RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 VWCEQ96DN2 955 aa10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 TAAR1Q96RJ0 339 aa10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 WDR11Q9BZH6 1224 aa10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 PNMA2Q9UL42 364 aa10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 Q9Y3F1 56 aa10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 MROH7Q68CQ1 1323 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 DCDC2CA8MYV0 355 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 RBAK-RBAKDNI3L0D1 243 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 B4GALT4O60513 344 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 TIMP1P01033 207 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 PURAQ00577 322 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 FPGSQ05932 587 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 ITGA7Q13683 1181 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 CCDC62Q6P9F0 684 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 FBXO11Q86XK2 927 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 PPP1R13LQ8WUF5 828 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 RUFY2Q8WXA3 655 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 ESYT1Q9BSJ8 1104 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 PPP1R12CQ9BZL4 782 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 WNT8AQ9H1J5 351 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 LY9Q9HBG7 655 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 KIAA1217Q5T5P2 1943 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 REV3LO60673 3130 aa10.85□□□□□ -0.67
VIPAS39-207ENST00000555854 IFIT3O14879 490 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 ZBTB5O15062 677 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 RGS20O76081 388 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 HSD17B4P51659 736 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 PDE4DQ08499 809 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 PPP2R5BQ15173 497 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 RASIP1Q5U651 963 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 MFSD5Q6N075 450 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 OR6J1Q8NGC5 347 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 NCOA7Q8NI08 942 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 IL31RAQ8NI17 732 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 IGDCC4Q8TDY8 1250 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 RNPC3Q96LT9 517 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 PIGSQ96S52 555 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 MYL10Q9BUA6 226 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 NOC4LQ9BVI4 516 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 AP5M1Q9H0R1 490 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 TRPV6Q9H1D0 765 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 TTYH1Q9H313 450 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 RIOX1Q9H6W3 641 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 TANC1Q9C0D5 1861 aa10.84□□□□□ -0.67
VIPAS39-207ENST00000555854 SH2B2O14492 632 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 SLC27A2O14975 620 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 DHX16O60231 1041 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 CABYRO75952 493 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 CSF2RAP15509 400 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 EIF2AK2P19525 551 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 CYP2C18P33260 490 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 ARHGAP1Q07960 439 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 TRDNQ13061 729 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 WTAPQ15007 396 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 TMEM240Q5SV17 173 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 RALYLQ86SE5 291 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 HOMER1Q86YM7 354 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 SCFD2Q8WU76 684 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 VTI1AQ96AJ9 217 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 FAM161BQ96MY7 647 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 AMNQ9BXJ7 453 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 MAF1Q9H063 256 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 ALDH8A1Q9H2A2 487 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 PXMP2Q9NR77 195 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 TRMT13Q9NUP7 481 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 MRPL11Q9Y3B7 192 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 MUC3AQ02505 3323 aa10.83□□□□□ -0.68
VIPAS39-207ENST00000555854 A6NJR5 290 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 PLEKHA8P1O95397 391 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 CFBP00751 764 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 MYL3P08590 195 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 ACRP10323 421 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 TXNP10599 105 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 CD44P16070 742 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 HOXA13P31271 388 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 SMAD3P84022 425 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 BMP2KLQ5H9B9 411 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 TMEM67Q5HYA8 995 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 CREB3L3Q68CJ9 461 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 CTAGE1Q96RT6 745 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 RMDN3Q96TC7 470 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 STXBP5LQ9Y2K9 1186 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 FARP1Q9Y4F1 1045 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 SCN5AQ14524 2016 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 FRMPD4Q14CM0 1322 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 XIRP2A4UGR9 3374 aa10.82□□□□□ -0.68
VIPAS39-207ENST00000555854 NKRFO15226 690 aaKnown RBP eCLIP10.81□□□□□ -0.68
VIPAS39-207ENST00000555854 TLR3O15455 904 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-207ENST00000555854 PRC1O43663 620 aa10.81□□□□□ -0.68
VIPAS39-207ENST00000555854 ZEB2O60315 1214 aa10.81□□□□□ -0.68
VIPAS39-207ENST00000555854 MMP3P08254 477 aa10.81□□□□□ -0.68
VIPAS39-207ENST00000555854 CYP2C9P11712 490 aa10.81□□□□□ -0.68
VIPAS39-207ENST00000555854 CPT1AP50416 773 aa10.81□□□□□ -0.68
VIPAS39-207ENST00000555854 CCL23P55773 120 aa10.81□□□□□ -0.68
VIPAS39-207ENST00000555854 TTLL4Q14679 1199 aa10.81□□□□□ -0.68
VIPAS39-207ENST00000555854 NECTIN1Q15223 517 aa10.81□□□□□ -0.68
VIPAS39-207ENST00000555854 LY6KQ17RY6 165 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms