RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 RBPJLQ9UBG7 517 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 RIPK3Q9Y572 518 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 DDX49Q9Y6V7 483 aaKnown RBP11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 MYH6P13533 1939 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 PFASO15067 1338 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 ADAMTS3O15072 1205 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 NEMFO60524 1076 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 CUTAO60888 179 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 ALDH1A1P00352 501 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 TAL1P17542 331 aaPredicted RBP11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 SREBF1P36956 1147 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 RPS6P62753 249 aaKnown RBP11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 ERVK-9P63128 1117 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 ERVK-24P63145 666 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 ARHGAP4P98171 946 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 PTGDRQ13258 359 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 BAATQ14032 418 aaPredicted RBP11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 NBR1Q14596 966 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 KCTD2Q14681 263 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 TAF1CQ15572 869 aaPredicted RBP11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 TPRNQ4KMQ1 711 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 NOM1Q5C9Z4 860 aaKnown RBP11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 WDR78Q5VTH9 848 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 ARHGEF16Q5VV41 709 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 PPP4R3AQ6IN85 833 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 MOXD1Q6UVY6 613 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 KRI1Q8N9T8 703 aaKnown RBP11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 SHCBP1Q8NEM2 672 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 TBC1D5Q92609 795 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 MPHOSPH6Q99547 160 aaKnown RBP11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 PTPN18Q99952 460 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 MOV10L1Q9BXT6 1211 aaKnown RBP11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 ZFYVE28Q9HCC9 887 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 MORC2Q9Y6X9 1032 aaPredicted RBP11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 TRPM7Q96QT4 1865 aa11.88□□□□□ -0.51
TMEM55B-205ENST00000554028 FAM155AB1AL88 458 aaPredicted RBP11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 CYP3A4P08684 503 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 ERCC3P19447 782 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 MARCKSP29966 332 aaPredicted RBP11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 TM4SF4P48230 202 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 PTPAQ15257 358 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 ARL6IP4Q66PJ3 421 aaKnown RBP11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 ADALQ6DHV7 355 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 XRRA1Q6P2D8 792 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 DTHD1Q6ZMT9 781 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 ANKRD13CQ8N6S4 541 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 SYTL5Q8TDW5 730 aaPredicted RBP11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 RMDN3Q96TC7 470 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 ANP32EQ9BTT0 268 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 RAB34Q9BZG1 259 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 MORF4L1Q9UBU8 362 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 ADD3Q9UEY8 706 aaKnown RBP11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 DDX25Q9UHL0 483 aaKnown RBP11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 SRPRBQ9Y5M8 271 aaKnown RBP11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 IVNS1ABPQ9Y6Y0 642 aa11.87□□□□□ -0.51
TMEM55B-205ENST00000554028 RASSF10A6NK89 507 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 POTEB2H3BUK9 544 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 TRAK2O60296 914 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 CNMDO75829 334 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 OR52Z1P0C646 297 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 FCER1AP12319 257 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 PRPHP41219 470 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 ATP2C1P98194 919 aaPredicted RBP11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 CALCRLQ16602 461 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 TMEM266Q2M3C6 531 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 CYP4F22Q6NT55 531 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 CCDC73Q6ZRK6 1079 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 NSUN6Q8TEA1 469 aaKnown RBP11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 SYAP1Q96A49 352 aaPredicted RBP11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 CAPNS2Q96L46 248 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 MMP19Q99542 508 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 TXNRD2Q9NNW7 524 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 A1CFQ9NQ94 594 aaKnown RBP11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 FAM13BQ9NYF5 915 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 CYP39A1Q9NYL5 469 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 PCDHA7Q9UN72 937 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 LOC285556D6RIA3 1793 aa11.86□□□□□ -0.51
TMEM55B-205ENST00000554028 CYP3A7-CYP3A51PA0A087WV96 503 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 A0A1W2PQ27 194 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 A0A1W2PQ64 194 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 A0A1W2PQD8 194 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 IGF2BP3O00425 579 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 STRNO43815 780 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 PTPREP23469 700 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 CYP3A7P24462 503 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 CCND2P30279 289 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 MAPK4P31152 587 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 CIITAP33076 1130 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 TXLNAP40222 546 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 FAM110CQ1W6H9 321 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 Q3C1V9 767 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 SLC30A10Q6XR72 485 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 SLFN12Q8IYM2 578 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 ZNF579Q8NAF0 562 aaKnown RBP11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 DNERQ8NFT8 737 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 TAAR1Q96RJ0 339 aa11.85□□□□□ -0.51
TMEM55B-205ENST00000554028 VWA3AA6NCI4 1184 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 TBX3O15119 743 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms