RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 EPSTI1Q96J88 318 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 MED15Q96RN5 788 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 NAT10Q9H0A0 1025 aaKnown RBP5.68□□□□□ -1.5
TMEM260-210ENST00000556422 ATP6V0A2Q9Y487 856 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 PCDHGA4Q9Y5G9 962 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 PSME4Q14997 1843 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 PLSCR1O15162 318 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 AKAP17AQ02040 695 aaKnown RBP5.68□□□□□ -1.5
TMEM260-210ENST00000556422 GRM4Q14833 912 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 SEPT2Q15019 361 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 IL17AQ16552 155 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 LONRF1Q17RB8 773 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 LRRC8AQ8IWT6 810 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 SP8Q8IXZ3 490 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 GRAMD1CQ8IYS0 662 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 CNNM3Q8NE01 707 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 GPKOWQ92917 476 aaPredicted RBP eCLIP5.68□□□□□ -1.5
TMEM260-210ENST00000556422 TBC1D31Q96DN5 1066 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 RSRC1Q96IZ7 334 aaKnown RBP5.68□□□□□ -1.5
TMEM260-210ENST00000556422 TMEM47Q9BQJ4 181 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 DAGLAQ9Y4D2 1042 aa5.68□□□□□ -1.5
TMEM260-210ENST00000556422 PABPN1LA6NDY0 278 aaKnown RBP5.67□□□□□ -1.5
TMEM260-210ENST00000556422 TRIM75PA6NK02 468 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 IKBKBO14920 756 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 TSPY3P0CV98 308 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 TSPY8P0CW00 308 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 CDK8P49336 464 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 NT5C2P49902 561 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 ATP2C1P98194 919 aaPredicted RBP5.67□□□□□ -1.5
TMEM260-210ENST00000556422 POSTNQ15063 836 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 DRC7Q8IY82 874 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 CCDC26Q8TAB7 109 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 NEK9Q8TD19 979 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 UBXN4Q92575 508 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 KAT14Q9H8E8 782 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 CD248Q9HCU0 757 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 C6orf203Q9P0P8 240 aaPredicted RBP5.67□□□□□ -1.5
TMEM260-210ENST00000556422 SEL1LQ9UBV2 794 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 SERTAD1Q9UHV2 236 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 PALM3A6NDB9 673 aaPredicted RBP5.67□□□□□ -1.5
TMEM260-210ENST00000556422 LDHCP07864 332 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 STIP1P31948 543 aaKnown RBP5.67□□□□□ -1.5
TMEM260-210ENST00000556422 USP8P40818 1118 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 GTF2IP78347 998 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 CCZ1BP86790 482 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 CCZ1P86791 482 aaPredicted RBP5.67□□□□□ -1.5
TMEM260-210ENST00000556422 WASHC5Q12768 1159 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 KIF4BQ2VIQ3 1234 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 TEX35Q5T0J7 233 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 TEX11Q8IYF3 940 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 RUFY1Q96T51 708 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 MXD3Q9BW11 206 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 XPO4Q9C0E2 1151 aaKnown RBP5.67□□□□□ -1.5
TMEM260-210ENST00000556422 MKNK2Q9HBH9 465 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 DDX4Q9NQI0 724 aaKnown RBP5.67□□□□□ -1.5
TMEM260-210ENST00000556422 PLIN4Q96Q06 1357 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 ARFGEF1Q9Y6D6 1849 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 C6orf229H3BNL8 230 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 KIAA0754O94854 1291 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 TRPC1P48995 793 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 KIF11P52732 1056 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 GABPAQ06546 454 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 PTGDRQ13258 359 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 TERF2Q15554 542 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 PIK3AP1Q6ZUJ8 805 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 CCDC80Q76M96 950 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 SH3RF1Q7Z6J0 888 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 HOOK3Q86VS8 718 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 KIAA0825Q8IV33 1275 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 SLF2Q8IX21 1173 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 C4orf32Q8N8J7 132 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 SYMPKQ92797 1274 aaKnown RBP5.67□□□□□ -1.5
TMEM260-210ENST00000556422 CPVLQ9H3G5 476 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 MAN1B1Q9UKM7 699 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 STX8Q9UNK0 236 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 CEP131Q9UPN4 1083 aa5.67□□□□□ -1.5
TMEM260-210ENST00000556422 MYH7BA7E2Y1 1941 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 MYO1CO00159 1063 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 RIMBP2O15034 1052 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 AP1G2O75843 785 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 TRIM21P19474 475 aaKnown RBP5.66□□□□□ -1.5
TMEM260-210ENST00000556422 IBSPP21815 317 aaPredicted RBP5.66□□□□□ -1.5
TMEM260-210ENST00000556422 LMOD1P29536 600 aaPredicted RBP5.66□□□□□ -1.5
TMEM260-210ENST00000556422 KIF5BP33176 963 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 FMR1Q06787 632 aaKnown RBP eCLIP5.66□□□□□ -1.5
TMEM260-210ENST00000556422 MORC3Q14149 939 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 ZNF174Q15697 407 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 TTC38Q5R3I4 469 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 TMC4Q7Z404 712 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 LMNTD2Q8IXW0 634 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 NEDD1Q8NHV4 660 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 RASGRP4Q8TDF6 673 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 DPF2Q92785 391 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 CEP95Q96GE4 821 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 MTRQ99707 1265 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 OSBPL5Q9H0X9 879 aaPredicted RBP5.66□□□□□ -1.5
TMEM260-210ENST00000556422 SLFN14P0C7P3 912 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 GOLGA8HP0CJ92 632 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 CD53P19397 219 aa5.66□□□□□ -1.5
TMEM260-210ENST00000556422 CASP1P29466 404 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms