RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 PLEKHM2Q8IWE5 1019 aa26.05■■□□□ 1.76
GABRB3-206ENST00000554556 PNMA1Q8ND90 353 aa26.05■■□□□ 1.76
GABRB3-206ENST00000554556 PPM1EQ8WY54 764 aa26.05■■□□□ 1.76
GABRB3-206ENST00000554556 SCN10AQ9Y5Y9 1956 aa26.05■■□□□ 1.76
GABRB3-206ENST00000554556 A6NJR5 290 aa26.04■■□□□ 1.76
GABRB3-206ENST00000554556 PTPN11Q06124 597 aaPredicted RBP26.04■■□□□ 1.76
GABRB3-206ENST00000554556 CWC27Q6UX04 472 aaKnown RBP26.04■■□□□ 1.76
GABRB3-206ENST00000554556 ANKS1AQ92625 1134 aa26.04■■□□□ 1.76
GABRB3-206ENST00000554556 ABCB11O95342 1321 aa26.04■■□□□ 1.76
GABRB3-206ENST00000554556 KDM4AO75164 1064 aa26.03■■□□□ 1.76
GABRB3-206ENST00000554556 ACTN1P12814 892 aa26.03■■□□□ 1.76
GABRB3-206ENST00000554556 IGFBP4P22692 258 aa26.03■■□□□ 1.76
GABRB3-206ENST00000554556 CDC37Q16543 378 aaPredicted RBP26.03■■□□□ 1.76
GABRB3-206ENST00000554556 ASPRV1Q53RT3 343 aa26.03■■□□□ 1.76
GABRB3-206ENST00000554556 MCF2L2Q86YR7 1114 aa26.03■■□□□ 1.76
GABRB3-206ENST00000554556 RETREG2Q8NC44 543 aa26.03■■□□□ 1.76
GABRB3-206ENST00000554556 YBX2Q9Y2T7 364 aaKnown RBP26.03■■□□□ 1.76
GABRB3-206ENST00000554556 PCDHA11Q9Y5I1 949 aa26.03■■□□□ 1.76
GABRB3-206ENST00000554556 MYH6P13533 1939 aa26.03■■□□□ 1.76
GABRB3-206ENST00000554556 LAMA4Q16363 1823 aa26.02■■□□□ 1.76
GABRB3-206ENST00000554556 RFC2P35250 354 aa26.02■■□□□ 1.76
GABRB3-206ENST00000554556 NUCB1Q02818 461 aa26.02■■□□□ 1.76
GABRB3-206ENST00000554556 IMMTQ16891 758 aaKnown RBP26.02■■□□□ 1.76
GABRB3-206ENST00000554556 COPS5Q92905 334 aa26.02■■□□□ 1.76
GABRB3-206ENST00000554556 CTNNA3Q9UI47 895 aa26.02■■□□□ 1.76
GABRB3-206ENST00000554556 B4E1Z4 1266 aa26.01■■□□□ 1.75
GABRB3-206ENST00000554556 ATP2A2P16615 1042 aaKnown RBP26.01■■□□□ 1.75
GABRB3-206ENST00000554556 RABGGTBP53611 331 aa26.01■■□□□ 1.75
GABRB3-206ENST00000554556 DEFB128Q7Z7B8 93 aa26.01■■□□□ 1.75
GABRB3-206ENST00000554556 ADGRF4Q8IZF3 695 aa26.01■■□□□ 1.75
GABRB3-206ENST00000554556 NSUN6Q8TEA1 469 aaKnown RBP26.01■■□□□ 1.75
GABRB3-206ENST00000554556 ATXN2LQ8WWM7 1075 aaKnown RBP26.01■■□□□ 1.75
GABRB3-206ENST00000554556 ZSCAN10Q96SZ4 725 aaPredicted RBP26.01■■□□□ 1.75
GABRB3-206ENST00000554556 DSCC1Q9BVC3 393 aa26.01■■□□□ 1.75
GABRB3-206ENST00000554556 CPVLQ9H3G5 476 aa26.01■■□□□ 1.75
GABRB3-206ENST00000554556 NOD1Q9Y239 953 aa26.01■■□□□ 1.75
GABRB3-206ENST00000554556 PITPNM1O00562 1244 aa26■■□□□ 1.75
GABRB3-206ENST00000554556 DHX16O60231 1041 aaKnown RBP26■■□□□ 1.75
GABRB3-206ENST00000554556 BFSP2Q13515 415 aa26■■□□□ 1.75
GABRB3-206ENST00000554556 PPP2R2DQ66LE6 453 aa26■■□□□ 1.75
GABRB3-206ENST00000554556 IWS1Q96ST2 819 aa26■■□□□ 1.75
GABRB3-206ENST00000554556 KRT23Q9C075 422 aa26■■□□□ 1.75
GABRB3-206ENST00000554556 ZSWIM5Q9P217 1185 aa26■■□□□ 1.75
GABRB3-206ENST00000554556 MRPL11Q9Y3B7 192 aaKnown RBP26■■□□□ 1.75
GABRB3-206ENST00000554556 SCN5AQ14524 2016 aa25.99■■□□□ 1.75
GABRB3-206ENST00000554556 PARP1P09874 1014 aaKnown RBP25.99■■□□□ 1.75
GABRB3-206ENST00000554556 ADGRE1Q14246 886 aa25.99■■□□□ 1.75
GABRB3-206ENST00000554556 STXBP2Q15833 593 aa25.99■■□□□ 1.75
GABRB3-206ENST00000554556 VWCEQ96DN2 955 aa25.99■■□□□ 1.75
GABRB3-206ENST00000554556 TAAR1Q96RJ0 339 aa25.99■■□□□ 1.75
GABRB3-206ENST00000554556 CNNM2Q9H8M5 875 aa25.99■■□□□ 1.75
GABRB3-206ENST00000554556 THEGQ9P2T0 379 aa25.99■■□□□ 1.75
GABRB3-206ENST00000554556 GH1P01241 217 aa25.98■■□□□ 1.75
GABRB3-206ENST00000554556 IGHDP01880 384 aa25.98■■□□□ 1.75
GABRB3-206ENST00000554556 IQCF3P0C7M6 154 aa25.98■■□□□ 1.75
GABRB3-206ENST00000554556 CCDC62Q6P9F0 684 aa25.98■■□□□ 1.75
GABRB3-206ENST00000554556 SEPT14Q6ZU15 432 aa25.98■■□□□ 1.75
GABRB3-206ENST00000554556 FBXO11Q86XK2 927 aa25.98■■□□□ 1.75
GABRB3-206ENST00000554556 ENAHQ8N8S7 591 aaPredicted RBP25.98■■□□□ 1.75
GABRB3-206ENST00000554556 SYTL5Q8TDW5 730 aaPredicted RBP25.98■■□□□ 1.75
GABRB3-206ENST00000554556 TBC1D5Q92609 795 aa25.98■■□□□ 1.75
GABRB3-206ENST00000554556 PRDM6Q9NQX0 595 aa25.98■■□□□ 1.75
GABRB3-206ENST00000554556 EYSQ5T1H1 3165 aa25.98■■□□□ 1.75
GABRB3-206ENST00000554556 KIAA1217Q5T5P2 1943 aa25.98■■□□□ 1.75
GABRB3-206ENST00000554556 ARIH2O95376 493 aa25.97■■□□□ 1.75
GABRB3-206ENST00000554556 CHMP4BP1P59074 171 aa25.97■■□□□ 1.75
GABRB3-206ENST00000554556 CCDC85BQ15834 202 aaPredicted RBP25.97■■□□□ 1.75
GABRB3-206ENST00000554556 QRICH1Q2TAL8 776 aa25.97■■□□□ 1.75
GABRB3-206ENST00000554556 TMEM67Q5HYA8 995 aa25.97■■□□□ 1.75
GABRB3-206ENST00000554556 CCDC155Q8N6L0 562 aa25.97■■□□□ 1.75
GABRB3-206ENST00000554556 RMDN3Q96TC7 470 aa25.97■■□□□ 1.75
GABRB3-206ENST00000554556 UBAC1Q9BSL1 405 aa25.97■■□□□ 1.75
GABRB3-206ENST00000554556 FTOQ9C0B1 505 aaKnown RBP eCLIP25.97■■□□□ 1.75
GABRB3-206ENST00000554556 TSPYL2Q9H2G4 693 aaPredicted RBP25.97■■□□□ 1.75
GABRB3-206ENST00000554556 VAT1LQ9HCJ6 419 aa25.97■■□□□ 1.75
GABRB3-206ENST00000554556 PRUNE2Q8WUY3 3088 aa25.96■■□□□ 1.75
GABRB3-206ENST00000554556 CASTP20810 708 aaKnown RBP25.96■■□□□ 1.75
GABRB3-206ENST00000554556 ARHGEF16Q5VV41 709 aa25.96■■□□□ 1.75
GABRB3-206ENST00000554556 PHOSPHO2Q8TCD6 241 aa25.96■■□□□ 1.75
GABRB3-206ENST00000554556 AFG1LQ8WV93 481 aa25.96■■□□□ 1.75
GABRB3-206ENST00000554556 SLC9A7Q96T83 725 aa25.96■■□□□ 1.75
GABRB3-206ENST00000554556 TRIP12Q14669 1992 aaPredicted RBP25.96■■□□□ 1.75
GABRB3-206ENST00000554556 CDH23Q9H251 3354 aa25.96■■□□□ 1.75
GABRB3-206ENST00000554556 MYOGP15173 224 aa25.95■■□□□ 1.74
GABRB3-206ENST00000554556 LY6KQ17RY6 165 aa25.95■■□□□ 1.74
GABRB3-206ENST00000554556 PPP1R13LQ8WUF5 828 aa25.95■■□□□ 1.74
GABRB3-206ENST00000554556 JMJD4Q9H9V9 463 aa25.95■■□□□ 1.74
GABRB3-206ENST00000554556 MMP3P08254 477 aa25.94■■□□□ 1.74
GABRB3-206ENST00000554556 MRPS5P82675 430 aaKnown RBP25.94■■□□□ 1.74
GABRB3-206ENST00000554556 PTGISQ16647 500 aa25.94■■□□□ 1.74
GABRB3-206ENST00000554556 IFIT1BQ5T764 474 aaKnown RBP25.94■■□□□ 1.74
GABRB3-206ENST00000554556 CAGE1Q8TC20 777 aa25.94■■□□□ 1.74
GABRB3-206ENST00000554556 ASB2Q96Q27 587 aa25.94■■□□□ 1.74
GABRB3-206ENST00000554556 COL20A1Q9P218 1284 aa25.94■■□□□ 1.74
GABRB3-206ENST00000554556 KIF28PB7ZC32 967 aa25.93■■□□□ 1.74
GABRB3-206ENST00000554556 EIF3JO75822 258 aaKnown RBP25.93■■□□□ 1.74
GABRB3-206ENST00000554556 ARHGAP1Q07960 439 aa25.93■■□□□ 1.74
GABRB3-206ENST00000554556 DGKDQ16760 1214 aa25.93■■□□□ 1.74
GABRB3-206ENST00000554556 CHST3Q7LGC8 479 aa25.93■■□□□ 1.74
GABRB3-206ENST00000554556 SESTD1Q86VW0 696 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms