RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ZBED3Q96IU2 234 aaPredicted RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 ARHGAP9Q9BRR9 750 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 RIOK1Q9BRS2 568 aaKnown RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 EPB41L4AQ9HCS5 686 aaPredicted RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 CD209Q9NNX6 404 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 PAK6Q9NQU5 681 aaPredicted RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 ANGEL1Q9UNK9 670 aaKnown RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 DDX49Q9Y6V7 483 aaKnown RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 MYO18BQ8IUG5 2567 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 MYH2Q9UKX2 1941 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 KLF18A0A0U1RQI7 1052 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 ANKRD33BA6NCL7 494 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 MINDY4BA8MYZ0 360 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 B4E1Z4 1266 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 H3BQV1 296 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 DXOO77932 396 aaKnown RBP7.91□□□□□ -1.14
SLIRP-204ENST00000555890 MBD3O95983 291 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 IRS1P35568 1242 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 NT5C2P49902 561 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 SEC13P55735 322 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 ANTXR2P58335 489 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 DYNLL1P63167 89 aaKnown RBP7.91□□□□□ -1.14
SLIRP-204ENST00000555890 CCT2P78371 535 aaKnown RBP7.91□□□□□ -1.14
SLIRP-204ENST00000555890 PPARAQ07869 468 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 KLHL40Q2TBA0 621 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 MSS51Q4VC12 460 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 CPLX2Q6PUV4 134 aaKnown RBP7.91□□□□□ -1.14
SLIRP-204ENST00000555890 NFXL1Q6ZNB6 911 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 ADGRA1Q86SQ6 560 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 NPAS4Q8IUM7 802 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 AMOTL1Q8IY63 956 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 SMARCC2Q8TAQ2 1214 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 STAG1Q8WVM7 1258 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 EYA3Q99504 573 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 MXD3Q9BW11 206 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 ZC3H12CQ9C0D7 883 aaKnown RBP7.91□□□□□ -1.14
SLIRP-204ENST00000555890 COA1Q9GZY4 146 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 TOMM22Q9NS69 142 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 ATP8A2Q9NTI2 1148 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 LMBRD1Q9NUN5 540 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 ANAPC4Q9UJX5 808 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 MTMR6Q9Y217 621 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 PCDHB3Q9Y5E6 796 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 DMXL1Q9Y485 3027 aa7.91□□□□□ -1.14
SLIRP-204ENST00000555890 COL4A6Q14031 1691 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 CCDC69A6NI79 296 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 GOLGA8BA8MQT2 603 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 SH2B2O14492 632 aaPredicted RBP7.9□□□□□ -1.14
SLIRP-204ENST00000555890 CPLX1O14810 134 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 IFIT3O14879 490 aaKnown RBP7.9□□□□□ -1.14
SLIRP-204ENST00000555890 CDKL5O76039 1030 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 CTGFP29279 349 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 PRDX5P30044 214 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 LIFRP42702 1097 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 PPP4CP60510 307 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 TAF1CQ15572 869 aaPredicted RBP7.9□□□□□ -1.14
SLIRP-204ENST00000555890 TMEM67Q5HYA8 995 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 RRP12Q5JTH9 1297 aaKnown RBP7.9□□□□□ -1.14
SLIRP-204ENST00000555890 CYB5R4Q7L1T6 521 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 TAS1R3Q7RTX0 852 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 ZBTB33Q86T24 672 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 SDR42E1Q8WUS8 393 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 ESR2Q92731 530 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 WNT2BQ93097 391 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 NUDT12Q9BQG2 462 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 ZSCAN16Q9H4T2 348 aaPredicted RBP7.9□□□□□ -1.14
SLIRP-204ENST00000555890 ARPP21Q9UBL0 812 aaPredicted RBP7.9□□□□□ -1.14
SLIRP-204ENST00000555890 PRKAG2Q9UGJ0 569 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 DOLKQ9UPQ8 538 aa7.9□□□□□ -1.14
SLIRP-204ENST00000555890 ABCA12Q86UK0 2595 aa7.9□□□□□ -1.15
SLIRP-204ENST00000555890 NEDD4P46934 1319 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 ADGRA2Q96PE1 1338 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.89□□□□□ -1.15
SLIRP-204ENST00000555890 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.89□□□□□ -1.15
SLIRP-204ENST00000555890 PTPDC1A2A3K4 754 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 ZBTB43O43298 467 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 JAK2O60674 1132 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 PRMT3O60678 531 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 WDHD1O75717 1129 aaPredicted RBP7.89□□□□□ -1.15
SLIRP-204ENST00000555890 DKK1O94907 266 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 TCF3P15923 654 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 USP5P45974 858 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 METAP2P50579 478 aaKnown RBP eCLIP7.89□□□□□ -1.157e-8■□□□□ 9.9
SLIRP-204ENST00000555890 WTAPQ15007 396 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 SBK1Q52WX2 424 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 DACT2Q5SW24 774 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 L1TD1Q5T7N2 865 aaKnown RBP7.89□□□□□ -1.15
SLIRP-204ENST00000555890 SGMS1Q86VZ5 419 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 MICALL1Q8N3F8 863 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 NSUN7Q8NE18 718 aaKnown RBP7.89□□□□□ -1.15
SLIRP-204ENST00000555890 IGDCC4Q8TDY8 1250 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 ZNF384Q8TF68 577 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 SYAP1Q96A49 352 aaPredicted RBP7.89□□□□□ -1.15
SLIRP-204ENST00000555890 DDX11Q96FC9 970 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 UBAC1Q9BSL1 405 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 AATFQ9NY61 560 aaKnown RBP eCLIP7.89□□□□□ -1.15
SLIRP-204ENST00000555890 ZSWIM5Q9P217 1185 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 BRPF3Q9ULD4 1205 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 ISY1Q9ULR0 285 aaKnown RBP7.89□□□□□ -1.15
SLIRP-204ENST00000555890 SUGT1Q9Y2Z0 365 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms