RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 JAK2O60674 1132 aa20.11■□□□□ 0.81
SHMT2-225ENST00000556798 DEXIO95424 95 aa20.11■□□□□ 0.81
SHMT2-225ENST00000556798 ZNF865P0CJ78 1059 aaPredicted RBP20.11■□□□□ 0.81
SHMT2-225ENST00000556798 ARHGEF16Q5VV41 709 aa20.11■□□□□ 0.81
SHMT2-225ENST00000556798 ANO1Q5XXA6 986 aa20.11■□□□□ 0.81
SHMT2-225ENST00000556798 FBXO16Q8IX29 292 aaPredicted RBP20.11■□□□□ 0.81
SHMT2-225ENST00000556798 SAMD3Q8N6K7 520 aa20.11■□□□□ 0.81
SHMT2-225ENST00000556798 NSUN7Q8NE18 718 aaKnown RBP20.11■□□□□ 0.81
SHMT2-225ENST00000556798 ZSCAN31Q96LW9 406 aaPredicted RBP20.11■□□□□ 0.81
SHMT2-225ENST00000556798 KATNBL1Q9H079 304 aa20.11■□□□□ 0.81
SHMT2-225ENST00000556798 PXMP2Q9NR77 195 aa20.11■□□□□ 0.81
SHMT2-225ENST00000556798 MAP3K20Q9NYL2 800 aaKnown RBP20.11■□□□□ 0.81
SHMT2-225ENST00000556798 MYH7BA7E2Y1 1941 aa20.1■□□□□ 0.81
SHMT2-225ENST00000556798 SMCO2A6NFE2 343 aa20.1■□□□□ 0.81
SHMT2-225ENST00000556798 PIK3CDO00329 1044 aa20.1■□□□□ 0.81
SHMT2-225ENST00000556798 ADCY7P51828 1080 aa20.1■□□□□ 0.81
SHMT2-225ENST00000556798 ACVR2BQ13705 512 aa20.1■□□□□ 0.81
SHMT2-225ENST00000556798 MORC4Q8TE76 937 aa20.1■□□□□ 0.81
SHMT2-225ENST00000556798 NSUN6Q8TEA1 469 aaKnown RBP20.1■□□□□ 0.81
SHMT2-225ENST00000556798 ABHD16BQ9H3Z7 469 aa20.1■□□□□ 0.81
SHMT2-225ENST00000556798 SH2B1Q9NRF2 756 aaPredicted RBP20.1■□□□□ 0.81
SHMT2-225ENST00000556798 ORC3Q9UBD5 711 aaPredicted RBP20.1■□□□□ 0.81
SHMT2-225ENST00000556798 GJB1P08034 283 aa20.09■□□□□ 0.81
SHMT2-225ENST00000556798 EDNRBP24530 442 aa20.09■□□□□ 0.81
SHMT2-225ENST00000556798 PDE4DQ08499 809 aa20.09■□□□□ 0.81
SHMT2-225ENST00000556798 IL31RAQ8NI17 732 aa20.09■□□□□ 0.81
SHMT2-225ENST00000556798 LENG1Q96BZ8 264 aaPredicted RBP20.09■□□□□ 0.81
SHMT2-225ENST00000556798 MPHOSPH6Q99547 160 aaKnown RBP20.09■□□□□ 0.81
SHMT2-225ENST00000556798 RIC8AQ9NPQ8 531 aa20.09■□□□□ 0.81
SHMT2-225ENST00000556798 DDX20Q9UHI6 824 aaKnown RBP20.09■□□□□ 0.81
SHMT2-225ENST00000556798 NRBP1Q9UHY1 535 aa20.09■□□□□ 0.81
SHMT2-225ENST00000556798 DOCK5Q9H7D0 1870 aa20.08■□□□□ 0.81
SHMT2-225ENST00000556798 LOC102724159A0A0B4J2E5 919 aa20.08■□□□□ 0.81
SHMT2-225ENST00000556798 ADAMTS3O15072 1205 aa20.08■□□□□ 0.81
SHMT2-225ENST00000556798 SEPT4O43236 478 aa20.08■□□□□ 0.81
SHMT2-225ENST00000556798 FDPSP14324 419 aaKnown RBP20.08■□□□□ 0.81
SHMT2-225ENST00000556798 PWP2Q15269 919 aaKnown RBP20.08■□□□□ 0.81
SHMT2-225ENST00000556798 U2AF1L4Q8WU68 220 aaKnown RBP20.08■□□□□ 0.81
SHMT2-225ENST00000556798 CCDC12Q8WUD4 166 aaPredicted RBP20.08■□□□□ 0.81
SHMT2-225ENST00000556798 PGBD1Q96JS3 809 aa20.08■□□□□ 0.81
SHMT2-225ENST00000556798 PDCD2LQ9BRP1 358 aa20.08■□□□□ 0.81
SHMT2-225ENST00000556798 TMEM260Q9NX78 707 aa20.08■□□□□ 0.81
SHMT2-225ENST00000556798 ESYT2A0FGR8 921 aa20.07■□□□□ 0.8
SHMT2-225ENST00000556798 ADCY6O43306 1168 aa20.07■□□□□ 0.8
SHMT2-225ENST00000556798 MYCLP12524 364 aaPredicted RBP20.07■□□□□ 0.8
SHMT2-225ENST00000556798 EN2P19622 333 aaPredicted RBP20.07■□□□□ 0.8
SHMT2-225ENST00000556798 MRPL12P52815 198 aaKnown RBP20.07■□□□□ 0.8
SHMT2-225ENST00000556798 PGM5Q15124 567 aa20.07■□□□□ 0.8
SHMT2-225ENST00000556798 CCDC144BQ3MJ40 725 aa20.07■□□□□ 0.8
SHMT2-225ENST00000556798 CCDC148Q8NFR7 591 aa20.07■□□□□ 0.8
SHMT2-225ENST00000556798 TMX3Q96JJ7 454 aa20.07■□□□□ 0.8
SHMT2-225ENST00000556798 ZFP91Q96JP5 570 aaPredicted RBP20.07■□□□□ 0.8
SHMT2-225ENST00000556798 ZMYND12Q9H0C1 365 aa20.07■□□□□ 0.8
SHMT2-225ENST00000556798 VTA1Q9NP79 307 aa20.07■□□□□ 0.8
SHMT2-225ENST00000556798 PDGFCQ9NRA1 345 aa20.07■□□□□ 0.8
SHMT2-225ENST00000556798 GJB4Q9NTQ9 266 aa20.07■□□□□ 0.8
SHMT2-225ENST00000556798 FRMPD4Q14CM0 1322 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.06■□□□□ 0.8
SHMT2-225ENST00000556798 SPDYE3A6NKU9 549 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 B4DLN1 442 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 SGPL1O95470 568 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 NR3C2P08235 984 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 AKR1A1P14550 325 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 ADCYAP1R1P41586 468 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 GJA8P48165 433 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 FOSBP53539 338 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 LHX8Q68G74 356 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 TAPT1Q6NXT6 567 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 IL27Q8NEV9 243 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 IWS1Q96ST2 819 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 C6orf50Q9HD87 102 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 SH3GLB2Q9NR46 395 aa20.06■□□□□ 0.8
SHMT2-225ENST00000556798 PTGS1P23219 599 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 MCM2P49736 904 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 NLRP5P59047 1200 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 STXBP2Q15833 593 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 TMEM63BQ5T3F8 832 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 JAKMIP3Q5VZ66 844 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 RASGRP4Q8TDF6 673 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 ALG1Q9BT22 464 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 FAM184BQ9ULE4 1060 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 PCDHA6Q9UN73 950 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 KCNJ14Q9UNX9 436 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 PCDHA8Q9Y5H6 950 aa20.05■□□□□ 0.8
SHMT2-225ENST00000556798 MSCO60682 206 aa20.04■□□□□ 0.8
SHMT2-225ENST00000556798 TFRCP02786 760 aaKnown RBP20.04■□□□□ 0.8
SHMT2-225ENST00000556798 CCND2P30279 289 aa20.04■□□□□ 0.8
SHMT2-225ENST00000556798 CLK2P49760 499 aaKnown RBP20.04■□□□□ 0.8
SHMT2-225ENST00000556798 SEPT14Q6ZU15 432 aa20.04■□□□□ 0.8
SHMT2-225ENST00000556798 ANO3Q9BYT9 981 aa20.04■□□□□ 0.8
SHMT2-225ENST00000556798 CRISPLD2Q9H0B8 497 aa20.04■□□□□ 0.8
SHMT2-225ENST00000556798 GLT8D2Q9H1C3 349 aa20.04■□□□□ 0.8
SHMT2-225ENST00000556798 RARBP10826 455 aa20.03■□□□□ 0.8
SHMT2-225ENST00000556798 GNA11P29992 359 aa20.03■□□□□ 0.8
SHMT2-225ENST00000556798 GJC2Q5T442 439 aaPredicted RBP20.03■□□□□ 0.8
SHMT2-225ENST00000556798 VSIG10LQ86VR7 867 aa20.03■□□□□ 0.8
SHMT2-225ENST00000556798 REXO1Q8N1G1 1221 aaKnown RBP20.03■□□□□ 0.8
SHMT2-225ENST00000556798 WASF1Q92558 559 aa20.03■□□□□ 0.8
SHMT2-225ENST00000556798 LLPHQ9BRT6 129 aaKnown RBP20.03■□□□□ 0.8
SHMT2-225ENST00000556798 MYCNP04198 464 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms