RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SYTL5Q8TDW5 730 aaPredicted RBP12.57□□□□□ -0.4
TMEM260-208ENST00000555905 PGBD1Q96JS3 809 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 NAP1L4Q99733 375 aaKnown RBP12.57□□□□□ -0.4
TMEM260-208ENST00000555905 CYP39A1Q9NYL5 469 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 RTEL1Q9NZ71 1219 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 CPA4Q9UI42 421 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 CEP131Q9UPN4 1083 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 CNPY2Q9Y2B0 182 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 ADGRA2Q96PE1 1338 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 MYH7BA7E2Y1 1941 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 BMP15O95972 392 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 BCRP11274 1271 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 FCER1AP12319 257 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 MAPK4P31152 587 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 SREBF1P36956 1147 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 USP11P51784 963 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 HTRA3P83110 453 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 CRHR2Q13324 411 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 KCTD2Q14681 263 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 LETM2Q2VYF4 491 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.56□□□□□ -0.4
TMEM260-208ENST00000555905 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
TMEM260-208ENST00000555905 CHAMP1Q96JM3 812 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 SPATA32Q96LK8 384 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 USP28Q96RU2 1077 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 MMP19Q99542 508 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 A1CFQ9NQ94 594 aaKnown RBP12.56□□□□□ -0.4
TMEM260-208ENST00000555905 POLR3EQ9NVU0 708 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 CLIC4Q9Y696 253 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 IVNS1ABPQ9Y6Y0 642 aa12.56□□□□□ -0.4
TMEM260-208ENST00000555905 FIBPO43427 364 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 CCNT1O60563 726 aaKnown RBP12.55□□□□□ -0.4
TMEM260-208ENST00000555905 YEATS4O95619 227 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 HSPA6P17066 643 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 MCM7P33993 719 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 ARHGAP4P98171 946 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 ORC2Q13416 577 aaPredicted RBP12.55□□□□□ -0.4
TMEM260-208ENST00000555905 NBR1Q14596 966 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 STK38Q15208 465 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 SF3A1Q15459 793 aaKnown RBP12.55□□□□□ -0.4
TMEM260-208ENST00000555905 ZNF174Q15697 407 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 ARHGEF16Q5VV41 709 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 C17orf99Q6UX52 265 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 NSUN6Q8TEA1 469 aaKnown RBP12.55□□□□□ -0.4
TMEM260-208ENST00000555905 RMDN3Q96TC7 470 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 FTOQ9C0B1 505 aaKnown RBP eCLIP12.55□□□□□ -0.4
TMEM260-208ENST00000555905 PORCNQ9H237 461 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 TSPYL2Q9H2G4 693 aaPredicted RBP12.55□□□□□ -0.4
TMEM260-208ENST00000555905 EFCC1Q9HA90 598 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 COL20A1Q9P218 1284 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 PCDHB6Q9Y5E3 794 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 PLXNB2O15031 1838 aa12.55□□□□□ -0.4
TMEM260-208ENST00000555905 ZNFX1Q9P2E3 1918 aaKnown RBP12.54□□□□□ -0.4
TMEM260-208ENST00000555905 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 STRNO43815 780 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 GCFC2P16383 781 aaKnown RBP12.54□□□□□ -0.4
TMEM260-208ENST00000555905 ZNF76P36508 570 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 NASPP49321 788 aaPredicted RBP12.54□□□□□ -0.4
TMEM260-208ENST00000555905 C1QTNF8P60827 252 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 SLC39A14Q15043 492 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 PPP4R3AQ6IN85 833 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 PLEKHH3Q7Z736 793 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 JMYQ8N9B5 988 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 DNERQ8NFT8 737 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 KCNG4Q8TDN1 519 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 LEO1Q8WVC0 666 aaPredicted RBP12.54□□□□□ -0.4
TMEM260-208ENST00000555905 TAAR1Q96RJ0 339 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 MPHOSPH6Q99547 160 aaKnown RBP12.54□□□□□ -0.4
TMEM260-208ENST00000555905 PXMP2Q9NR77 195 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.54□□□□□ -0.4
TMEM260-208ENST00000555905 ADD3Q9UEY8 706 aaKnown RBP12.54□□□□□ -0.4
TMEM260-208ENST00000555905 RCOR1Q9UKL0 485 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 RPTORQ8N122 1335 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 THSD7BQ9C0I4 1608 aa12.54□□□□□ -0.4
TMEM260-208ENST00000555905 DDX11L8A8MPP1 907 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 B4DLN1 442 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 SPTLC2O15270 562 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 NEMFO60524 1076 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 CYP3A4P08684 503 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 CCND2P30279 289 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 XRRA1Q6P2D8 792 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 MOXD1Q6UVY6 613 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 GPR142Q7Z601 462 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 ABRAQ8N0Z2 381 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 LINC00301Q8NCQ3 95 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 GDPD2Q9HCC8 539 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 DDX25Q9UHL0 483 aaKnown RBP12.53□□□□□ -0.4
TMEM260-208ENST00000555905 ELP1O95163 1332 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 FRMPD4Q14CM0 1322 aa12.53□□□□□ -0.4
TMEM260-208ENST00000555905 CYP3A7-CYP3A51PA0A087WV96 503 aa12.52□□□□□ -0.41
TMEM260-208ENST00000555905 GOLGA6L4A6NEF3 574 aa12.52□□□□□ -0.41
TMEM260-208ENST00000555905 LAD1O00515 517 aa12.52□□□□□ -0.41
TMEM260-208ENST00000555905 WNT7AO00755 349 aa12.52□□□□□ -0.41
TMEM260-208ENST00000555905 EIF2AK2P19525 551 aaKnown RBP12.52□□□□□ -0.41
TMEM260-208ENST00000555905 PTMSP20962 102 aa12.52□□□□□ -0.41
TMEM260-208ENST00000555905 CYP3A7P24462 503 aa12.52□□□□□ -0.41
TMEM260-208ENST00000555905 MCM4P33991 863 aa12.52□□□□□ -0.41
TMEM260-208ENST00000555905 ME1P48163 572 aa12.52□□□□□ -0.41
TMEM260-208ENST00000555905 UBXN2AP68543 259 aa12.52□□□□□ -0.41
TMEM260-208ENST00000555905 PTGDRQ13258 359 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms