RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 SPC25Q9HBM1 224 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 PXMP2Q9NR77 195 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 PHF24Q9UPV7 400 aa17.54■□□□□ 0.4
ACTN1-217ENST00000556203 CCDC196A0A1B0GTZ2 297 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 H0YGN5 161 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 SEC24BO95487 1268 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 GJA9P57773 515 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 FUT2Q10981 343 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 TOB2Q14106 344 aaPredicted RBP17.53■□□□□ 0.4
ACTN1-217ENST00000556203 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 TMEM63BQ5T3F8 832 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 HEATR3Q7Z4Q2 680 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 FCHSD1Q86WN1 690 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 C7orf61Q8IZ16 206 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 WDR11Q9BZH6 1224 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 PDRG1Q9NUG6 133 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 NR2E3Q9Y5X4 410 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 MCM3APO60318 1980 aa17.53■□□□□ 0.4
ACTN1-217ENST00000556203 BAZ2BQ9UIF8 2168 aaKnown RBP17.52■□□□□ 0.4
ACTN1-217ENST00000556203 RBM47A0AV96 593 aaKnown RBP17.52■□□□□ 0.4
ACTN1-217ENST00000556203 DYNC1LI2O43237 492 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-217ENST00000556203 NR3C2P08235 984 aa17.52■□□□□ 0.4
ACTN1-217ENST00000556203 CST5P28325 142 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-217ENST00000556203 ADD1P35611 737 aaKnown RBP17.52■□□□□ 0.4
ACTN1-217ENST00000556203 ANAPC15P60006 121 aa17.52■□□□□ 0.4
ACTN1-217ENST00000556203 STXBP2Q15833 593 aa17.52■□□□□ 0.4
ACTN1-217ENST00000556203 KCNA10Q16322 511 aa17.52■□□□□ 0.4
ACTN1-217ENST00000556203 DUSP28Q4G0W2 176 aa17.52■□□□□ 0.4
ACTN1-217ENST00000556203 CCSAPQ6IQ19 270 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-217ENST00000556203 GPKOWQ92917 476 aaPredicted RBP eCLIP17.52■□□□□ 0.4
ACTN1-217ENST00000556203 CUL5Q93034 780 aa17.52■□□□□ 0.4
ACTN1-217ENST00000556203 PDCD2LQ9BRP1 358 aa17.52■□□□□ 0.4
ACTN1-217ENST00000556203 TSEN34Q9BSV6 310 aaKnown RBP17.52■□□□□ 0.4
ACTN1-217ENST00000556203 AP5M1Q9H0R1 490 aa17.52■□□□□ 0.4
ACTN1-217ENST00000556203 V9GY48 417 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-217ENST00000556203 LRRC37A2A6NM11 1700 aa17.52■□□□□ 0.39
ACTN1-217ENST00000556203 NID2Q14112 1375 aa17.52■□□□□ 0.39
ACTN1-217ENST00000556203 A0A1W2PQ45 241 aaPredicted RBP17.51■□□□□ 0.39
ACTN1-217ENST00000556203 A0A1W2PQY0 241 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 MOXD2PA6NHM9 499 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 CTAGE5O15320 804 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 PDIA3P30101 505 aaKnown RBP17.51■□□□□ 0.39
ACTN1-217ENST00000556203 EVCP57679 992 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 NKX3-2P78367 333 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 BEX3Q00994 111 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 GNASQ5JWF2 1037 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 PDE4DIPQ5VU43 2346 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 WWC2Q6AWC2 1192 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 SLC39A5Q6ZMH5 540 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 PCSK9Q8NBP7 692 aaKnown RBP17.51■□□□□ 0.39
ACTN1-217ENST00000556203 SMARCC2Q8TAQ2 1214 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 SCFD2Q8WU76 684 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 LARP6Q9BRS8 491 aaKnown RBP17.51■□□□□ 0.39
ACTN1-217ENST00000556203 PSTPIP2Q9H939 334 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 Q9Y3F1 56 aa17.51■□□□□ 0.39
ACTN1-217ENST00000556203 TNRC18O15417 2968 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-217ENST00000556203 PIK3CDO00329 1044 aa17.5■□□□□ 0.39
ACTN1-217ENST00000556203 MYCLP12524 364 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-217ENST00000556203 ACLYP53396 1101 aa17.5■□□□□ 0.39
ACTN1-217ENST00000556203 PGM5Q15124 567 aa17.5■□□□□ 0.39
ACTN1-217ENST00000556203 C8orf34Q49A92 452 aa17.5■□□□□ 0.39
ACTN1-217ENST00000556203 USP17L6PQ6QN14 398 aa17.5■□□□□ 0.39
ACTN1-217ENST00000556203 SEPT14Q6ZU15 432 aa17.5■□□□□ 0.39
ACTN1-217ENST00000556203 MYH6P13533 1939 aa17.49■□□□□ 0.39
ACTN1-217ENST00000556203 MEIS2O14770 477 aa17.49■□□□□ 0.39
ACTN1-217ENST00000556203 EIF3JO75822 258 aaKnown RBP17.49■□□□□ 0.39
ACTN1-217ENST00000556203 ARIH2O95376 493 aa17.49■□□□□ 0.39
ACTN1-217ENST00000556203 ASGR1P07306 291 aa17.49■□□□□ 0.39
ACTN1-217ENST00000556203 TXNP10599 105 aaKnown RBP17.49■□□□□ 0.39
ACTN1-217ENST00000556203 RTP1P59025 263 aa17.49■□□□□ 0.39
ACTN1-217ENST00000556203 CCT2P78371 535 aaKnown RBP17.49■□□□□ 0.39
ACTN1-217ENST00000556203 TTLL4Q14679 1199 aa17.49■□□□□ 0.39
ACTN1-217ENST00000556203 FSCN1Q16658 493 aaKnown RBP17.49■□□□□ 0.39
ACTN1-217ENST00000556203 IL31RAQ8NI17 732 aa17.49■□□□□ 0.39
ACTN1-217ENST00000556203 STARD7Q9NQZ5 370 aa17.49■□□□□ 0.39
ACTN1-217ENST00000556203 ZMYND8Q9ULU4 1186 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-217ENST00000556203 NKRFO15226 690 aaKnown RBP eCLIP17.48■□□□□ 0.391e-6■■□□□ 13.9
ACTN1-217ENST00000556203 ZEB2O60315 1214 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 NAPAP54920 295 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 SNX17Q15036 470 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 TRIM60Q495X7 471 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 TYW1BQ6NUM6 668 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 VSIG10LQ86VR7 867 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 OR6J1Q8NGC5 347 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 COPS5Q92905 334 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 IL17RAQ96F46 866 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 GLT1D1Q96MS3 346 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
ACTN1-217ENST00000556203 ATP11BQ9Y2G3 1177 aa17.48■□□□□ 0.39
ACTN1-217ENST00000556203 FRMPD4Q14CM0 1322 aa17.47■□□□□ 0.39
ACTN1-217ENST00000556203 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
ACTN1-217ENST00000556203 STXBP3O00186 592 aa17.47■□□□□ 0.39
ACTN1-217ENST00000556203 SYN1P17600 705 aa17.47■□□□□ 0.39
ACTN1-217ENST00000556203 CCND2P30279 289 aa17.47■□□□□ 0.39
ACTN1-217ENST00000556203 UBE2SQ16763 222 aa17.47■□□□□ 0.39
ACTN1-217ENST00000556203 PFKFB3Q16875 520 aaPredicted RBP17.47■□□□□ 0.39
ACTN1-217ENST00000556203 PPP1R18Q6NYC8 613 aa17.47■□□□□ 0.39
ACTN1-217ENST00000556203 CCDC62Q6P9F0 684 aa17.47■□□□□ 0.39
ACTN1-217ENST00000556203 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
ACTN1-217ENST00000556203 PHKBQ93100 1093 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms