9Y3F1 56 aa16.22■□□□□ 0.19
SLIRP-207ENST00000556831 SPDYE3A6NKU9 549 aa16.21■□□□□ 0.19
SLIRP-207ENST00000556831 CPLX1O14810 134 aa16.21■□□□□ 0.19
SLIRP-207ENST00000556831 EIF3JO75822 258 aaKnown RBP16.21■□□□□ 0.19
SLIRP-207ENST00000556831 NR3C2P08235 984 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms