RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ADAMTS1Q9UHI8 967 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 GGT7Q9UJ14 662 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 TTC21BQ7Z4L5 1316 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 MON2Q7Z3U7 1717 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 PHRF1Q9P1Y6 1649 aaKnown RBP6.37□□□□□ -1.39
ATXN3-243ENST00000556671 TMEM253P0C7T8 217 aa6.37□□□□□ -1.39
ATXN3-243ENST00000556671 GLDCP23378 1020 aa6.37□□□□□ -1.39
ATXN3-243ENST00000556671 NBPF12Q5TAG4 269 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-243ENST00000556671 NME9Q86XW9 330 aa6.37□□□□□ -1.39
ATXN3-243ENST00000556671 DAGLBQ8NCG7 672 aa6.37□□□□□ -1.39
ATXN3-243ENST00000556671 LINC01599Q8WXQ3 324 aa6.37□□□□□ -1.39
ATXN3-243ENST00000556671 G6PC3Q9BUM1 346 aa6.37□□□□□ -1.39
ATXN3-243ENST00000556671 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
ATXN3-243ENST00000556671 SLC6A17Q9H1V8 727 aa6.37□□□□□ -1.39
ATXN3-243ENST00000556671 CNNM2Q9H8M5 875 aa6.37□□□□□ -1.39
ATXN3-243ENST00000556671 CD320Q9NPF0 282 aa6.37□□□□□ -1.39
ATXN3-243ENST00000556671 TRPC5Q9UL62 973 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-243ENST00000556671 RGPD2P0DJD1 1756 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 COL14A1Q05707 1796 aaKnown RBP6.36□□□□□ -1.39
ATXN3-243ENST00000556671 POLR3AO14802 1390 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-243ENST00000556671 ETV2O00321 342 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-243ENST00000556671 GCP02774 474 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 POLR2BP30876 1174 aaKnown RBP6.36□□□□□ -1.39
ATXN3-243ENST00000556671 RBM6P78332 1123 aaKnown RBP6.36□□□□□ -1.39
ATXN3-243ENST00000556671 SNX17Q15036 470 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 NBPF9Q3BBW0 867 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 RNF111Q6ZNA4 994 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 ATG14Q6ZNE5 492 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 LCNL1Q6ZST4 164 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 UNC5CLQ8IV45 518 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 REXO1Q8N1G1 1221 aaKnown RBP6.36□□□□□ -1.39
ATXN3-243ENST00000556671 USHBP1Q8N6Y0 703 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 ATG4CQ96DT6 458 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 LTV1Q96GA3 475 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-243ENST00000556671 UBP1Q9NZI7 540 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 YBX2Q9Y2T7 364 aaKnown RBP6.36□□□□□ -1.39
ATXN3-243ENST00000556671 NWD2Q9ULI1 1742 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 CRYBG1Q9Y4K1 1723 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 PIK3C2AO00443 1686 aa6.36□□□□□ -1.39
ATXN3-243ENST00000556671 USP6P35125 1406 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 KIAA0232Q92628 1395 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 NPIPB6E9PJ23 425 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 PPM1GO15355 546 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-243ENST00000556671 FBLN1P23142 703 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 CCNFP41002 786 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 TNNT2P45379 298 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-243ENST00000556671 CLCQ05315 142 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 RAD51AP2Q09MP3 1159 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 KCNA10Q16322 511 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 SEZ6Q53EL9 994 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 NLRC3Q7RTR2 1065 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 TMC3Q7Z5M5 1100 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 SIAH1Q8IUQ4 282 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 ZNF655Q8N720 491 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-243ENST00000556671 SHISA4Q96DD7 197 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 TCTN2Q96GX1 697 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 INTS4Q96HW7 963 aaKnown RBP6.35□□□□□ -1.39
ATXN3-243ENST00000556671 COG3Q96JB2 828 aa6.35□□□□□ -1.39
ATXN3-243ENST00000556671 TTC21AQ8NDW8 1320 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 TCAF2A6NFQ2 919 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 NOTOA8MTQ0 251 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 PSPNO60542 156 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 AMPHP49418 695 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 APOBRQ0VD83 1088 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 SNW1Q13573 536 aaKnown RBP6.34□□□□□ -1.39
ATXN3-243ENST00000556671 GK5Q6ZS86 529 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 TOM1L2Q6ZVM7 507 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 SLITRK4Q8IW52 837 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 KCNH5Q8NCM2 988 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 KCNN1Q92952 543 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 PUS7Q96PZ0 661 aaKnown RBP6.34□□□□□ -1.39
ATXN3-243ENST00000556671 NT5C1AQ9BXI3 368 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 FOXP3Q9BZS1 431 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 MCOLN1Q9GZU1 580 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 BCL11AQ9H165 835 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 PANK3Q9H999 370 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 GPR160Q9UJ42 338 aa6.34□□□□□ -1.39
ATXN3-243ENST00000556671 A0A1W2PP64 1363 aa6.33□□□□□ -1.4
ATXN3-243ENST00000556671 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
ATXN3-243ENST00000556671 MYOM1P52179 1685 aa6.33□□□□□ -1.4
ATXN3-243ENST00000556671 MEIS3P2A8K0S8 358 aa6.33□□□□□ -1.4
ATXN3-243ENST00000556671 PEX10O60683 326 aa6.33□□□□□ -1.4
ATXN3-243ENST00000556671 ZSCAN22P10073 491 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-243ENST00000556671 NME1P15531 152 aaKnown RBP6.33□□□□□ -1.4
ATXN3-243ENST00000556671 RPL10P27635 214 aaKnown RBP6.33□□□□□ -1.4
ATXN3-243ENST00000556671 ZNF165P49910 485 aa6.33□□□□□ -1.4
ATXN3-243ENST00000556671 LDLRAD1Q5T700 205 aa6.33□□□□□ -1.4
ATXN3-243ENST00000556671 LINC00116Q8NCU8 138 aa6.33□□□□□ -1.4
ATXN3-243ENST00000556671 ZNF552Q9H707 407 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-243ENST00000556671 TCFL5Q9UL49 500 aa6.33□□□□□ -1.4
ATXN3-243ENST00000556671 SMG5Q9UPR3 1016 aaKnown RBP6.33□□□□□ -1.4
ATXN3-243ENST00000556671 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.33□□□□□ -1.4
ATXN3-243ENST00000556671 CPSF1Q10570 1443 aaKnown RBP6.33□□□□□ -1.4
ATXN3-243ENST00000556671 BRD4O60885 1362 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-243ENST00000556671 MYOCOSA0A1B0GUC4 107 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 TMEM82A0PJX8 343 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 TNFRSF10CO14798 259 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 FYB1O15117 783 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 SIGLEC6O43699 453 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 CLEC3AO75596 197 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms