RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 MCM3APO60318 1980 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 LOC102724159A0A0B4J2E5 919 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 M0R2N6 131 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 NEMFO60524 1076 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 CCNT1O60563 726 aaKnown RBP12.73□□□□□ -0.37
SHMT2-220ENST00000555634 CNMDO75829 334 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 STAM2O75886 525 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 YEATS4O95619 227 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 ATP2B1P20020 1258 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 CCND2P30279 289 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 SREBF1P36956 1147 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 USP11P51784 963 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 ARHGAP4P98171 946 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 DNM1Q05193 864 aaKnown RBP12.73□□□□□ -0.37
SHMT2-220ENST00000555634 BAATQ14032 418 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-220ENST00000555634 PWP2Q15269 919 aaKnown RBP12.73□□□□□ -0.37
SHMT2-220ENST00000555634 NPY5RQ15761 445 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 TMEM266Q2M3C6 531 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 GNPTABQ3T906 1256 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 XRRA1Q6P2D8 792 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
SHMT2-220ENST00000555634 PLEKHH3Q7Z736 793 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 TNFRSF25Q93038 417 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 TXNRD2Q9NNW7 524 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 POLR3EQ9NVU0 708 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 ZDHHC9Q9Y397 364 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 RIPK3Q9Y572 518 aa12.73□□□□□ -0.37
SHMT2-220ENST00000555634 TNPO2O14787 897 aaKnown RBP12.72□□□□□ -0.37
SHMT2-220ENST00000555634 OPLAHO14841 1288 aa12.72□□□□□ -0.37
SHMT2-220ENST00000555634 BAG4O95429 457 aaKnown RBP12.72□□□□□ -0.37
SHMT2-220ENST00000555634 TAL1P17542 331 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-220ENST00000555634 MCM7P33993 719 aa12.72□□□□□ -0.37
SHMT2-220ENST00000555634 CEBPZQ03701 1054 aaKnown RBP12.72□□□□□ -0.37
SHMT2-220ENST00000555634 ANO1Q5XXA6 986 aa12.72□□□□□ -0.37
SHMT2-220ENST00000555634 MOXD1Q6UVY6 613 aa12.72□□□□□ -0.37
SHMT2-220ENST00000555634 DPP9Q86TI2 863 aa12.72□□□□□ -0.37
SHMT2-220ENST00000555634 SYTL5Q8TDW5 730 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-220ENST00000555634 IWS1Q96ST2 819 aa12.72□□□□□ -0.37
SHMT2-220ENST00000555634 FRMPD4Q14CM0 1322 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 SLC15A5A6NIM6 579 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 ASB14A6NK59 587 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 BCRP11274 1271 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 EIF2AK2P19525 551 aaKnown RBP12.71□□□□□ -0.37
SHMT2-220ENST00000555634 TXLNAP40222 546 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 ME1P48163 572 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 PDE4DQ08499 809 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 PCNX4Q63HM2 1172 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 GPR142Q7Z601 462 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 SHISA4Q96DD7 197 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 CDHR1Q96JP9 859 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 PGBD1Q96JS3 809 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 CFHR5Q9BXR6 569 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 EFCC1Q9HA90 598 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 PXMP2Q9NR77 195 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 RTEL1Q9NZ71 1219 aa12.71□□□□□ -0.37
SHMT2-220ENST00000555634 DDX25Q9UHL0 483 aaKnown RBP12.71□□□□□ -0.37
SHMT2-220ENST00000555634 ELP1O95163 1332 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 RPTORQ8N122 1335 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 TRPA1O75762 1119 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 ADORA2AP29274 412 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 RGS2P41220 211 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 STXBP2Q15833 593 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 CALCRLQ16602 461 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 PPP4R3AQ6IN85 833 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 C17orf99Q6UX52 265 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 NLRX1Q86UT6 975 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 SLFN12Q8IYM2 578 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 FERMT2Q96AC1 680 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 ERO1AQ96HE7 468 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 NUDT12Q9BQG2 462 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 PORCNQ9H237 461 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 CNPY2Q9Y2B0 182 aa12.7□□□□□ -0.38
SHMT2-220ENST00000555634 ZSWIM8A7E2V4 1837 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 SPTLC2O15270 562 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 GNRH1P01148 92 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 CYP3A4P08684 503 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 OR52Z1P0C646 297 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 MYCLP12524 364 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-220ENST00000555634 PTPREP23469 700 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 HOXD10P28358 340 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 NASPP49321 788 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-220ENST00000555634 ALDH5A1P51649 535 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-220ENST00000555634 HTRA3P83110 453 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 LACTBP83111 547 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-220ENST00000555634 SP3Q02447 781 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 GRB14Q14449 540 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 PGM5Q15124 567 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 COL13A1Q5TAT6 717 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-220ENST00000555634 FAM173BQ6P4H8 233 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 NIPA1Q7RTP0 329 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 USP28Q96RU2 1077 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 APBA2Q99767 749 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 PDCD2LQ9BRP1 358 aa12.69□□□□□ -0.38
SHMT2-220ENST00000555634 DOCK5Q9H7D0 1870 aa12.68□□□□□ -0.38
SHMT2-220ENST00000555634 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
SHMT2-220ENST00000555634 TBX3O15119 743 aa12.68□□□□□ -0.38
SHMT2-220ENST00000555634 PPP6R2O75170 966 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms