RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 U2AF1L5P0DN76 240 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-241ENST00000556374 TNNT2P45379 298 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-241ENST00000556374 U2AF1Q01081 240 aaKnown RBP eCLIP5.48□□□□□ -1.53
ATXN3-241ENST00000556374 DUSP4Q13115 394 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 CCDC27Q2M243 656 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 L1TD1Q5T7N2 865 aaKnown RBP5.48□□□□□ -1.53
ATXN3-241ENST00000556374 FBXO33Q7Z6M2 555 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 CREG2Q8IUH2 290 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 ANKS4BQ8N8V4 417 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 CHMP4BQ9H444 224 aaKnown RBP5.48□□□□□ -1.53
ATXN3-241ENST00000556374 NSUN3Q9H649 340 aaKnown RBP5.48□□□□□ -1.53
ATXN3-241ENST00000556374 DCP1AQ9NPI6 582 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-241ENST00000556374 KCNQ5Q9NR82 932 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 ZNF281Q9Y2X9 895 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 WDR90Q96KV7 1748 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 PARP4Q9UKK3 1724 aaKnown RBP5.48□□□□□ -1.53
ATXN3-241ENST00000556374 KIF16BQ96L93 1317 aa5.48□□□□□ -1.53
ATXN3-241ENST00000556374 MAP3K5Q99683 1374 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 DNAJC25-GNG10A0A024R161 153 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 CTSHP09668 335 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 ZGLP1P0C6A0 271 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 HSPA6P17066 643 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 RALGPS1Q5JS13 557 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 ZKSCAN2Q63HK3 967 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 HDGFL2Q7Z4V5 671 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-241ENST00000556374 LRRC56Q8IYG6 542 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-241ENST00000556374 TCP11L2Q8N4U5 519 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 JARID2Q92833 1246 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-241ENST00000556374 VWCEQ96DN2 955 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 LRRC3Q9BY71 257 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 C14orf93Q9H972 538 aaKnown RBP5.47□□□□□ -1.53
ATXN3-241ENST00000556374 SP110Q9HB58 689 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 CD320Q9NPF0 282 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 SMC4Q9NTJ3 1288 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 TERF2IPQ9NYB0 399 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 TLR6Q9Y2C9 796 aa5.47□□□□□ -1.53
ATXN3-241ENST00000556374 WNK3Q9BYP7 1800 aa5.46□□□□□ -1.53
ATXN3-241ENST00000556374 COL24A1Q17RW2 1714 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 PHRF1Q9P1Y6 1649 aaKnown RBP5.46□□□□□ -1.54
ATXN3-241ENST00000556374 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 HRKO00198 91 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 SEMA7AO75326 666 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 C1QTNF9P0C862 333 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 CCNFP41002 786 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 MTHFSP49914 203 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 PRELPP51888 382 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 RARSP54136 660 aaKnown RBP5.46□□□□□ -1.54
ATXN3-241ENST00000556374 CALD1Q05682 793 aaKnown RBP5.46□□□□□ -1.54
ATXN3-241ENST00000556374 EGR3Q06889 387 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 RAD51AP2Q09MP3 1159 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 MVPQ14764 893 aaKnown RBP5.46□□□□□ -1.54
ATXN3-241ENST00000556374 MAP3K11Q16584 847 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 FAM196AQ6ZSG2 479 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 SKAP1Q86WV1 359 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 HSCBQ8IWL3 235 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 PANK1Q8TE04 598 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 KREMEN1Q96MU8 473 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 DPH2Q9BQC3 489 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-241ENST00000556374 SYT17Q9BSW7 474 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 ADAMTS10Q9H324 1103 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 DDX19BQ9UMR2 479 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 RRP7AQ9Y3A4 280 aaKnown RBP5.46□□□□□ -1.54
ATXN3-241ENST00000556374 ATP10DQ9P241 1426 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 IL16Q14005 1332 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 SPATA31A5Q5VU36 1347 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 SPATA31A7Q8IWB4 1347 aa5.46□□□□□ -1.54
ATXN3-241ENST00000556374 ITSN1Q15811 1721 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 LRRC37A3O60309 1634 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 ARHGEF10O15013 1369 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 AKAP12Q02952 1782 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 TCAF2A6NFQ2 919 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 RGS13O14921 159 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 U2SURPO15042 1029 aaKnown RBP5.45□□□□□ -1.54
ATXN3-241ENST00000556374 IPO8O15397 1037 aaKnown RBP5.45□□□□□ -1.54
ATXN3-241ENST00000556374 ATE1O95260 518 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 ZBTB7AO95365 584 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 PF4P02776 101 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 ENDOUP21128 410 aaKnown RBP5.45□□□□□ -1.54
ATXN3-241ENST00000556374 RNF4P78317 190 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 KCNA10Q16322 511 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 BNC2Q6ZN30 1099 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-241ENST00000556374 SYTL5Q8TDW5 730 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-241ENST00000556374 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.45□□□□□ -1.54
ATXN3-241ENST00000556374 POGKQ9P215 609 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 REV1Q9UBZ9 1251 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 ATP7BP35670 1465 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 PAPPAQ13219 1627 aa5.45□□□□□ -1.54
ATXN3-241ENST00000556374 A0A1W2PP64 1363 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 FAM83GA6ND36 823 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 HTR3BO95264 441 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 F13A1P00488 732 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 PTMSP20962 102 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 HK2P52789 917 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 LMOD3Q0VAK6 560 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 QSER1Q2KHR3 1735 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 RNF111Q6ZNA4 994 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 REC114Q7Z4M0 266 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 ITPRIPQ8IWB1 547 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 KCNN1Q92952 543 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms